RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 WDR93Q6P2C0 686 aa20.24■□□□□ 0.83
GNE-201ENST00000377902 ANKRD20A12PQ8NF67 263 aa20.24■□□□□ 0.83
GNE-201ENST00000377902 OR8K1Q8NGG5 319 aa20.24■□□□□ 0.83
GNE-201ENST00000377902 LACRTQ9GZZ8 138 aa20.24■□□□□ 0.83
GNE-201ENST00000377902 TSPYL1Q9H0U9 437 aa20.24■□□□□ 0.83
GNE-201ENST00000377902 ANAPC4Q9UJX5 808 aa20.24■□□□□ 0.83
GNE-201ENST00000377902 BMP15O95972 392 aa20.24■□□□□ 0.83
GNE-201ENST00000377902 MYBL2P10244 700 aa20.24■□□□□ 0.83
GNE-201ENST00000377902 USP14P54578 494 aa20.24■□□□□ 0.83
GNE-201ENST00000377902 IQCA1Q86XH1 822 aa20.24■□□□□ 0.83
GNE-201ENST00000377902 ZNF384Q8TF68 577 aa20.24■□□□□ 0.83
GNE-201ENST00000377902 USP17L12C9JPN9 530 aa20.23■□□□□ 0.83
GNE-201ENST00000377902 USP17L21D6R901 530 aa20.23■□□□□ 0.83
GNE-201ENST00000377902 NKRFO15226 690 aaKnown RBP eCLIP20.23■□□□□ 0.83
GNE-201ENST00000377902 SPAG1Q07617 926 aa20.23■□□□□ 0.83
GNE-201ENST00000377902 GBP3Q9H0R5 595 aa20.23■□□□□ 0.83
GNE-201ENST00000377902 GNL3LQ9NVN8 582 aaKnown RBP20.23■□□□□ 0.83
GNE-201ENST00000377902 LUC7L2Q9Y383 392 aaKnown RBP20.23■□□□□ 0.83
GNE-201ENST00000377902 STAT6P42226 847 aa20.23■□□□□ 0.83
GNE-201ENST00000377902 PPP2R5BQ15173 497 aa20.23■□□□□ 0.83
GNE-201ENST00000377902 CTR9Q6PD62 1173 aa20.23■□□□□ 0.83
GNE-201ENST00000377902 GPIHBP1Q8IV16 184 aa20.23■□□□□ 0.83
GNE-201ENST00000377902 GPKOWQ92917 476 aaPredicted RBP eCLIP20.23■□□□□ 0.83
GNE-201ENST00000377902 SAR1BQ9Y6B6 198 aa20.23■□□□□ 0.83
GNE-201ENST00000377902 FAM205AQ6ZU69 1335 aa20.23■□□□□ 0.83
GNE-201ENST00000377902 B4DLN1 442 aa20.22■□□□□ 0.83
GNE-201ENST00000377902 PSMD14O00487 310 aa20.22■□□□□ 0.83
GNE-201ENST00000377902 TRIM14Q14142 442 aa20.22■□□□□ 0.83
GNE-201ENST00000377902 MSL3Q8N5Y2 521 aaKnown RBP20.22■□□□□ 0.83
GNE-201ENST00000377902 RBM28Q9NW13 759 aaKnown RBP20.22■□□□□ 0.83
GNE-201ENST00000377902 COL4A1P02462 1669 aa20.22■□□□□ 0.83
GNE-201ENST00000377902 ARAP2Q8WZ64 1704 aa20.22■□□□□ 0.83
GNE-201ENST00000377902 PDE2AO00408 941 aaPredicted RBP20.22■□□□□ 0.83
GNE-201ENST00000377902 IGHMBP2P38935 993 aaKnown RBP20.22■□□□□ 0.83
GNE-201ENST00000377902 MRPS25P82663 173 aaKnown RBP20.22■□□□□ 0.83
GNE-201ENST00000377902 CYP27A1Q02318 531 aa20.22■□□□□ 0.83
GNE-201ENST00000377902 NAALADL2Q58DX5 795 aa20.22■□□□□ 0.83
GNE-201ENST00000377902 ADSSL1Q8N142 457 aa20.22■□□□□ 0.83
GNE-201ENST00000377902 A0A0G2JS52 829 aa20.21■□□□□ 0.83
GNE-201ENST00000377902 SCG2P13521 617 aa20.21■□□□□ 0.83
GNE-201ENST00000377902 TUBB4BP68371 445 aa20.21■□□□□ 0.83
GNE-201ENST00000377902 C4orf32Q8N8J7 132 aa20.21■□□□□ 0.83
GNE-201ENST00000377902 ZNF507Q8TCN5 953 aa20.21■□□□□ 0.83
GNE-201ENST00000377902 LRRC15Q8TF66 581 aa20.21■□□□□ 0.83
GNE-201ENST00000377902 HPCAL4Q9UM19 191 aa20.21■□□□□ 0.83
GNE-201ENST00000377902 MYH13Q9UKX3 1938 aa20.21■□□□□ 0.83
GNE-201ENST00000377902 LRP5O75197 1615 aa20.21■□□□□ 0.83
GNE-201ENST00000377902 RASSF10A6NK89 507 aa20.21■□□□□ 0.83
GNE-201ENST00000377902 ERVV-1B6SEH8 477 aa20.21■□□□□ 0.83
GNE-201ENST00000377902 H7C1D1 291 aa20.21■□□□□ 0.83
GNE-201ENST00000377902 CYP2D6P10635 497 aa20.21■□□□□ 0.83
GNE-201ENST00000377902 DNAJC7Q99615 494 aa20.21■□□□□ 0.83
GNE-201ENST00000377902 HAUS4Q9H6D7 363 aa20.21■□□□□ 0.83
GNE-201ENST00000377902 ANKRD36CQ5JPF3 1778 aa20.21■□□□□ 0.83
GNE-201ENST00000377902 MACROD2A1Z1Q3 448 aa20.2■□□□□ 0.82
GNE-201ENST00000377902 LGALS16A8MUM7 142 aa20.2■□□□□ 0.82
GNE-201ENST00000377902 KIAA1328Q86T90 577 aa20.2■□□□□ 0.82
GNE-201ENST00000377902 PLCD3Q8N3E9 789 aa20.2■□□□□ 0.82
GNE-201ENST00000377902 RASSF8Q8NHQ8 419 aa20.2■□□□□ 0.82
GNE-201ENST00000377902 CTCFLQ8NI51 663 aaPredicted RBP20.2■□□□□ 0.82
GNE-201ENST00000377902 JAKMIP2Q96AA8 810 aa20.2■□□□□ 0.82
GNE-201ENST00000377902 COL1A1P02452 1464 aaPredicted RBP20.2■□□□□ 0.82
GNE-201ENST00000377902 ZC3H4Q9UPT8 1303 aaKnown RBP20.2■□□□□ 0.82
GNE-201ENST00000377902 PRPF6O94906 941 aaKnown RBP20.2■□□□□ 0.82
GNE-201ENST00000377902 IVLP07476 585 aa20.2■□□□□ 0.82
GNE-201ENST00000377902 SMCR8Q8TEV9 937 aaPredicted RBP20.2■□□□□ 0.82
GNE-201ENST00000377902 TRIM47Q96LD4 638 aa20.2■□□□□ 0.82
GNE-201ENST00000377902 CAPN11Q9UMQ6 739 aa20.2■□□□□ 0.82
GNE-201ENST00000377902 DUOX1Q9NRD9 1551 aa20.19■□□□□ 0.82
GNE-201ENST00000377902 GGCXP38435 758 aa20.19■□□□□ 0.82
GNE-201ENST00000377902 C2orf54Q08AI8 447 aa20.19■□□□□ 0.82
GNE-201ENST00000377902 TMEM60Q9H2L4 133 aa20.19■□□□□ 0.82
GNE-201ENST00000377902 MED4Q9NPJ6 270 aa20.19■□□□□ 0.82
GNE-201ENST00000377902 CICQ96RK0 1608 aaPredicted RBP20.19■□□□□ 0.82
GNE-201ENST00000377902 DISC1Q9NRI5 854 aa20.19■□□□□ 0.82
GNE-201ENST00000377902 RMND1Q9NWS8 449 aa20.19■□□□□ 0.82
GNE-201ENST00000377902 IL6STP40189 918 aaPredicted RBP20.18■□□□□ 0.82
GNE-201ENST00000377902 PAPD7Q5XG87 772 aaKnown RBP20.18■□□□□ 0.82
GNE-201ENST00000377902 TYW1BQ6NUM6 668 aa20.18■□□□□ 0.82
GNE-201ENST00000377902 MTMR7Q9Y216 660 aa20.18■□□□□ 0.82
GNE-201ENST00000377902 PLCH1Q4KWH8 1693 aa20.18■□□□□ 0.82
GNE-201ENST00000377902 KLRC4O43908 158 aa20.18■□□□□ 0.82
GNE-201ENST00000377902 RPS6KA5O75582 802 aa20.18■□□□□ 0.82
GNE-201ENST00000377902 PFKFB3Q16875 520 aaPredicted RBP20.18■□□□□ 0.82
GNE-201ENST00000377902 CCDC152Q4G0S7 254 aa20.18■□□□□ 0.82
GNE-201ENST00000377902 CAGE1Q8TC20 777 aa20.18■□□□□ 0.82
GNE-201ENST00000377902 NHEJ1Q9H9Q4 299 aaPredicted RBP20.18■□□□□ 0.82
GNE-201ENST00000377902 DCCP43146 1447 aa20.18■□□□□ 0.82
GNE-201ENST00000377902 ITGB4P16144 1822 aa20.17■□□□□ 0.82
GNE-201ENST00000377902 PLEKP08567 350 aaPredicted RBP20.17■□□□□ 0.82
GNE-201ENST00000377902 CALM1P0DP23 149 aa20.17■□□□□ 0.82
GNE-201ENST00000377902 CALM2P0DP24 149 aa20.17■□□□□ 0.82
GNE-201ENST00000377902 CALM3P0DP25 149 aa20.17■□□□□ 0.82
GNE-201ENST00000377902 TRIM21P19474 475 aaKnown RBP20.17■□□□□ 0.82
GNE-201ENST00000377902 EIF5P55010 431 aaKnown RBP20.17■□□□□ 0.82
GNE-201ENST00000377902 EZH2Q15910 746 aaKnown RBP20.17■□□□□ 0.82
GNE-201ENST00000377902 TSR1Q2NL82 804 aaKnown RBP20.17■□□□□ 0.82
GNE-201ENST00000377902 KRT26Q7Z3Y9 468 aa20.17■□□□□ 0.82
GNE-201ENST00000377902 AFAP1L1Q8TED9 768 aa20.17■□□□□ 0.82
GNE-201ENST00000377902 JADE2Q9NQC1 790 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms