RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 SNX29Q8TEQ0 813 aa9.17□□□□□ -0.94
CKAP2-203ENST00000378037 GDAQ9Y2T3 454 aa9.17□□□□□ -0.94
CKAP2-203ENST00000378037 LEMD3Q9Y2U8 911 aa9.17□□□□□ -0.94
CKAP2-203ENST00000378037 POSTNQ15063 836 aa9.17□□□□□ -0.94
CKAP2-203ENST00000378037 SLFN13Q68D06 897 aa9.17□□□□□ -0.94
CKAP2-203ENST00000378037 ADALQ6DHV7 355 aa9.17□□□□□ -0.94
CKAP2-203ENST00000378037 FBXO28Q9NVF7 368 aa9.17□□□□□ -0.94
CKAP2-203ENST00000378037 ARFGEF2Q9Y6D5 1785 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 TRIM49BA6NDI0 452 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 WNT7AO00755 349 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 MMP1P03956 469 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 DPEP1P16444 411 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 PDE4DQ08499 809 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 PTPN14Q15678 1187 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 CCDC112Q8NEF3 446 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 AKT1S1Q96B36 256 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 PPP1R16BQ96T49 567 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 PLA2G12BQ9BX93 195 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 ATP8A2Q9NTI2 1148 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 CEP290O15078 2479 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 SHC4Q6S5L8 630 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 PROM2Q8N271 834 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 PRMT6Q96LA8 375 aaPredicted RBP9.16□□□□□ -0.94
CKAP2-203ENST00000378037 RIOK1Q9BRS2 568 aaKnown RBP9.16□□□□□ -0.94
CKAP2-203ENST00000378037 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.16□□□□□ -0.94
CKAP2-203ENST00000378037 DDX4Q9NQI0 724 aaKnown RBP9.16□□□□□ -0.94
CKAP2-203ENST00000378037 FBXO3Q9UK99 471 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 HDAC9Q9UKV0 1011 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 MROH7-TTC4A0A0A0MT08 1334 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 TCHHQ07283 1943 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 ADAMTS3O15072 1205 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 AP5Z1O43299 807 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 PEX10O60683 326 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 TDP2O95551 362 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 IFNAR1P17181 557 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 TRIM21P19474 475 aaKnown RBP9.16□□□□□ -0.94
CKAP2-203ENST00000378037 STAT3P40763 770 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 ECE1P42892 770 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 CBX1P83916 185 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 FANCCQ00597 558 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 SYT10Q6XYQ8 523 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 CALML4Q96GE6 196 aa9.16□□□□□ -0.94
CKAP2-203ENST00000378037 TPM2P07951 284 aa9.15□□□□□ -0.94
CKAP2-203ENST00000378037 PDIA4P13667 645 aaKnown RBP9.15□□□□□ -0.94
CKAP2-203ENST00000378037 PLCG2P16885 1265 aa9.15□□□□□ -0.94
CKAP2-203ENST00000378037 GNG11P61952 73 aa9.15□□□□□ -0.94
CKAP2-203ENST00000378037 FAM193AP78312 1265 aa9.15□□□□□ -0.94
CKAP2-203ENST00000378037 ABCB5Q2M3G0 1257 aa9.15□□□□□ -0.94
CKAP2-203ENST00000378037 DCAF17Q5H9S7 520 aaPredicted RBP9.15□□□□□ -0.94
CKAP2-203ENST00000378037 ANKRD13CQ8N6S4 541 aa9.15□□□□□ -0.94
CKAP2-203ENST00000378037 TTLL6Q8N841 843 aa9.15□□□□□ -0.94
CKAP2-203ENST00000378037 ZNF384Q8TF68 577 aa9.15□□□□□ -0.94
CKAP2-203ENST00000378037 EXOC1Q9NV70 894 aa9.15□□□□□ -0.94
CKAP2-203ENST00000378037 TCRBV5S4A2TA0A5A2 114 aa9.15□□□□□ -0.94
CKAP2-203ENST00000378037 FMNL1O95466 1100 aaPredicted RBP9.15□□□□□ -0.94
CKAP2-203ENST00000378037 EEF2P13639 858 aaKnown RBP9.15□□□□□ -0.94
CKAP2-203ENST00000378037 FLT1P17948 1338 aa9.15□□□□□ -0.94
CKAP2-203ENST00000378037 MRPS25P82663 173 aaKnown RBP9.15□□□□□ -0.94
CKAP2-203ENST00000378037 SLC39A14Q15043 492 aa9.15□□□□□ -0.94
CKAP2-203ENST00000378037 TMEM266Q2M3C6 531 aa9.15□□□□□ -0.94
CKAP2-203ENST00000378037 CCDC144BQ3MJ40 725 aa9.15□□□□□ -0.94
CKAP2-203ENST00000378037 CCDC40Q4G0X9 1142 aa9.15□□□□□ -0.94
CKAP2-203ENST00000378037 TEX35Q5T0J7 233 aa9.15□□□□□ -0.94
CKAP2-203ENST00000378037 FBXO33Q7Z6M2 555 aa9.15□□□□□ -0.94
CKAP2-203ENST00000378037 TPH2Q8IWU9 490 aa9.15□□□□□ -0.94
CKAP2-203ENST00000378037 CACTINQ8WUQ7 758 aaKnown RBP9.15□□□□□ -0.94
CKAP2-203ENST00000378037 MASTLQ96GX5 879 aa9.15□□□□□ -0.94
CKAP2-203ENST00000378037 PSTPIP2Q9H939 334 aa9.15□□□□□ -0.94
CKAP2-203ENST00000378037 KIAA1551Q9HCM1 1747 aa9.15□□□□□ -0.94
CKAP2-203ENST00000378037 NRXN2Q9P2S2 1712 aa9.15□□□□□ -0.94
CKAP2-203ENST00000378037 LRWD1Q9UFC0 647 aa9.15□□□□□ -0.94
CKAP2-203ENST00000378037 KDM3BQ7LBC6 1761 aa9.15□□□□□ -0.95
CKAP2-203ENST00000378037 DLEC1Q9Y238 1755 aa9.15□□□□□ -0.95
CKAP2-203ENST00000378037 ELP1O95163 1332 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 NPR1P16066 1061 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 ZNF75DP51815 510 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 PABPC4Q13310 644 aaKnown RBP eCLIP9.14□□□□□ -0.955e-7■■□□□ 12.6
CKAP2-203ENST00000378037 STIM1Q13586 685 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 ARHGAP29Q52LW3 1261 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 DHX37Q8IY37 1157 aaKnown RBP9.14□□□□□ -0.95
CKAP2-203ENST00000378037 STAG1Q8WVM7 1258 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 FAM212AQ96EL1 285 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 GDAP1L1Q96MZ0 367 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 NLRC4Q9NPP4 1024 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 FAM207AQ9NSI2 230 aaPredicted RBP9.14□□□□□ -0.95
CKAP2-203ENST00000378037 RIC1Q4ADV7 1423 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 TESPA1A2RU30 521 aaPredicted RBP9.14□□□□□ -0.95
CKAP2-203ENST00000378037 DDTLA6NHG4 134 aaPredicted RBP9.14□□□□□ -0.95
CKAP2-203ENST00000378037 SMTNL1A8MU46 457 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 UBXN1Q04323 297 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 NONOQ15233 471 aaKnown RBP eCLIP9.14□□□□□ -0.95
CKAP2-203ENST00000378037 CEP135Q66GS9 1140 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 WWC2Q6AWC2 1192 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 CDC42EP5Q6NZY7 148 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 CAGE1Q8TC20 777 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 CUL5Q93034 780 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 RCOR1Q9UKL0 485 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 DOT1LQ8TEK3 1739 aa9.14□□□□□ -0.95
CKAP2-203ENST00000378037 PRRC2BQ5JSZ5 2229 aaKnown RBP9.14□□□□□ -0.95
CKAP2-203ENST00000378037 NEMFO60524 1076 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms