RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 PRR16Q569H4 304 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 SPECC1LQ69YQ0 1117 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 CCDC84Q86UT8 332 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-203ENST00000376619 ATP8A2Q9NTI2 1148 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 CDHR2Q9BYE9 1310 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 CHRNA5P30532 468 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 LLGL1Q15334 1064 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 CALCRLQ16602 461 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 NBPF11Q86T75 865 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 UPF1Q92900 1129 aaKnown RBP eCLIP12.51□□□□□ -0.41
HDAC6-203ENST00000376619 CEP95Q96GE4 821 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 SPAG5Q96R06 1193 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 TMEM47Q9BQJ4 181 aa12.51□□□□□ -0.41
HDAC6-203ENST00000376619 AHDC1Q5TGY3 1603 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-203ENST00000376619 SOWAHDA6NJG2 315 aa12.5□□□□□ -0.41
HDAC6-203ENST00000376619 H0YIN7 160 aa12.5□□□□□ -0.41
HDAC6-203ENST00000376619 PLCG2P16885 1265 aa12.5□□□□□ -0.41
HDAC6-203ENST00000376619 HOXA13P31271 388 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-203ENST00000376619 RAPGEF1Q13905 1077 aa12.5□□□□□ -0.41
HDAC6-203ENST00000376619 GRIK5Q16478 980 aa12.5□□□□□ -0.41
HDAC6-203ENST00000376619 CCDC122Q5T0U0 273 aa12.5□□□□□ -0.41
HDAC6-203ENST00000376619 C2CD5Q86YS7 1000 aa12.5□□□□□ -0.41
HDAC6-203ENST00000376619 CCDC42Q96M95 316 aa12.5□□□□□ -0.41
HDAC6-203ENST00000376619 RNF26Q9BY78 433 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-203ENST00000376619 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.5□□□□□ -0.41
HDAC6-203ENST00000376619 USP17L15C9J2P7 530 aa12.5□□□□□ -0.41
HDAC6-203ENST00000376619 USP17L13C9JLJ4 530 aa12.5□□□□□ -0.41
HDAC6-203ENST00000376619 USP17L11C9JVI0 530 aa12.5□□□□□ -0.41
HDAC6-203ENST00000376619 USP17L18D6R9N7 530 aa12.5□□□□□ -0.41
HDAC6-203ENST00000376619 USP17L22D6RA61 530 aa12.5□□□□□ -0.41
HDAC6-203ENST00000376619 USP17L17D6RBQ6 530 aa12.5□□□□□ -0.41
HDAC6-203ENST00000376619 USP17L19D6RCP7 530 aa12.5□□□□□ -0.41
HDAC6-203ENST00000376619 USP17L20D6RJB6 530 aa12.5□□□□□ -0.41
HDAC6-203ENST00000376619 USP17L24Q0WX57 530 aa12.5□□□□□ -0.41
HDAC6-203ENST00000376619 MTF1Q14872 753 aa12.5□□□□□ -0.41
HDAC6-203ENST00000376619 USP17L6PQ6QN14 398 aa12.5□□□□□ -0.41
HDAC6-203ENST00000376619 METTL16Q86W50 562 aaKnown RBP12.5□□□□□ -0.41
HDAC6-203ENST00000376619 TTLL12Q14166 644 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-203ENST00000376619 EARS2Q5JPH6 523 aaKnown RBP12.5□□□□□ -0.41
HDAC6-203ENST00000376619 STAG1Q8WVM7 1258 aa12.5□□□□□ -0.41
HDAC6-203ENST00000376619 TSG101Q99816 390 aa12.5□□□□□ -0.41
HDAC6-203ENST00000376619 POTEMA6NI47 508 aa12.49□□□□□ -0.41
HDAC6-203ENST00000376619 C21orf2O43822 256 aa12.49□□□□□ -0.41
HDAC6-203ENST00000376619 SV2BQ7L1I2 683 aa12.49□□□□□ -0.41
HDAC6-203ENST00000376619 DHX40Q8IX18 779 aaKnown RBP12.49□□□□□ -0.41
HDAC6-203ENST00000376619 TEKT1Q969V4 418 aa12.49□□□□□ -0.41
HDAC6-203ENST00000376619 SH2D3AQ9BRG2 576 aa12.49□□□□□ -0.41
HDAC6-203ENST00000376619 ZMYND10O75800 440 aa12.49□□□□□ -0.41
HDAC6-203ENST00000376619 BMP15O95972 392 aa12.49□□□□□ -0.41
HDAC6-203ENST00000376619 GRAPQ13588 217 aa12.49□□□□□ -0.41
HDAC6-203ENST00000376619 TTBK2Q6IQ55 1244 aa12.49□□□□□ -0.41
HDAC6-203ENST00000376619 ACRBPQ8NEB7 543 aa12.49□□□□□ -0.41
HDAC6-203ENST00000376619 GRAPLQ8TC17 118 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-203ENST00000376619 TDRD3Q9H7E2 651 aaKnown RBP12.49□□□□□ -0.41
HDAC6-203ENST00000376619 COL16A1Q07092 1604 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-203ENST00000376619 TAL1P17542 331 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-203ENST00000376619 SF3A3Q12874 501 aaKnown RBP eCLIP12.49□□□□□ -0.412e-7■■■□□ 18
HDAC6-203ENST00000376619 CLEC4GQ6UXB4 293 aa12.49□□□□□ -0.41
HDAC6-203ENST00000376619 MRFAP1L1Q96HT8 127 aa12.49□□□□□ -0.41
HDAC6-203ENST00000376619 PCDHA1Q9Y5I3 950 aa12.49□□□□□ -0.41
HDAC6-203ENST00000376619 MYCNP04198 464 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-203ENST00000376619 ADCY7P51828 1080 aa12.48□□□□□ -0.41
HDAC6-203ENST00000376619 CYP27A1Q02318 531 aa12.48□□□□□ -0.41
HDAC6-203ENST00000376619 FMR1Q06787 632 aaKnown RBP eCLIP12.48□□□□□ -0.412e-6■■■■□ 22.5
HDAC6-203ENST00000376619 IQCB1Q15051 598 aa12.48□□□□□ -0.41
HDAC6-203ENST00000376619 FOXP1Q9H334 677 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-203ENST00000376619 RMND1Q9NWS8 449 aa12.48□□□□□ -0.41
HDAC6-203ENST00000376619 SFI1A8K8P3 1242 aa12.48□□□□□ -0.41
HDAC6-203ENST00000376619 TYW1BQ6NUM6 668 aa12.48□□□□□ -0.41
HDAC6-203ENST00000376619 XIRP1Q702N8 1843 aaKnown RBP12.48□□□□□ -0.41
HDAC6-203ENST00000376619 PPEF1O14829 653 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-203ENST00000376619 MRPL12P52815 198 aaKnown RBP12.48□□□□□ -0.41
HDAC6-203ENST00000376619 RBL2Q08999 1139 aa12.48□□□□□ -0.41
HDAC6-203ENST00000376619 NSMFQ6X4W1 530 aa12.48□□□□□ -0.41
HDAC6-203ENST00000376619 TMTC3Q6ZXV5 915 aa12.48□□□□□ -0.41
HDAC6-203ENST00000376619 PAGE5Q96GU1 130 aa12.48□□□□□ -0.41
HDAC6-203ENST00000376619 PSTPIP2Q9H939 334 aa12.48□□□□□ -0.41
HDAC6-203ENST00000376619 B4DLN1 442 aa12.48□□□□□ -0.41
HDAC6-203ENST00000376619 PRR5LQ6MZQ0 368 aa12.48□□□□□ -0.41
HDAC6-203ENST00000376619 SLC30A10Q6XR72 485 aa12.48□□□□□ -0.41
HDAC6-203ENST00000376619 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-203ENST00000376619 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.48□□□□□ -0.41
HDAC6-203ENST00000376619 SERPINB13Q9UIV8 391 aa12.48□□□□□ -0.41
HDAC6-203ENST00000376619 BCS1LQ9Y276 419 aa12.48□□□□□ -0.41
HDAC6-203ENST00000376619 KCNJ18B7U540 433 aa12.47□□□□□ -0.41
HDAC6-203ENST00000376619 KIF2AO00139 706 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-203ENST00000376619 TBCAO75347 108 aaKnown RBP12.47□□□□□ -0.41
HDAC6-203ENST00000376619 RPN1P04843 607 aaKnown RBP12.47□□□□□ -0.41
HDAC6-203ENST00000376619 MYCLP12524 364 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-203ENST00000376619 PTPREP23469 700 aa12.47□□□□□ -0.41
HDAC6-203ENST00000376619 MORC3Q14149 939 aa12.47□□□□□ -0.41
HDAC6-203ENST00000376619 KCNJ12Q14500 433 aa12.47□□□□□ -0.41
HDAC6-203ENST00000376619 CERKLQ49MI3 558 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-203ENST00000376619 TPH2Q8IWU9 490 aa12.47□□□□□ -0.41
HDAC6-203ENST00000376619 CGNQ9P2M7 1197 aaKnown RBP12.47□□□□□ -0.41
HDAC6-203ENST00000376619 SYCP1Q15431 976 aa12.47□□□□□ -0.41
HDAC6-203ENST00000376619 FERMT2Q96AC1 680 aa12.47□□□□□ -0.41
HDAC6-203ENST00000376619 PCDHA12Q9UN75 941 aa12.47□□□□□ -0.41
HDAC6-203ENST00000376619 TFR2Q9UP52 801 aa12.47□□□□□ -0.41
HDAC6-203ENST00000376619 PCDHB13Q9Y5F0 798 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms