RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 CEP120Q8N960 986 aa16.22■□□□□ 0.19
NOTCH4-201ENST00000375023 KRT12Q99456 494 aa16.22■□□□□ 0.19
NOTCH4-201ENST00000375023 ALDH1B1P30837 517 aa16.21■□□□□ 0.19
NOTCH4-201ENST00000375023 NUF2Q9BZD4 464 aa16.21■□□□□ 0.19
NOTCH4-201ENST00000375023 I3L4J1 428 aa16.21■□□□□ 0.19
NOTCH4-201ENST00000375023 PSTPIP2Q9H939 334 aa16.21■□□□□ 0.19
NOTCH4-201ENST00000375023 PANK4Q9NVE7 773 aa16.21■□□□□ 0.19
NOTCH4-201ENST00000375023 LRRIQ4A6NIV6 560 aa16.21■□□□□ 0.19
NOTCH4-201ENST00000375023 RSRC1Q96IZ7 334 aaKnown RBP16.21■□□□□ 0.19
NOTCH4-201ENST00000375023 CASP2P42575 452 aa16.21■□□□□ 0.18
NOTCH4-201ENST00000375023 ATP1A2P50993 1020 aa16.21■□□□□ 0.18
NOTCH4-201ENST00000375023 TTBK2Q6IQ55 1244 aa16.21■□□□□ 0.18
NOTCH4-201ENST00000375023 ZNF654Q8IZM8 581 aa16.21■□□□□ 0.18
NOTCH4-201ENST00000375023 MIPOL1Q8TD10 442 aa16.21■□□□□ 0.18
NOTCH4-201ENST00000375023 XPO4Q9C0E2 1151 aaKnown RBP16.21■□□□□ 0.18
NOTCH4-201ENST00000375023 MAST3O60307 1309 aa16.21■□□□□ 0.18
NOTCH4-201ENST00000375023 IL1RL1Q01638 556 aa16.2■□□□□ 0.18
NOTCH4-201ENST00000375023 ERFEQ4G0M1 354 aa16.2■□□□□ 0.18
NOTCH4-201ENST00000375023 IL13P35225 146 aa16.2■□□□□ 0.18
NOTCH4-201ENST00000375023 POMGNT1Q8WZA1 660 aa16.2■□□□□ 0.18
NOTCH4-201ENST00000375023 TEKT1Q969V4 418 aa16.2■□□□□ 0.18
NOTCH4-201ENST00000375023 A0A0D9SFI3 127 aa16.2■□□□□ 0.18
NOTCH4-201ENST00000375023 CLGNO14967 610 aa16.2■□□□□ 0.18
NOTCH4-201ENST00000375023 SGSM2O43147 1006 aa16.2■□□□□ 0.18
NOTCH4-201ENST00000375023 ADD1P35611 737 aaKnown RBP16.2■□□□□ 0.18
NOTCH4-201ENST00000375023 DENND2CQ68D51 928 aa16.2■□□□□ 0.18
NOTCH4-201ENST00000375023 C1orf228Q6PIY5 440 aa16.2■□□□□ 0.18
NOTCH4-201ENST00000375023 TRIM50Q86XT4 487 aa16.2■□□□□ 0.18
NOTCH4-201ENST00000375023 GPATCH8Q9UKJ3 1502 aaKnown RBP16.2■□□□□ 0.18
NOTCH4-201ENST00000375023 STAM2O75886 525 aa16.2■□□□□ 0.18
NOTCH4-201ENST00000375023 ARMC9Q7Z3E5 817 aa16.2■□□□□ 0.18
NOTCH4-201ENST00000375023 TRIM35Q9UPQ4 493 aa16.2■□□□□ 0.18
NOTCH4-201ENST00000375023 PRAG1Q86YV5 1406 aa16.2■□□□□ 0.18
NOTCH4-201ENST00000375023 ABCA10Q8WWZ4 1543 aa16.2■□□□□ 0.18
NOTCH4-201ENST00000375023 SNAP25P60880 206 aa16.2■□□□□ 0.18
NOTCH4-201ENST00000375023 TRIM14Q14142 442 aa16.2■□□□□ 0.18
NOTCH4-201ENST00000375023 KCTD1Q719H9 257 aa16.2■□□□□ 0.18
NOTCH4-201ENST00000375023 A0A087WWV3 80 aa16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 AP5M1Q9H0R1 490 aa16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 DDX41Q9UJV9 622 aaKnown RBP16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 FLOT1O75955 427 aa16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 RPS6KA2Q15349 733 aa16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 MROH5Q6ZUA9 1318 aa16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 BTDP43251 543 aa16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 OTUD6AQ7L8S5 288 aa16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 RASGRP4Q8TDF6 673 aa16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 DDX25Q9UHL0 483 aaKnown RBP16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 ITM2BQ9Y287 266 aa16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 KCNJ18B7U540 433 aa16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 SESN3P58005 492 aa16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 POLR2FP61218 127 aaKnown RBP16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 SEPT6Q14141 434 aa16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 KCNJ12Q14500 433 aa16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 ERCC6LQ2NKX8 1250 aa16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 KRT71Q3SY84 523 aa16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 CERKLQ49MI3 558 aaPredicted RBP16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 PPM1KQ8N3J5 372 aa16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 ZSCAN10Q96SZ4 725 aaPredicted RBP16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 FEZ2Q9UHY8 353 aaPredicted RBP16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 CD2APQ9Y5K6 639 aa16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 ADCY8P40145 1251 aa16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 KRT27Q7Z3Y8 459 aa16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 DISC1Q9NRI5 854 aa16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 OGFRQ9NZT2 677 aa16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 RFC1P35251 1148 aaPredicted RBP16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 MORC3Q14149 939 aa16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 NKX1-1Q15270 411 aaPredicted RBP16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 IFNLR1Q8IU57 520 aaPredicted RBP16.19■□□□□ 0.18
NOTCH4-201ENST00000375023 MYL3P08590 195 aa16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 CCDC13Q8IYE1 715 aa16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 TRAPPC8Q9Y2L5 1435 aa16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 ARHGAP42A6NI28 874 aa16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 NEURL1BA8MQ27 555 aa16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 OAS2P29728 719 aaKnown RBP16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 SLC12A1Q13621 1099 aa16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 ERO1AQ96HE7 468 aa16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 EFCC1Q9HA90 598 aa16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 GBP1P32455 592 aa16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 ANKRD13CQ8N6S4 541 aa16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 RNF181Q9P0P0 153 aa16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 TRPC5Q9UL62 973 aaPredicted RBP16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 PLEKHG3A1L390 1219 aa16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 PFKFB1P16118 471 aa16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 TMOD1P28289 359 aa16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 TRIM68Q6AZZ1 485 aa16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 ZNF513Q8N8E2 541 aaPredicted RBP16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 LMCD1Q9NZU5 365 aa16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 SWAP70Q9UH65 585 aa16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 PCDHA12Q9UN75 941 aa16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 EIF4G3O43432 1585 aaKnown RBP16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 GBP7Q8N8V2 638 aaPredicted RBP16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 MLKLQ8NB16 471 aa16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 NUP58Q9BVL2 599 aa16.18■□□□□ 0.18
NOTCH4-201ENST00000375023 PTPRKQ15262 1439 aa16.17■□□□□ 0.18
NOTCH4-201ENST00000375023 SLC16A2P36021 539 aa16.17■□□□□ 0.18
NOTCH4-201ENST00000375023 PIK3CAP42336 1068 aa16.17■□□□□ 0.18
NOTCH4-201ENST00000375023 TAOK1Q7L7X3 1001 aa16.17■□□□□ 0.18
NOTCH4-201ENST00000375023 RBM46Q8TBY0 533 aaKnown RBP16.17■□□□□ 0.18
NOTCH4-201ENST00000375023 SEPT9Q9UHD8 586 aaPredicted RBP16.17■□□□□ 0.18
NOTCH4-201ENST00000375023 ESYT2A0FGR8 921 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms