RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 TLDC2A0PJX2 215 aa9.71□□□□□ -0.85
PCDH9-202ENST00000377865 A1BGP04217 495 aa9.71□□□□□ -0.85
PCDH9-202ENST00000377865 FAM184BQ9ULE4 1060 aa9.71□□□□□ -0.85
PCDH9-202ENST00000377865 SALL3Q9BXA9 1300 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 ANO9A1A5B4 782 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 TRIM37O94972 964 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 LDHBP07195 334 aaKnown RBP9.71□□□□□ -0.86
PCDH9-202ENST00000377865 ALDH3A1P30838 453 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 CALCRLQ16602 461 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 TCP11X2Q5H9J9 407 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 MCTP2Q6DN12 878 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 CCDC174Q6PII3 467 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 STAMQ92783 540 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 TMOD2Q9NZR1 351 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 NDC80O14777 642 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 TNFAIP3P21580 790 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 CTNNA2P26232 953 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 ARID4AP29374 1257 aaPredicted RBP9.71□□□□□ -0.86
PCDH9-202ENST00000377865 PTGDRQ13258 359 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 GLE1Q53GS7 698 aaKnown RBP9.71□□□□□ -0.86
PCDH9-202ENST00000377865 DENND2CQ68D51 928 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 EMBQ6PCB8 327 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 CNOT6LQ96LI5 555 aaKnown RBP9.71□□□□□ -0.86
PCDH9-202ENST00000377865 AK8Q96MA6 479 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 LSM14BQ9BX40 385 aaKnown RBP9.71□□□□□ -0.86
PCDH9-202ENST00000377865 IKBKGQ9Y6K9 419 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 TARSL2A2RTX5 802 aaKnown RBP9.71□□□□□ -0.86
PCDH9-202ENST00000377865 PTPREP23469 700 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 SLC4A8Q2Y0W8 1093 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 MUM1L1Q5H9M0 696 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 DCAF17Q5H9S7 520 aaPredicted RBP9.71□□□□□ -0.86
PCDH9-202ENST00000377865 PEX26Q7Z412 305 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 GDAP1L1Q96MZ0 367 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 TUBGCP2Q9BSJ2 902 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 NT5C3AQ9H0P0 336 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 KCNK9Q9NPC2 374 aa9.71□□□□□ -0.86
PCDH9-202ENST00000377865 FAM207AQ9NSI2 230 aaPredicted RBP9.71□□□□□ -0.86
PCDH9-202ENST00000377865 DIP2CQ9Y2E4 1556 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 TMEM110-MUSTN1A8MSY1 372 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 TMEM232C9JQI7 657 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 ADCY7P51828 1080 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 MRPL12P52815 198 aaKnown RBP9.7□□□□□ -0.86
PCDH9-202ENST00000377865 ST5P78524 1137 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 ZBED6P86452 979 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 SEMA3FQ13275 785 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 GKAP1Q5VSY0 366 aaPredicted RBP9.7□□□□□ -0.86
PCDH9-202ENST00000377865 ICE2Q659A1 982 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 MMS22LQ6ZRQ5 1243 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 MB21D2Q8IYB1 491 aaPredicted RBP9.7□□□□□ -0.86
PCDH9-202ENST00000377865 ELOA2Q8IYF1 753 aaPredicted RBP9.7□□□□□ -0.86
PCDH9-202ENST00000377865 NLRP3Q96P20 1036 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 VIPAS39Q9H9C1 493 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 L2HGDHQ9H9P8 463 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 FRMD4BQ9Y2L6 1034 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 SMIM23A6NLE4 172 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 PRPF3O43395 683 aaKnown RBP9.7□□□□□ -0.86
PCDH9-202ENST00000377865 LTKP29376 864 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 EXOSC10Q01780 885 aaKnown RBP9.7□□□□□ -0.86
PCDH9-202ENST00000377865 TADA2BQ86TJ2 420 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 SNX29Q8TEQ0 813 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 MAP2P11137 1827 aaKnown RBP9.7□□□□□ -0.86
PCDH9-202ENST00000377865 CPS1P31327 1500 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 OR52Z1P0C646 297 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 PPP4R3AQ6IN85 833 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 WHAMMQ8TF30 809 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 PAIP2Q9BPZ3 127 aaKnown RBP9.7□□□□□ -0.86
PCDH9-202ENST00000377865 MTA3Q9BTC8 594 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 RABEP2Q9H5N1 569 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 ABHD10Q9NUJ1 306 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 AK9Q5TCS8 1911 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 ADORA1P30542 326 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 GUCY2FP51841 1108 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 KRT71Q3SY84 523 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 P2RX5Q93086 422 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 IL17RAQ96F46 866 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 PPANQ9NQ55 473 aaKnown RBP9.7□□□□□ -0.86
PCDH9-202ENST00000377865 PREX1Q8TCU6 1659 aa9.7□□□□□ -0.86
PCDH9-202ENST00000377865 TXKP42681 527 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 C2orf54Q08AI8 447 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 NBPF5PQ86XG9 351 aaPredicted RBP9.69□□□□□ -0.86
PCDH9-202ENST00000377865 RAB3IPQ96QF0 476 aaPredicted RBP9.69□□□□□ -0.86
PCDH9-202ENST00000377865 AMFRQ9UKV5 643 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 MROH1Q8NDA8 1641 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 B4DLN1 442 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 NT5C2P49902 561 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 KRT31Q15323 416 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 GRIPAP1Q4V328 841 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 MYOCDQ8IZQ8 938 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 MB21D1Q8N884 522 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 MAIP1Q8WWC4 291 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 NHEJ1Q9H9Q4 299 aaPredicted RBP9.69□□□□□ -0.86
PCDH9-202ENST00000377865 ADGRG1Q9Y653 693 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 H7C1W4 665 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 DAAM2Q86T65 1068 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 RUNDC3BQ96NL0 473 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 BZW2Q9Y6E2 419 aaKnown RBP9.69□□□□□ -0.86
PCDH9-202ENST00000377865 SPDYE3A6NKU9 549 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 EIF3CLB5ME19 914 aaKnown RBP9.69□□□□□ -0.86
PCDH9-202ENST00000377865 ENC1O14682 589 aa9.69□□□□□ -0.86
PCDH9-202ENST00000377865 ARL6IP4Q66PJ3 421 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms