RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 FAN1Q9Y2M0 1017 aa17.15■□□□□ 0.34
MSH5-203ENST00000375750 DOCK2Q92608 1830 aa17.15■□□□□ 0.34
MSH5-203ENST00000375750 MYH8P13535 1937 aa17.15■□□□□ 0.34
MSH5-203ENST00000375750 SART3Q15020 963 aaKnown RBP17.15■□□□□ 0.34
MSH5-203ENST00000375750 RRAGBQ5VZM2 374 aa17.15■□□□□ 0.34
MSH5-203ENST00000375750 SH3RF1Q7Z6J0 888 aa17.15■□□□□ 0.34
MSH5-203ENST00000375750 MTRQ99707 1265 aa17.15■□□□□ 0.34
MSH5-203ENST00000375750 AATFQ9NY61 560 aaKnown RBP eCLIP17.15■□□□□ 0.34
MSH5-203ENST00000375750 HDAC6Q9UBN7 1215 aa17.15■□□□□ 0.34
MSH5-203ENST00000375750 CTAGE9A4FU28 777 aa17.14■□□□□ 0.33
MSH5-203ENST00000375750 ENC1O14682 589 aa17.14■□□□□ 0.33
MSH5-203ENST00000375750 N4BP3O15049 544 aa17.14■□□□□ 0.33
MSH5-203ENST00000375750 ARHGAP25P42331 645 aa17.14■□□□□ 0.33
MSH5-203ENST00000375750 PPARAQ07869 468 aa17.14■□□□□ 0.33
MSH5-203ENST00000375750 KANK3Q6NY19 840 aa17.14■□□□□ 0.33
MSH5-203ENST00000375750 POTEAQ6S8J7 498 aa17.14■□□□□ 0.33
MSH5-203ENST00000375750 EEF2KMTQ96G04 330 aa17.14■□□□□ 0.33
MSH5-203ENST00000375750 HINFPQ9BQA5 517 aa17.14■□□□□ 0.33
MSH5-203ENST00000375750 TRIM34Q9BYJ4 488 aa17.14■□□□□ 0.33
MSH5-203ENST00000375750 XDHP47989 1333 aa17.14■□□□□ 0.33
MSH5-203ENST00000375750 IRS2Q9Y4H2 1338 aa17.14■□□□□ 0.33
MSH5-203ENST00000375750 GPSM2P81274 684 aa17.14■□□□□ 0.33
MSH5-203ENST00000375750 BRD3Q15059 726 aa17.14■□□□□ 0.33
MSH5-203ENST00000375750 NUP88Q99567 741 aaPredicted RBP17.14■□□□□ 0.33
MSH5-203ENST00000375750 CEP131Q9UPN4 1083 aa17.14■□□□□ 0.33
MSH5-203ENST00000375750 DYNLL1P63167 89 aaKnown RBP17.13■□□□□ 0.33
MSH5-203ENST00000375750 PTGDRQ13258 359 aa17.13■□□□□ 0.33
MSH5-203ENST00000375750 RBM17Q96I25 401 aaKnown RBP17.13■□□□□ 0.33
MSH5-203ENST00000375750 PRDX5P30044 214 aa17.13■□□□□ 0.33
MSH5-203ENST00000375750 AKAP17AQ02040 695 aaKnown RBP17.13■□□□□ 0.33
MSH5-203ENST00000375750 C10orf67Q8IYJ2 551 aa17.13■□□□□ 0.33
MSH5-203ENST00000375750 GDAP1L1Q96MZ0 367 aa17.13■□□□□ 0.33
MSH5-203ENST00000375750 PLEKHA4Q9H4M7 779 aa17.13■□□□□ 0.33
MSH5-203ENST00000375750 L1RE1Q9UN81 338 aa17.13■□□□□ 0.33
MSH5-203ENST00000375750 GDAQ9Y2T3 454 aa17.13■□□□□ 0.33
MSH5-203ENST00000375750 MAGEB6P1A0A0J9YX57 407 aa17.12■□□□□ 0.33
MSH5-203ENST00000375750 NMT2O60551 498 aa17.12■□□□□ 0.33
MSH5-203ENST00000375750 KRT2P35908 639 aa17.12■□□□□ 0.33
MSH5-203ENST00000375750 GPS2Q13227 327 aa17.12■□□□□ 0.33
MSH5-203ENST00000375750 SEC23AQ15436 765 aa17.12■□□□□ 0.33
MSH5-203ENST00000375750 IL17AQ16552 155 aa17.12■□□□□ 0.33
MSH5-203ENST00000375750 ENAHQ8N8S7 591 aaPredicted RBP17.12■□□□□ 0.33
MSH5-203ENST00000375750 GUCA1BQ9UMX6 200 aa17.12■□□□□ 0.33
MSH5-203ENST00000375750 PNPLA7Q6ZV29 1317 aa17.12■□□□□ 0.33
MSH5-203ENST00000375750 SEMA3EO15041 775 aa17.12■□□□□ 0.33
MSH5-203ENST00000375750 SRGAP2O75044 1071 aa17.12■□□□□ 0.33
MSH5-203ENST00000375750 MECOMQ03112 1051 aa17.12■□□□□ 0.33
MSH5-203ENST00000375750 FILIP1LQ4L180 1135 aa17.12■□□□□ 0.33
MSH5-203ENST00000375750 MSL1Q68DK7 614 aa17.12■□□□□ 0.33
MSH5-203ENST00000375750 CEP112Q8N8E3 955 aa17.12■□□□□ 0.33
MSH5-203ENST00000375750 PHF20Q9BVI0 1012 aa17.12■□□□□ 0.33
MSH5-203ENST00000375750 NACAP1Q9BZK3 213 aa17.12■□□□□ 0.33
MSH5-203ENST00000375750 ABHD10Q9NUJ1 306 aa17.12■□□□□ 0.33
MSH5-203ENST00000375750 LEMD3Q9Y2U8 911 aa17.12■□□□□ 0.33
MSH5-203ENST00000375750 TRIM49BA6NDI0 452 aa17.11■□□□□ 0.33
MSH5-203ENST00000375750 LRRIQ3A6PVS8 624 aaPredicted RBP17.11■□□□□ 0.33
MSH5-203ENST00000375750 ANKRD65E5RJM6 399 aa17.11■□□□□ 0.33
MSH5-203ENST00000375750 SLC4A8Q2Y0W8 1093 aa17.11■□□□□ 0.33
MSH5-203ENST00000375750 CCDC102AQ96A19 550 aa17.11■□□□□ 0.33
MSH5-203ENST00000375750 NSUN4Q96CB9 384 aaKnown RBP17.11■□□□□ 0.33
MSH5-203ENST00000375750 RIOK1Q9BRS2 568 aaKnown RBP17.11■□□□□ 0.33
MSH5-203ENST00000375750 REXO2Q9Y3B8 237 aaKnown RBP17.11■□□□□ 0.33
MSH5-203ENST00000375750 CHD4Q14839 1912 aa17.11■□□□□ 0.33
MSH5-203ENST00000375750 ZMYND10O75800 440 aa17.11■□□□□ 0.33
MSH5-203ENST00000375750 GNAT2P19087 354 aa17.11■□□□□ 0.33
MSH5-203ENST00000375750 MCM7P33993 719 aa17.11■□□□□ 0.33
MSH5-203ENST00000375750 FUT2Q10981 343 aa17.11■□□□□ 0.33
MSH5-203ENST00000375750 HDXQ7Z353 690 aa17.11■□□□□ 0.33
MSH5-203ENST00000375750 NLGN1Q8N2Q7 840 aa17.11■□□□□ 0.33
MSH5-203ENST00000375750 MSANTD4Q8NCY6 345 aa17.11■□□□□ 0.33
MSH5-203ENST00000375750 NAPGQ99747 312 aaPredicted RBP17.11■□□□□ 0.33
MSH5-203ENST00000375750 RAB21Q9UL25 225 aa17.11■□□□□ 0.33
MSH5-203ENST00000375750 CCDC196A0A1B0GTZ2 297 aa17.11■□□□□ 0.33
MSH5-203ENST00000375750 PES1O00541 588 aaKnown RBP17.11■□□□□ 0.33
MSH5-203ENST00000375750 KRT9P35527 623 aa17.11■□□□□ 0.33
MSH5-203ENST00000375750 NPY5RQ15761 445 aa17.11■□□□□ 0.33
MSH5-203ENST00000375750 SKIDA1Q1XH10 827 aa17.11■□□□□ 0.33
MSH5-203ENST00000375750 PLIN2Q99541 437 aa17.11■□□□□ 0.33
MSH5-203ENST00000375750 COPB1P53618 953 aaKnown RBP17.1■□□□□ 0.33
MSH5-203ENST00000375750 CASP8Q14790 479 aa17.1■□□□□ 0.33
MSH5-203ENST00000375750 TTC38Q5R3I4 469 aa17.1■□□□□ 0.33
MSH5-203ENST00000375750 PIK3AP1Q6ZUJ8 805 aa17.1■□□□□ 0.33
MSH5-203ENST00000375750 EXOC4Q96A65 974 aa17.1■□□□□ 0.33
MSH5-203ENST00000375750 NAA15Q9BXJ9 866 aaKnown RBP17.1■□□□□ 0.33
MSH5-203ENST00000375750 CTAGE15A4D2H0 777 aa17.1■□□□□ 0.33
MSH5-203ENST00000375750 UFL1O94874 794 aa17.1■□□□□ 0.33
MSH5-203ENST00000375750 CTAGE8P0CG41 777 aa17.1■□□□□ 0.33
MSH5-203ENST00000375750 MUM1L1Q5H9M0 696 aa17.1■□□□□ 0.33
MSH5-203ENST00000375750 CTAGE6Q86UF2 777 aa17.1■□□□□ 0.33
MSH5-203ENST00000375750 CNGA4Q8IV77 575 aa17.1■□□□□ 0.33
MSH5-203ENST00000375750 CTAGE4Q8IX94 777 aa17.1■□□□□ 0.33
MSH5-203ENST00000375750 NELFBQ8WX92 580 aa17.1■□□□□ 0.33
MSH5-203ENST00000375750 GSDMAQ96QA5 445 aa17.1■□□□□ 0.33
MSH5-203ENST00000375750 GPIHBP1Q8IV16 184 aa17.09■□□□□ 0.33
MSH5-203ENST00000375750 CAPZA3Q96KX2 299 aa17.09■□□□□ 0.33
MSH5-203ENST00000375750 RNF26Q9BY78 433 aaPredicted RBP17.09■□□□□ 0.33
MSH5-203ENST00000375750 NID2Q14112 1375 aa17.09■□□□□ 0.33
MSH5-203ENST00000375750 KLRG2A4D1S0 409 aaPredicted RBP17.09■□□□□ 0.33
MSH5-203ENST00000375750 KCNJ18B7U540 433 aa17.09■□□□□ 0.33
MSH5-203ENST00000375750 BBOX1O75936 387 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms