RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 U2AF1L4Q8WU68 220 aaKnown RBP23.35■■□□□ 1.33
TGFBR1-202ENST00000374994 TBC1D22AQ8WUA7 517 aa23.35■■□□□ 1.33
TGFBR1-202ENST00000374994 MLH3Q9UHC1 1453 aa23.35■■□□□ 1.33
TGFBR1-202ENST00000374994 STX2P32856 288 aa23.35■■□□□ 1.33
TGFBR1-202ENST00000374994 ARMC9Q7Z3E5 817 aa23.35■■□□□ 1.33
TGFBR1-202ENST00000374994 MYCT1Q8N699 235 aa23.35■■□□□ 1.33
TGFBR1-202ENST00000374994 TLR7Q9NYK1 1049 aaKnown RBP23.35■■□□□ 1.33
TGFBR1-202ENST00000374994 ABCA8O94911 1581 aa23.35■■□□□ 1.33
TGFBR1-202ENST00000374994 NCBP1Q09161 790 aaKnown RBP23.34■■□□□ 1.33
TGFBR1-202ENST00000374994 GRK7Q8WTQ7 553 aa23.34■■□□□ 1.33
TGFBR1-202ENST00000374994 SAMD9LQ8IVG5 1584 aa23.34■■□□□ 1.33
TGFBR1-202ENST00000374994 PLA2R1Q13018 1463 aa23.34■■□□□ 1.33
TGFBR1-202ENST00000374994 IFNAR1P17181 557 aa23.34■■□□□ 1.33
TGFBR1-202ENST00000374994 RAB3IPQ96QF0 476 aaPredicted RBP23.34■■□□□ 1.33
TGFBR1-202ENST00000374994 GCNT3O95395 438 aa23.34■■□□□ 1.33
TGFBR1-202ENST00000374994 SLC1A4P43007 532 aa23.34■■□□□ 1.33
TGFBR1-202ENST00000374994 CCDC170Q8IYT3 715 aa23.34■■□□□ 1.33
TGFBR1-202ENST00000374994 BPIFA3Q9BQP9 254 aa23.34■■□□□ 1.33
TGFBR1-202ENST00000374994 NOL3O60936 208 aaKnown RBP23.34■■□□□ 1.33
TGFBR1-202ENST00000374994 LIG3P49916 1009 aa23.34■■□□□ 1.33
TGFBR1-202ENST00000374994 LRRC24Q50LG9 513 aa23.34■■□□□ 1.33
TGFBR1-202ENST00000374994 RNF10Q8N5U6 811 aaKnown RBP23.33■■□□□ 1.33
TGFBR1-202ENST00000374994 ARHGEF10LQ9HCE6 1279 aa23.33■■□□□ 1.33
TGFBR1-202ENST00000374994 MAN1B1Q9UKM7 699 aa23.33■■□□□ 1.33
TGFBR1-202ENST00000374994 UFL1O94874 794 aa23.33■■□□□ 1.33
TGFBR1-202ENST00000374994 RUNDC3BQ96NL0 473 aa23.33■■□□□ 1.33
TGFBR1-202ENST00000374994 N4BP1O75113 896 aaKnown RBP23.33■■□□□ 1.33
TGFBR1-202ENST00000374994 PNMA6AP0CW24 399 aaPredicted RBP23.33■■□□□ 1.33
TGFBR1-202ENST00000374994 JAG2Q9Y219 1238 aa23.33■■□□□ 1.33
TGFBR1-202ENST00000374994 KRT15P19012 456 aa23.33■■□□□ 1.33
TGFBR1-202ENST00000374994 RWDD2AQ9UIY3 292 aa23.33■■□□□ 1.33
TGFBR1-202ENST00000374994 PHLDB2Q86SQ0 1253 aa23.33■■□□□ 1.32
TGFBR1-202ENST00000374994 SEMA3EO15041 775 aa23.33■■□□□ 1.32
TGFBR1-202ENST00000374994 UAP1Q16222 522 aaPredicted RBP23.33■■□□□ 1.32
TGFBR1-202ENST00000374994 CNBD1Q8NA66 436 aa23.33■■□□□ 1.32
TGFBR1-202ENST00000374994 GGA1Q9UJY5 639 aa23.33■■□□□ 1.32
TGFBR1-202ENST00000374994 ZNF131P52739 623 aa23.32■■□□□ 1.32
TGFBR1-202ENST00000374994 BACH1O14867 736 aa23.32■■□□□ 1.32
TGFBR1-202ENST00000374994 ZNF658Q5TYW1 1059 aaPredicted RBP23.32■■□□□ 1.32
TGFBR1-202ENST00000374994 TBC1D7Q9P0N9 293 aa23.32■■□□□ 1.32
TGFBR1-202ENST00000374994 ABCC12Q96J65 1359 aa23.32■■□□□ 1.32
TGFBR1-202ENST00000374994 PABPN1LA6NDY0 278 aaKnown RBP23.32■■□□□ 1.32
TGFBR1-202ENST00000374994 ATP1A2P50993 1020 aa23.32■■□□□ 1.32
TGFBR1-202ENST00000374994 SH3BGRP55822 239 aaPredicted RBP23.32■■□□□ 1.32
TGFBR1-202ENST00000374994 FAM47AQ5JRC9 791 aa23.32■■□□□ 1.32
TGFBR1-202ENST00000374994 PNMA1Q8ND90 353 aa23.32■■□□□ 1.32
TGFBR1-202ENST00000374994 CNOT6LQ96LI5 555 aaKnown RBP23.32■■□□□ 1.32
TGFBR1-202ENST00000374994 ZBTB21Q9ULJ3 1066 aa23.32■■□□□ 1.32
TGFBR1-202ENST00000374994 FAM26FQ5R3K3 315 aa23.32■■□□□ 1.32
TGFBR1-202ENST00000374994 FAM114A2Q9NRY5 505 aa23.32■■□□□ 1.32
TGFBR1-202ENST00000374994 FAN1Q9Y2M0 1017 aa23.32■■□□□ 1.32
TGFBR1-202ENST00000374994 PCDHB13Q9Y5F0 798 aa23.32■■□□□ 1.32
TGFBR1-202ENST00000374994 CCT5P48643 541 aa23.32■■□□□ 1.32
TGFBR1-202ENST00000374994 GPBP1Q86WP2 473 aa23.32■■□□□ 1.32
TGFBR1-202ENST00000374994 ORAI2Q96SN7 254 aa23.32■■□□□ 1.32
TGFBR1-202ENST00000374994 CHMP2AO43633 222 aa23.31■■□□□ 1.32
TGFBR1-202ENST00000374994 MMP1P03956 469 aa23.31■■□□□ 1.32
TGFBR1-202ENST00000374994 ANKRD20A3Q5VUR7 823 aa23.31■■□□□ 1.32
TGFBR1-202ENST00000374994 ARHGEF2Q92974 986 aaKnown RBP23.31■■□□□ 1.32
TGFBR1-202ENST00000374994 OSBPL5Q9H0X9 879 aaPredicted RBP23.31■■□□□ 1.32
TGFBR1-202ENST00000374994 I3L4J1 428 aa23.31■■□□□ 1.32
TGFBR1-202ENST00000374994 PDE8BO95263 885 aa23.31■■□□□ 1.32
TGFBR1-202ENST00000374994 SNX16P57768 344 aa23.31■■□□□ 1.32
TGFBR1-202ENST00000374994 PLA2G4DQ86XP0 818 aa23.31■■□□□ 1.32
TGFBR1-202ENST00000374994 VPS52Q8N1B4 723 aa23.31■■□□□ 1.32
TGFBR1-202ENST00000374994 TROVE2P10155 538 aaKnown RBP eCLIP23.31■■□□□ 1.32
TGFBR1-202ENST00000374994 BBOF1Q8ND07 529 aa23.31■■□□□ 1.32
TGFBR1-202ENST00000374994 SSX2IPQ9Y2D8 614 aa23.31■■□□□ 1.32
TGFBR1-202ENST00000374994 HIP1RO75146 1068 aa23.3■■□□□ 1.32
TGFBR1-202ENST00000374994 VTI1AQ96AJ9 217 aa23.3■■□□□ 1.32
TGFBR1-202ENST00000374994 SRPRBQ9Y5M8 271 aaKnown RBP23.3■■□□□ 1.32
TGFBR1-202ENST00000374994 LIFRP42702 1097 aa23.3■■□□□ 1.32
TGFBR1-202ENST00000374994 GUCY2DQ02846 1103 aa23.3■■□□□ 1.32
TGFBR1-202ENST00000374994 SLFN12Q8IYM2 578 aa23.3■■□□□ 1.32
TGFBR1-202ENST00000374994 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.3■■□□□ 1.32
TGFBR1-202ENST00000374994 TYW1Q9NV66 732 aaKnown RBP23.3■■□□□ 1.32
TGFBR1-202ENST00000374994 BUB1O43683 1085 aa23.3■■□□□ 1.32
TGFBR1-202ENST00000374994 ZBED6P86452 979 aa23.3■■□□□ 1.32
TGFBR1-202ENST00000374994 APBB1IPQ7Z5R6 666 aaPredicted RBP23.3■■□□□ 1.32
TGFBR1-202ENST00000374994 PLCD3Q8N3E9 789 aa23.3■■□□□ 1.32
TGFBR1-202ENST00000374994 SH2B2O14492 632 aaPredicted RBP23.29■■□□□ 1.32
TGFBR1-202ENST00000374994 NT5C2P49902 561 aa23.29■■□□□ 1.32
TGFBR1-202ENST00000374994 P2RX5Q93086 422 aa23.29■■□□□ 1.32
TGFBR1-202ENST00000374994 RIC8AQ9NPQ8 531 aa23.29■■□□□ 1.32
TGFBR1-202ENST00000374994 RFX7Q2KHR2 1363 aa23.29■■□□□ 1.32
TGFBR1-202ENST00000374994 POLR2FP61218 127 aaKnown RBP23.29■■□□□ 1.32
TGFBR1-202ENST00000374994 ALS2CLQ60I27 953 aa23.29■■□□□ 1.32
TGFBR1-202ENST00000374994 RAB3IL1Q8TBN0 382 aa23.29■■□□□ 1.32
TGFBR1-202ENST00000374994 ALDH8A1Q9H2A2 487 aaPredicted RBP23.29■■□□□ 1.32
TGFBR1-202ENST00000374994 BIN2Q9UBW5 565 aaPredicted RBP23.29■■□□□ 1.32
TGFBR1-202ENST00000374994 JRKLQ9Y4A0 524 aa23.29■■□□□ 1.32
TGFBR1-202ENST00000374994 MYO5CQ9NQX4 1742 aa23.29■■□□□ 1.32
TGFBR1-202ENST00000374994 TECP42680 631 aa23.29■■□□□ 1.32
TGFBR1-202ENST00000374994 STRN3Q13033 797 aa23.29■■□□□ 1.32
TGFBR1-202ENST00000374994 CMTR1Q8N1G2 835 aaKnown RBP23.29■■□□□ 1.32
TGFBR1-202ENST00000374994 CFAP57Q96MR6 1250 aa23.29■■□□□ 1.32
TGFBR1-202ENST00000374994 YEATS2Q9ULM3 1422 aa23.28■■□□□ 1.32
TGFBR1-202ENST00000374994 FAM212AQ96EL1 285 aa23.28■■□□□ 1.32
TGFBR1-202ENST00000374994 THAP9Q9H5L6 903 aa23.28■■□□□ 1.32
TGFBR1-202ENST00000374994 SARNPP82979 210 aaKnown RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms