RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 TRAPPC10P48553 1259 aa17.95■□□□□ 0.46
RGP1-201ENST00000378078 CLNS1AP54105 237 aaKnown RBP17.95■□□□□ 0.46
RGP1-201ENST00000378078 EXT2Q93063 718 aa17.95■□□□□ 0.46
RGP1-201ENST00000378078 IFT140Q96RY7 1462 aa17.95■□□□□ 0.46
RGP1-201ENST00000378078 NPATQ14207 1427 aa17.95■□□□□ 0.46
RGP1-201ENST00000378078 CYP4A11Q02928 519 aa17.94■□□□□ 0.46
RGP1-201ENST00000378078 DCAF5Q96JK2 942 aa17.94■□□□□ 0.46
RGP1-201ENST00000378078 ZBED2Q9BTP6 218 aa17.94■□□□□ 0.46
RGP1-201ENST00000378078 XAB2Q9HCS7 855 aaKnown RBP17.94■□□□□ 0.46
RGP1-201ENST00000378078 KCNK3O14649 394 aa17.94■□□□□ 0.46
RGP1-201ENST00000378078 COG7P83436 770 aa17.94■□□□□ 0.46
RGP1-201ENST00000378078 FANCCQ00597 558 aa17.94■□□□□ 0.46
RGP1-201ENST00000378078 EYA1Q99502 592 aa17.94■□□□□ 0.46
RGP1-201ENST00000378078 SLITRK6Q9H5Y7 841 aa17.94■□□□□ 0.46
RGP1-201ENST00000378078 USH1CQ9Y6N9 552 aa17.94■□□□□ 0.46
RGP1-201ENST00000378078 SYNJ1O43426 1573 aa17.94■□□□□ 0.46
RGP1-201ENST00000378078 TLR3O15455 904 aaKnown RBP17.94■□□□□ 0.46
RGP1-201ENST00000378078 PTPN21Q16825 1174 aa17.94■□□□□ 0.46
RGP1-201ENST00000378078 ZBTB8OSQ8IWT0 167 aa17.94■□□□□ 0.46
RGP1-201ENST00000378078 NCAPGQ9BPX3 1015 aa17.94■□□□□ 0.46
RGP1-201ENST00000378078 KCTD1Q719H9 257 aa17.94■□□□□ 0.46
RGP1-201ENST00000378078 NLRP7Q8WX94 980 aa17.94■□□□□ 0.46
RGP1-201ENST00000378078 SERPINB6P35237 376 aa17.94■□□□□ 0.46
RGP1-201ENST00000378078 DIS3L2Q8IYB7 885 aaKnown RBP17.94■□□□□ 0.46
RGP1-201ENST00000378078 SUPT20HQ8NEM7 779 aa17.94■□□□□ 0.46
RGP1-201ENST00000378078 PCF11O94913 1555 aaKnown RBP17.94■□□□□ 0.46
RGP1-201ENST00000378078 CHMLP26374 656 aa17.94■□□□□ 0.46
RGP1-201ENST00000378078 C7orf31Q8N865 590 aa17.94■□□□□ 0.46
RGP1-201ENST00000378078 VCXQ9H320 206 aa17.94■□□□□ 0.46
RGP1-201ENST00000378078 PLCB1Q9NQ66 1216 aa17.94■□□□□ 0.46
RGP1-201ENST00000378078 CCPG1Q9ULG6 757 aa17.94■□□□□ 0.46
RGP1-201ENST00000378078 G3BP2Q9UN86 482 aaKnown RBP17.94■□□□□ 0.46
RGP1-201ENST00000378078 PCDHB4Q9Y5E5 795 aa17.93■□□□□ 0.46
RGP1-201ENST00000378078 RPS6KA1Q15418 735 aa17.93■□□□□ 0.46
RGP1-201ENST00000378078 EDC3Q96F86 508 aaKnown RBP17.93■□□□□ 0.46
RGP1-201ENST00000378078 ADPGKQ9BRR6 497 aa17.93■□□□□ 0.46
RGP1-201ENST00000378078 MAST3O60307 1309 aa17.93■□□□□ 0.46
RGP1-201ENST00000378078 F5H423 210 aaPredicted RBP17.93■□□□□ 0.46
RGP1-201ENST00000378078 SGK1O00141 431 aa17.93■□□□□ 0.46
RGP1-201ENST00000378078 ALDH1B1P30837 517 aa17.93■□□□□ 0.46
RGP1-201ENST00000378078 LGSNQ5TDP6 509 aa17.93■□□□□ 0.46
RGP1-201ENST00000378078 JAK2O60674 1132 aa17.93■□□□□ 0.46
RGP1-201ENST00000378078 BAG6P46379 1132 aa17.93■□□□□ 0.46
RGP1-201ENST00000378078 POSTNQ15063 836 aa17.93■□□□□ 0.46
RGP1-201ENST00000378078 TRIM37O94972 964 aa17.93■□□□□ 0.46
RGP1-201ENST00000378078 CERKLQ49MI3 558 aaPredicted RBP17.93■□□□□ 0.46
RGP1-201ENST00000378078 PPM1KQ8N3J5 372 aa17.93■□□□□ 0.46
RGP1-201ENST00000378078 RSRC2Q7L4I2 434 aaKnown RBP17.92■□□□□ 0.46
RGP1-201ENST00000378078 DDX25Q9UHL0 483 aaKnown RBP17.92■□□□□ 0.46
RGP1-201ENST00000378078 ABCC1P33527 1531 aa17.92■□□□□ 0.46
RGP1-201ENST00000378078 POC1B-GALNT4F8VUJ3 575 aa17.92■□□□□ 0.46
RGP1-201ENST00000378078 DMP1Q13316 513 aaPredicted RBP17.92■□□□□ 0.46
RGP1-201ENST00000378078 MIGA2Q7L4E1 593 aa17.92■□□□□ 0.46
RGP1-201ENST00000378078 TIAM1Q13009 1591 aa17.92■□□□□ 0.46
RGP1-201ENST00000378078 CACNB1Q02641 598 aaPredicted RBP17.92■□□□□ 0.46
RGP1-201ENST00000378078 TEKT1Q969V4 418 aa17.92■□□□□ 0.46
RGP1-201ENST00000378078 A6NJR5 290 aa17.92■□□□□ 0.46
RGP1-201ENST00000378078 LMNTD2Q8IXW0 634 aa17.92■□□□□ 0.46
RGP1-201ENST00000378078 PSTPIP2Q9H939 334 aa17.92■□□□□ 0.46
RGP1-201ENST00000378078 ANLNQ9NQW6 1124 aa17.92■□□□□ 0.46
RGP1-201ENST00000378078 TMEM191BP0C7N4 346 aa17.92■□□□□ 0.46
RGP1-201ENST00000378078 ATICP31939 592 aa17.92■□□□□ 0.46
RGP1-201ENST00000378078 SLC9A5Q14940 896 aa17.92■□□□□ 0.46
RGP1-201ENST00000378078 GNPTABQ3T906 1256 aa17.92■□□□□ 0.46
RGP1-201ENST00000378078 LINS1Q8NG48 757 aa17.92■□□□□ 0.46
RGP1-201ENST00000378078 FTOQ9C0B1 505 aaKnown RBP eCLIP17.92■□□□□ 0.46
RGP1-201ENST00000378078 ATP1A2P50993 1020 aa17.92■□□□□ 0.46
RGP1-201ENST00000378078 PRPSAP1Q14558 356 aa17.92■□□□□ 0.46
RGP1-201ENST00000378078 PCIF1Q9H4Z3 704 aa17.92■□□□□ 0.46
RGP1-201ENST00000378078 ZNF202O95125 648 aa17.91■□□□□ 0.46
RGP1-201ENST00000378078 IQCB1Q15051 598 aa17.91■□□□□ 0.46
RGP1-201ENST00000378078 ELF2Q15723 593 aa17.91■□□□□ 0.46
RGP1-201ENST00000378078 CCNYQ8ND76 341 aa17.91■□□□□ 0.46
RGP1-201ENST00000378078 PHACTR3Q96KR7 559 aa17.91■□□□□ 0.46
RGP1-201ENST00000378078 BAG5Q9UL15 447 aa17.91■□□□□ 0.46
RGP1-201ENST00000378078 MYL3P08590 195 aa17.91■□□□□ 0.46
RGP1-201ENST00000378078 RCN2Q14257 317 aa17.91■□□□□ 0.46
RGP1-201ENST00000378078 FANCAO15360 1455 aa17.91■□□□□ 0.46
RGP1-201ENST00000378078 TTC41PQ6P2S7 1318 aa17.91■□□□□ 0.46
RGP1-201ENST00000378078 MGEA5O60502 916 aa17.91■□□□□ 0.46
RGP1-201ENST00000378078 POLR2MP0CAP2 368 aa17.91■□□□□ 0.46
RGP1-201ENST00000378078 STX2P32856 288 aa17.91■□□□□ 0.46
RGP1-201ENST00000378078 MAGEA1P43355 309 aa17.91■□□□□ 0.46
RGP1-201ENST00000378078 BCAMP50895 628 aa17.91■□□□□ 0.46
RGP1-201ENST00000378078 CFAP36Q96G28 342 aa17.91■□□□□ 0.46
RGP1-201ENST00000378078 GNGT2O14610 69 aa17.91■□□□□ 0.46
RGP1-201ENST00000378078 THAP12O43422 761 aa17.91■□□□□ 0.46
RGP1-201ENST00000378078 PDE6CP51160 858 aa17.91■□□□□ 0.46
RGP1-201ENST00000378078 RBM46Q8TBY0 533 aaKnown RBP17.91■□□□□ 0.46
RGP1-201ENST00000378078 ANGEL1Q9UNK9 670 aaKnown RBP17.91■□□□□ 0.46
RGP1-201ENST00000378078 ANKRD20A3Q5VUR7 823 aa17.91■□□□□ 0.46
RGP1-201ENST00000378078 ZNF790Q6PG37 636 aa17.91■□□□□ 0.46
RGP1-201ENST00000378078 SUCLG2Q96I99 432 aa17.91■□□□□ 0.46
RGP1-201ENST00000378078 SERTAD1Q9UHV2 236 aa17.91■□□□□ 0.46
RGP1-201ENST00000378078 SCAF11Q99590 1463 aaKnown RBP17.91■□□□□ 0.46
RGP1-201ENST00000378078 SCARA5Q6ZMJ2 495 aa17.9■□□□□ 0.46
RGP1-201ENST00000378078 HOOK2Q96ED9 719 aa17.9■□□□□ 0.46
RGP1-201ENST00000378078 SLC39A2Q9NP94 309 aa17.9■□□□□ 0.46
RGP1-201ENST00000378078 CAVIN2O95810 425 aa17.9■□□□□ 0.46
RGP1-201ENST00000378078 MUM1Q2TAK8 710 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms