RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 NXNQ6DKJ4 435 aa7.24□□□□□ -1.25
UBR4-204ENST00000375254 TBC1D1Q86TI0 1168 aaPredicted RBP7.24□□□□□ -1.25
UBR4-204ENST00000375254 CALM1P0DP23 149 aa7.24□□□□□ -1.25
UBR4-204ENST00000375254 CALM2P0DP24 149 aa7.24□□□□□ -1.25
UBR4-204ENST00000375254 CALM3P0DP25 149 aa7.24□□□□□ -1.25
UBR4-204ENST00000375254 TBC1D10BQ4KMP7 808 aaPredicted RBP7.24□□□□□ -1.25
UBR4-204ENST00000375254 SYCP3Q8IZU3 236 aa7.24□□□□□ -1.25
UBR4-204ENST00000375254 RNF169Q8NCN4 708 aa7.24□□□□□ -1.25
UBR4-204ENST00000375254 AIDAQ96BJ3 306 aa7.24□□□□□ -1.25
UBR4-204ENST00000375254 TMCO1Q9UM00 188 aa7.24□□□□□ -1.25
UBR4-204ENST00000375254 LCA5LO95447 670 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 ESRRAP11474 423 aaPredicted RBP7.23□□□□□ -1.25
UBR4-204ENST00000375254 PEX26Q7Z412 305 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 CCDC105Q8IYK2 499 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 TMEM132AQ24JP5 1023 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 DZIP3Q86Y13 1208 aaKnown RBP7.23□□□□□ -1.25
UBR4-204ENST00000375254 NOC4LQ9BVI4 516 aaKnown RBP7.23□□□□□ -1.25
UBR4-204ENST00000375254 ABLIM1O14639 778 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 LSM1O15116 133 aaKnown RBP7.23□□□□□ -1.25
UBR4-204ENST00000375254 RRS1Q15050 365 aaKnown RBP7.23□□□□□ -1.25
UBR4-204ENST00000375254 CCT8L2Q96SF2 557 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 SNAPC5O75971 98 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 BCRP11274 1271 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 TMPOP42166 694 aaKnown RBP7.23□□□□□ -1.25
UBR4-204ENST00000375254 EFCAB2Q5VUJ9 269 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 NGDNQ8NEJ9 315 aaKnown RBP7.23□□□□□ -1.25
UBR4-204ENST00000375254 CORO1CQ9ULV4 474 aaPredicted RBP7.23□□□□□ -1.25
UBR4-204ENST00000375254 RINLQ6ZS11 566 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 NDEL1Q9GZM8 345 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 BNC1Q01954 994 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 SEMA3FQ13275 785 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 FAM212AQ96EL1 285 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 ALG1Q9BT22 464 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 TRIM66O15016 1216 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 GSTA1P08263 222 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 CAV1Q03135 178 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 PPWD1Q96BP3 646 aaKnown RBP7.23□□□□□ -1.25
UBR4-204ENST00000375254 ZBTB40Q9NUA8 1239 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 CCDC87Q9NVE4 849 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 TMEM63CQ9P1W3 806 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 WDR91A4D1P6 747 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 METAP2P50579 478 aaKnown RBP eCLIP7.23□□□□□ -1.251e-6■■□□□ 12.4
UBR4-204ENST00000375254 BYSLQ13895 437 aaKnown RBP7.23□□□□□ -1.25
UBR4-204ENST00000375254 ANO1Q5XXA6 986 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 RTL1A6NKG5 1358 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 MED21Q13503 144 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 SPARCL1Q14515 664 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 CENPUQ71F23 418 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 TEKT4Q8WW24 435 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 TPD52L2O43399 206 aaKnown RBP7.23□□□□□ -1.25
UBR4-204ENST00000375254 GUCY1A3Q02108 690 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 FSCBQ5H9T9 825 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 RARS2Q5T160 578 aaKnown RBP7.23□□□□□ -1.25
UBR4-204ENST00000375254 TRAF7Q6Q0C0 670 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 EPS8L2Q9H6S3 715 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 FAM25AB3EWG3 89 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 FAM25CB3EWG5 89 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 FAM25GB3EWG6 89 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 PABPN1Q86U42 306 aaKnown RBP eCLIP7.23□□□□□ -1.254e-8■■■□□ 16.1
UBR4-204ENST00000375254 SIX6OS1Q8N1H7 587 aa7.23□□□□□ -1.25
UBR4-204ENST00000375254 GOLGA8CPA6NN73 597 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 SCG2P13521 617 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 TRIM16LQ309B1 348 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 CRACR2BQ8N4Y2 399 aaPredicted RBP7.22□□□□□ -1.25
UBR4-204ENST00000375254 PDE5AO76074 875 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 DYDC2Q96IM9 177 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 PDE1AP54750 535 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 MCMDC2Q4G0Z9 681 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 OGFOD1Q8N543 542 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 KRT12Q99456 494 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 TRPC7Q9HCX4 862 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 ARHGDIAP52565 204 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 RAD23BP54727 409 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 ASIC2Q16515 512 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 EP400NLQ6ZTU2 488 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 WDR60Q8WVS4 1066 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 CCPG1Q9ULG6 757 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.22□□□□□ -1.25
UBR4-204ENST00000375254 TBC1D8O95759 1140 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 ATP2B2Q01814 1243 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 MAP3K12Q12852 859 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 CALML6Q8TD86 181 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 CIDEBQ9UHD4 219 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 TRPC5Q9UL62 973 aaPredicted RBP7.22□□□□□ -1.25
UBR4-204ENST00000375254 TRPA1O75762 1119 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 ARHGAP44Q17R89 818 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 C1orf115Q9H7X2 142 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 SH3BP5O60239 455 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 CBFA2T3O75081 653 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 CLASP2O75122 1294 aaKnown RBP7.22□□□□□ -1.25
UBR4-204ENST00000375254 ACTN3Q08043 901 aaPredicted RBP7.22□□□□□ -1.25
UBR4-204ENST00000375254 DTHD1Q6ZMT9 781 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 SERPINB8P50452 374 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 GUCY2DQ02846 1103 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 RASSF3Q86WH2 238 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 DYTNA2CJ06 578 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 ZCWPW2Q504Y3 356 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 SFMBT2Q5VUG0 894 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 GPC4O75487 556 aa7.22□□□□□ -1.25
UBR4-204ENST00000375254 MDM2Q00987 491 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms