RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 ZKSCAN5Q9Y2L8 839 aa20.54■□□□□ 0.88
HLA-DQB1-201ENST00000374943 FRMPD2Q68DX3 1309 aaPredicted RBP20.53■□□□□ 0.88
HLA-DQB1-201ENST00000374943 SPDYE2BA6NHP3 402 aa20.53■□□□□ 0.88
HLA-DQB1-201ENST00000374943 PSMD14O00487 310 aa20.53■□□□□ 0.88
HLA-DQB1-201ENST00000374943 MPHOSPH10O00566 681 aaKnown RBP20.53■□□□□ 0.88
HLA-DQB1-201ENST00000374943 POLR2DO15514 142 aaKnown RBP20.53■□□□□ 0.88
HLA-DQB1-201ENST00000374943 SPDYE6P0CI01 402 aa20.53■□□□□ 0.88
HLA-DQB1-201ENST00000374943 EIF6P56537 245 aaKnown RBP20.53■□□□□ 0.88
HLA-DQB1-201ENST00000374943 PLCB2Q00722 1185 aa20.53■□□□□ 0.88
HLA-DQB1-201ENST00000374943 CERKLQ49MI3 558 aaPredicted RBP20.53■□□□□ 0.88
HLA-DQB1-201ENST00000374943 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.53■□□□□ 0.88
HLA-DQB1-201ENST00000374943 PLA2G4DQ86XP0 818 aa20.53■□□□□ 0.88
HLA-DQB1-201ENST00000374943 ZSCAN29Q8IWY8 852 aaPredicted RBP20.53■□□□□ 0.88
HLA-DQB1-201ENST00000374943 TRIM34Q9BYJ4 488 aa20.53■□□□□ 0.88
HLA-DQB1-201ENST00000374943 PIM2Q9P1W9 311 aa20.53■□□□□ 0.88
HLA-DQB1-201ENST00000374943 HDAC9Q9UKV0 1011 aa20.53■□□□□ 0.88
HLA-DQB1-201ENST00000374943 A0A087WWV3 80 aa20.52■□□□□ 0.88
HLA-DQB1-201ENST00000374943 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.52■□□□□ 0.88
HLA-DQB1-201ENST00000374943 ACTN4O43707 911 aaKnown RBP20.52■□□□□ 0.88
HLA-DQB1-201ENST00000374943 PNOCQ13519 176 aa20.52■□□□□ 0.88
HLA-DQB1-201ENST00000374943 KRT25Q7Z3Z0 450 aa20.52■□□□□ 0.88
HLA-DQB1-201ENST00000374943 C4orf32Q8N8J7 132 aa20.52■□□□□ 0.88
HLA-DQB1-201ENST00000374943 UBA5Q9GZZ9 404 aa20.52■□□□□ 0.88
HLA-DQB1-201ENST00000374943 KANSL2Q9H9L4 492 aa20.52■□□□□ 0.88
HLA-DQB1-201ENST00000374943 RTN4Q9NQC3 1192 aaKnown RBP20.52■□□□□ 0.88
HLA-DQB1-201ENST00000374943 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.52■□□□□ 0.88
HLA-DQB1-201ENST00000374943 BECN2A8MW95 431 aa20.51■□□□□ 0.87
HLA-DQB1-201ENST00000374943 ZNF75DP51815 510 aa20.51■□□□□ 0.87
HLA-DQB1-201ENST00000374943 NT5DC1Q5TFE4 455 aa20.51■□□□□ 0.87
HLA-DQB1-201ENST00000374943 PPP1R18Q6NYC8 613 aa20.51■□□□□ 0.87
HLA-DQB1-201ENST00000374943 TMEM179Q6ZVK1 233 aa20.51■□□□□ 0.87
HLA-DQB1-201ENST00000374943 USP49Q70CQ1 688 aa20.51■□□□□ 0.87
HLA-DQB1-201ENST00000374943 HOMER1Q86YM7 354 aa20.51■□□□□ 0.87
HLA-DQB1-201ENST00000374943 RASGRP4Q8TDF6 673 aa20.51■□□□□ 0.87
HLA-DQB1-201ENST00000374943 TMOD2Q9NZR1 351 aa20.51■□□□□ 0.87
HLA-DQB1-201ENST00000374943 ZNRF3Q9ULT6 936 aa20.51■□□□□ 0.87
HLA-DQB1-201ENST00000374943 RAD17O75943 681 aa20.51■□□□□ 0.87
HLA-DQB1-201ENST00000374943 MSNP26038 577 aaKnown RBP20.51■□□□□ 0.87
HLA-DQB1-201ENST00000374943 MCM7P33993 719 aa20.51■□□□□ 0.87
HLA-DQB1-201ENST00000374943 POSTNQ15063 836 aa20.51■□□□□ 0.87
HLA-DQB1-201ENST00000374943 MTMR14Q8NCE2 650 aa20.51■□□□□ 0.87
HLA-DQB1-201ENST00000374943 AGBL3Q8NEM8 1001 aa20.51■□□□□ 0.87
HLA-DQB1-201ENST00000374943 DCAF4Q8WV16 495 aa20.51■□□□□ 0.87
HLA-DQB1-201ENST00000374943 SYMPKQ92797 1274 aaKnown RBP20.51■□□□□ 0.87
HLA-DQB1-201ENST00000374943 CCDC34Q96HJ3 373 aa20.51■□□□□ 0.87
HLA-DQB1-201ENST00000374943 PYM1Q9BRP8 204 aaKnown RBP20.51■□□□□ 0.87
HLA-DQB1-201ENST00000374943 MTFR1LQ9H019 292 aa20.51■□□□□ 0.87
HLA-DQB1-201ENST00000374943 SERTAD1Q9UHV2 236 aa20.51■□□□□ 0.87
HLA-DQB1-201ENST00000374943 SMCO2A6NFE2 343 aa20.5■□□□□ 0.87
HLA-DQB1-201ENST00000374943 LAD1O00515 517 aa20.5■□□□□ 0.87
HLA-DQB1-201ENST00000374943 POLD1P28340 1107 aa20.5■□□□□ 0.87
HLA-DQB1-201ENST00000374943 CDC25BP30305 580 aa20.5■□□□□ 0.87
HLA-DQB1-201ENST00000374943 NIM1KQ8IY84 436 aa20.5■□□□□ 0.87
HLA-DQB1-201ENST00000374943 AOPEPQ8N6M6 819 aa20.5■□□□□ 0.87
HLA-DQB1-201ENST00000374943 MTMR8Q96EF0 704 aa20.5■□□□□ 0.87
HLA-DQB1-201ENST00000374943 VWA3AA6NCI4 1184 aa20.49■□□□□ 0.87
HLA-DQB1-201ENST00000374943 DCAF8L1A6NGE4 600 aa20.49■□□□□ 0.87
HLA-DQB1-201ENST00000374943 FAM196BA6NMK8 535 aa20.49■□□□□ 0.87
HLA-DQB1-201ENST00000374943 BIN1O00499 593 aa20.49■□□□□ 0.87
HLA-DQB1-201ENST00000374943 TPM3P06753 285 aa20.49■□□□□ 0.87
HLA-DQB1-201ENST00000374943 SLURP2P0DP57 97 aa20.49■□□□□ 0.87
HLA-DQB1-201ENST00000374943 LONP1P36776 959 aaKnown RBP20.49■□□□□ 0.87
HLA-DQB1-201ENST00000374943 ORC2Q13416 577 aaPredicted RBP20.49■□□□□ 0.87
HLA-DQB1-201ENST00000374943 FKBP1CQ5VVH2 108 aa20.49■□□□□ 0.87
HLA-DQB1-201ENST00000374943 EPSTI1Q96J88 318 aa20.49■□□□□ 0.87
HLA-DQB1-201ENST00000374943 JMJD4Q9H9V9 463 aa20.49■□□□□ 0.87
HLA-DQB1-201ENST00000374943 VAT1LQ9HCJ6 419 aa20.49■□□□□ 0.87
HLA-DQB1-201ENST00000374943 GPCPD1Q9NPB8 672 aa20.49■□□□□ 0.87
HLA-DQB1-201ENST00000374943 HERC5Q9UII4 1024 aaKnown RBP20.49■□□□□ 0.87
HLA-DQB1-201ENST00000374943 PCDHA5Q9Y5H7 936 aa20.49■□□□□ 0.87
HLA-DQB1-201ENST00000374943 PNMA6FA0A0J9YX94 578 aa20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 GOLGA6L6A8MZA4 724 aa20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 IKBKBO14920 756 aa20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 ZBTB7AO95365 584 aa20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 SLFN14P0C7P3 912 aa20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 EEF2P13639 858 aaKnown RBP20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 SARSP49591 514 aaKnown RBP20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 NONOQ15233 471 aaKnown RBP eCLIP20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 DLGAP5Q15398 846 aa20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 SPDYE2Q495Y8 402 aa20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 OGFOD1Q8N543 542 aa20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 SPATA20Q8TB22 786 aa20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 TRIM5Q9C035 493 aa20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 SYNPO2Q9UMS6 1093 aa20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 A0A087X0B3 334 aa20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 PRPHP41219 470 aa20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 IL17AQ16552 155 aa20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 INF2Q27J81 1249 aa20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 ABCB5Q2M3G0 1257 aa20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 DALRD3Q5D0E6 543 aaKnown RBP20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 SH3RF1Q7Z6J0 888 aa20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 ADGRF4Q8IZF3 695 aa20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 TRIML1Q8N9V2 468 aa20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 FAM151AQ8WW52 585 aa20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 MRFAP1L1Q96HT8 127 aa20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 ZNF70Q9UC06 446 aaPredicted RBP20.48■□□□□ 0.87
HLA-DQB1-201ENST00000374943 MYH7BA7E2Y1 1941 aa20.47■□□□□ 0.87
HLA-DQB1-201ENST00000374943 SMTNL1A8MU46 457 aa20.47■□□□□ 0.87
HLA-DQB1-201ENST00000374943 FOXN1O15353 648 aa20.47■□□□□ 0.87
HLA-DQB1-201ENST00000374943 ZNF500O60304 480 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms