RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 COL9A3Q14050 684 aaPredicted RBP14.41□□□□□ -0.1
VRK3-202ENST00000377011 NECTIN1Q15223 517 aa14.41□□□□□ -0.1
VRK3-202ENST00000377011 RRP12Q5JTH9 1297 aaKnown RBP14.41□□□□□ -0.1
VRK3-202ENST00000377011 FAM83BQ5T0W9 1011 aa14.41□□□□□ -0.1
VRK3-202ENST00000377011 ATG4CQ96DT6 458 aa14.41□□□□□ -0.1
VRK3-202ENST00000377011 TANGO6Q9C0B7 1094 aa14.41□□□□□ -0.1
VRK3-202ENST00000377011 ARHGEF10LQ9HCE6 1279 aa14.41□□□□□ -0.1
VRK3-202ENST00000377011 CYP46A1Q9Y6A2 500 aa14.41□□□□□ -0.1
VRK3-202ENST00000377011 PLIN4Q96Q06 1357 aa14.4□□□□□ -0.1
VRK3-202ENST00000377011 POTEFA5A3E0 1075 aa14.4□□□□□ -0.1
VRK3-202ENST00000377011 NDUFB10O96000 172 aa14.4□□□□□ -0.1
VRK3-202ENST00000377011 ELNP15502 786 aa14.4□□□□□ -0.1
VRK3-202ENST00000377011 PSMA5P28066 241 aa14.4□□□□□ -0.1
VRK3-202ENST00000377011 GCLCP48506 637 aaPredicted RBP14.4□□□□□ -0.1
VRK3-202ENST00000377011 FLT3LGP49771 235 aa14.4□□□□□ -0.1
VRK3-202ENST00000377011 FCGRTP55899 365 aa14.4□□□□□ -0.1
VRK3-202ENST00000377011 UBE2HP62256 183 aa14.4□□□□□ -0.1
VRK3-202ENST00000377011 ERVK-9P63128 1117 aa14.4□□□□□ -0.1
VRK3-202ENST00000377011 ERVK-24P63145 666 aa14.4□□□□□ -0.1
VRK3-202ENST00000377011 PABPC4Q13310 644 aaKnown RBP eCLIP14.4□□□□□ -0.14e-9■■■■■ 30
VRK3-202ENST00000377011 KIF22Q14807 665 aa14.4□□□□□ -0.1
VRK3-202ENST00000377011 CCDC183Q5T5S1 534 aa14.4□□□□□ -0.1
VRK3-202ENST00000377011 NOL8Q76FK4 1167 aaKnown RBP14.4□□□□□ -0.1
VRK3-202ENST00000377011 NYAP2Q9P242 653 aa14.4□□□□□ -0.1
VRK3-202ENST00000377011 GJD2Q9UKL4 321 aa14.4□□□□□ -0.1
VRK3-202ENST00000377011 F5H6K3 240 aa14.39□□□□□ -0.11
VRK3-202ENST00000377011 TNPO2O14787 897 aaKnown RBP14.39□□□□□ -0.11
VRK3-202ENST00000377011 RANBP6O60518 1105 aaKnown RBP14.39□□□□□ -0.11
VRK3-202ENST00000377011 F13A1P00488 732 aa14.39□□□□□ -0.11
VRK3-202ENST00000377011 TSPY3P0CV98 308 aa14.39□□□□□ -0.11
VRK3-202ENST00000377011 TSPY8P0CW00 308 aa14.39□□□□□ -0.11
VRK3-202ENST00000377011 CASTP20810 708 aaKnown RBP14.39□□□□□ -0.11
VRK3-202ENST00000377011 PDE4BQ07343 736 aa14.39□□□□□ -0.11
VRK3-202ENST00000377011 KLRC3Q07444 240 aa14.39□□□□□ -0.11
VRK3-202ENST00000377011 HSP90AA2PQ14568 343 aaPredicted RBP14.39□□□□□ -0.11
VRK3-202ENST00000377011 MTFR1Q15390 333 aa14.39□□□□□ -0.11
VRK3-202ENST00000377011 TICAM2Q86XR7 235 aa14.39□□□□□ -0.11
VRK3-202ENST00000377011 PDRG1Q9NUG6 133 aa14.39□□□□□ -0.11
VRK3-202ENST00000377011 TAOK2Q9UL54 1235 aa14.39□□□□□ -0.11
VRK3-202ENST00000377011 ORC4O43929 436 aa14.38□□□□□ -0.11
VRK3-202ENST00000377011 SYT1P21579 422 aa14.38□□□□□ -0.11
VRK3-202ENST00000377011 TRIM32Q13049 653 aa14.38□□□□□ -0.11
VRK3-202ENST00000377011 ANKRD1Q15327 319 aa14.38□□□□□ -0.11
VRK3-202ENST00000377011 RNF20Q5VTR2 975 aa14.38□□□□□ -0.11
VRK3-202ENST00000377011 FOXD4L5Q5VV16 416 aaPredicted RBP14.38□□□□□ -0.11
VRK3-202ENST00000377011 GPRC5AQ8NFJ5 357 aa14.38□□□□□ -0.11
VRK3-202ENST00000377011 FOXD4L4Q8WXT5 416 aaPredicted RBP14.38□□□□□ -0.11
VRK3-202ENST00000377011 MAP4K1Q92918 833 aa14.38□□□□□ -0.11
VRK3-202ENST00000377011 ARMC5Q96C12 935 aa14.38□□□□□ -0.11
VRK3-202ENST00000377011 ZNF333Q96JL9 665 aa14.38□□□□□ -0.11
VRK3-202ENST00000377011 ZKSCAN3Q9BRR0 538 aa14.38□□□□□ -0.11
VRK3-202ENST00000377011 ZMYM6O95789 1325 aa14.38□□□□□ -0.11
VRK3-202ENST00000377011 TSPY2A6NKD2 308 aa14.38□□□□□ -0.11
VRK3-202ENST00000377011 FLOT1O75955 427 aa14.38□□□□□ -0.11
VRK3-202ENST00000377011 DSG3P32926 999 aa14.38□□□□□ -0.11
VRK3-202ENST00000377011 LBX2Q6XYB7 198 aa14.38□□□□□ -0.11
VRK3-202ENST00000377011 MKL1Q969V6 931 aa14.38□□□□□ -0.11
VRK3-202ENST00000377011 JAKMIP1Q96N16 626 aaKnown RBP14.38□□□□□ -0.11
VRK3-202ENST00000377011 TOMM22Q9NS69 142 aa14.38□□□□□ -0.11
VRK3-202ENST00000377011 ZKSCAN5Q9Y2L8 839 aa14.38□□□□□ -0.11
VRK3-202ENST00000377011 NOVP48745 357 aa14.37□□□□□ -0.11
VRK3-202ENST00000377011 COG2Q14746 738 aa14.37□□□□□ -0.11
VRK3-202ENST00000377011 TMEM132BQ14DG7 1078 aa14.37□□□□□ -0.11
VRK3-202ENST00000377011 TSGA10IPQ3SY00 556 aa14.37□□□□□ -0.11
VRK3-202ENST00000377011 AKNAD1Q5T1N1 836 aa14.37□□□□□ -0.11
VRK3-202ENST00000377011 RCSD1Q6JBY9 416 aa14.37□□□□□ -0.11
VRK3-202ENST00000377011 STAG1Q8WVM7 1258 aa14.37□□□□□ -0.11
VRK3-202ENST00000377011 DSCC1Q9BVC3 393 aa14.37□□□□□ -0.11
VRK3-202ENST00000377011 MTMR7Q9Y216 660 aa14.37□□□□□ -0.11
VRK3-202ENST00000377011 SMCHD1A6NHR9 2005 aa14.37□□□□□ -0.11
VRK3-202ENST00000377011 WDR46O15213 610 aaKnown RBP14.36□□□□□ -0.11
VRK3-202ENST00000377011 TTLL1O95922 423 aa14.36□□□□□ -0.11
VRK3-202ENST00000377011 TAL1P17542 331 aaPredicted RBP14.36□□□□□ -0.11
VRK3-202ENST00000377011 CCL14Q16627 93 aa14.36□□□□□ -0.11
VRK3-202ENST00000377011 SLC9C1Q4G0N8 1177 aa14.36□□□□□ -0.11
VRK3-202ENST00000377011 CREB3L3Q68CJ9 461 aa14.36□□□□□ -0.11
VRK3-202ENST00000377011 GPR142Q7Z601 462 aa14.36□□□□□ -0.11
VRK3-202ENST00000377011 REPS2Q8NFH8 660 aa14.36□□□□□ -0.11
VRK3-202ENST00000377011 LPAR1Q92633 364 aa14.36□□□□□ -0.11
VRK3-202ENST00000377011 CHAMP1Q96JM3 812 aa14.36□□□□□ -0.11
VRK3-202ENST00000377011 MOV10L1Q9BXT6 1211 aaKnown RBP14.36□□□□□ -0.11
VRK3-202ENST00000377011 STX8Q9UNK0 236 aa14.36□□□□□ -0.11
VRK3-202ENST00000377011 RABGAP1Q9Y3P9 1069 aa14.36□□□□□ -0.11
VRK3-202ENST00000377011 RBM8AQ9Y5S9 174 aaKnown RBP14.36□□□□□ -0.11
VRK3-202ENST00000377011 DNAH12Q6ZR08 3092 aa14.36□□□□□ -0.11
VRK3-202ENST00000377011 B4E1Z4 1266 aa14.35□□□□□ -0.11
VRK3-202ENST00000377011 SLC3A2P08195 630 aaKnown RBP14.35□□□□□ -0.11
VRK3-202ENST00000377011 PDCP20941 246 aa14.35□□□□□ -0.11
VRK3-202ENST00000377011 SNAP25P60880 206 aa14.35□□□□□ -0.11
VRK3-202ENST00000377011 STOX1Q6ZVD7 989 aa14.35□□□□□ -0.11
VRK3-202ENST00000377011 RAET1EQ8TD07 263 aa14.35□□□□□ -0.11
VRK3-202ENST00000377011 ADAMTS5Q9UNA0 930 aa14.35□□□□□ -0.11
VRK3-202ENST00000377011 ZNF213O14771 459 aa14.35□□□□□ -0.11
VRK3-202ENST00000377011 ADCY3O60266 1144 aa14.35□□□□□ -0.11
VRK3-202ENST00000377011 CYP21A2P08686 494 aa14.35□□□□□ -0.11
VRK3-202ENST00000377011 EN2P19622 333 aaPredicted RBP14.35□□□□□ -0.11
VRK3-202ENST00000377011 CYP2B6P20813 491 aa14.35□□□□□ -0.11
VRK3-202ENST00000377011 GRK4P32298 578 aa14.35□□□□□ -0.11
VRK3-202ENST00000377011 SLFN13Q68D06 897 aa14.35□□□□□ -0.11
VRK3-202ENST00000377011 MFSD6Q6ZSS7 791 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms