RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 BIN2Q9UBW5 565 aaPredicted RBP19.28■□□□□ 0.68
RXRB-201ENST00000374680 PCDHA6Q9UN73 950 aa19.28■□□□□ 0.68
RXRB-201ENST00000374680 PCDHA8Q9Y5H6 950 aa19.28■□□□□ 0.68
RXRB-201ENST00000374680 GRAPQ13588 217 aa19.27■□□□□ 0.68
RXRB-201ENST00000374680 SYCP1Q15431 976 aa19.27■□□□□ 0.68
RXRB-201ENST00000374680 GRAPLQ8TC17 118 aaPredicted RBP19.27■□□□□ 0.68
RXRB-201ENST00000374680 LRRC4BQ9NT99 713 aa19.27■□□□□ 0.68
RXRB-201ENST00000374680 CCP110O43303 1012 aa19.27■□□□□ 0.67
RXRB-201ENST00000374680 CCNT1O60563 726 aaKnown RBP19.27■□□□□ 0.67
RXRB-201ENST00000374680 SBK1Q52WX2 424 aa19.27■□□□□ 0.67
RXRB-201ENST00000374680 MFSD14BQ5SR56 506 aa19.27■□□□□ 0.67
RXRB-201ENST00000374680 BMP15O95972 392 aa19.26■□□□□ 0.67
RXRB-201ENST00000374680 RASA1P20936 1047 aa19.26■□□□□ 0.67
RXRB-201ENST00000374680 TXLNAP40222 546 aa19.26■□□□□ 0.67
RXRB-201ENST00000374680 UBXN1Q04323 297 aa19.26■□□□□ 0.67
RXRB-201ENST00000374680 PAK1Q13153 545 aa19.26■□□□□ 0.67
RXRB-201ENST00000374680 TIAM2Q8IVF5 1701 aa19.26■□□□□ 0.67
RXRB-201ENST00000374680 ARAP2Q8WZ64 1704 aa19.26■□□□□ 0.67
RXRB-201ENST00000374680 GYPCP04921 128 aa19.26■□□□□ 0.67
RXRB-201ENST00000374680 CDK8P49336 464 aa19.26■□□□□ 0.67
RXRB-201ENST00000374680 LRRC15Q8TF66 581 aa19.26■□□□□ 0.67
RXRB-201ENST00000374680 FEZ1Q99689 392 aa19.26■□□□□ 0.67
RXRB-201ENST00000374680 CD209Q9NNX6 404 aa19.26■□□□□ 0.67
RXRB-201ENST00000374680 TMEM260Q9NX78 707 aa19.26■□□□□ 0.67
RXRB-201ENST00000374680 TOM1O60784 492 aa19.25■□□□□ 0.67
RXRB-201ENST00000374680 PCP11498 1178 aaKnown RBP19.25■□□□□ 0.67
RXRB-201ENST00000374680 CALML3P27482 149 aa19.25■□□□□ 0.67
RXRB-201ENST00000374680 TECP42680 631 aa19.25■□□□□ 0.67
RXRB-201ENST00000374680 ZNF569Q5MCW4 686 aa19.25■□□□□ 0.67
RXRB-201ENST00000374680 PRR5LQ6MZQ0 368 aa19.25■□□□□ 0.67
RXRB-201ENST00000374680 ZNF804AQ7Z570 1209 aa19.25■□□□□ 0.67
RXRB-201ENST00000374680 ELOA2Q8IYF1 753 aaPredicted RBP19.25■□□□□ 0.67
RXRB-201ENST00000374680 LRRC47Q8N1G4 583 aaKnown RBP19.25■□□□□ 0.67
RXRB-201ENST00000374680 C4orf32Q8N8J7 132 aa19.25■□□□□ 0.67
RXRB-201ENST00000374680 MKRN1Q9UHC7 482 aaKnown RBP19.25■□□□□ 0.67
RXRB-201ENST00000374680 DGKHQ86XP1 1220 aa19.25■□□□□ 0.67
RXRB-201ENST00000374680 GJA10Q969M2 543 aa19.25■□□□□ 0.67
RXRB-201ENST00000374680 PIGSQ96S52 555 aa19.25■□□□□ 0.67
RXRB-201ENST00000374680 SLF1Q9BQI6 1058 aa19.25■□□□□ 0.67
RXRB-201ENST00000374680 KCNJ18B7U540 433 aa19.24■□□□□ 0.67
RXRB-201ENST00000374680 CCDC175P0C221 793 aa19.24■□□□□ 0.67
RXRB-201ENST00000374680 GTF2IP78347 998 aa19.24■□□□□ 0.67
RXRB-201ENST00000374680 KCNJ12Q14500 433 aa19.24■□□□□ 0.67
RXRB-201ENST00000374680 CCDC178Q5BJE1 867 aa19.24■□□□□ 0.67
RXRB-201ENST00000374680 ZNF771Q7L3S4 317 aaPredicted RBP19.24■□□□□ 0.67
RXRB-201ENST00000374680 COA7Q96BR5 231 aa19.24■□□□□ 0.67
RXRB-201ENST00000374680 CEP95Q96GE4 821 aa19.24■□□□□ 0.67
RXRB-201ENST00000374680 SMCO2A6NFE2 343 aa19.24■□□□□ 0.67
RXRB-201ENST00000374680 GTPBP6O43824 516 aaPredicted RBP19.24■□□□□ 0.67
RXRB-201ENST00000374680 CDKAL1Q5VV42 579 aa19.24■□□□□ 0.67
RXRB-201ENST00000374680 CHP1Q99653 195 aa19.24■□□□□ 0.67
RXRB-201ENST00000374680 SRRTQ9BXP5 876 aaKnown RBP19.24■□□□□ 0.67
RXRB-201ENST00000374680 GPCPD1Q9NPB8 672 aa19.24■□□□□ 0.67
RXRB-201ENST00000374680 PLCH1Q4KWH8 1693 aa19.24■□□□□ 0.67
RXRB-201ENST00000374680 USP17L5A8MUK1 530 aa19.24■□□□□ 0.67
RXRB-201ENST00000374680 KCNJ6P48051 423 aa19.24■□□□□ 0.67
RXRB-201ENST00000374680 COPB1P53618 953 aaKnown RBP19.24■□□□□ 0.67
RXRB-201ENST00000374680 NAALADL2Q58DX5 795 aa19.24■□□□□ 0.67
RXRB-201ENST00000374680 PHLPP2Q6ZVD8 1323 aa19.24■□□□□ 0.67
RXRB-201ENST00000374680 KRT9P35527 623 aa19.23■□□□□ 0.67
RXRB-201ENST00000374680 TXKP42681 527 aa19.23■□□□□ 0.67
RXRB-201ENST00000374680 PPP2R3AQ06190 1150 aa19.23■□□□□ 0.67
RXRB-201ENST00000374680 GRM4Q14833 912 aa19.23■□□□□ 0.67
RXRB-201ENST00000374680 VPS72Q15906 364 aa19.23■□□□□ 0.67
RXRB-201ENST00000374680 DISC1Q9NRI5 854 aa19.23■□□□□ 0.67
RXRB-201ENST00000374680 ADGRG1Q9Y653 693 aa19.23■□□□□ 0.67
RXRB-201ENST00000374680 STXBP3O00186 592 aa19.23■□□□□ 0.67
RXRB-201ENST00000374680 RC3H1Q5TC82 1133 aaKnown RBP19.23■□□□□ 0.67
RXRB-201ENST00000374680 TRIM47Q96LD4 638 aa19.23■□□□□ 0.67
RXRB-201ENST00000374680 TRIM10Q9UDY6 481 aa19.23■□□□□ 0.67
RXRB-201ENST00000374680 NKRFO15226 690 aaKnown RBP eCLIP19.22■□□□□ 0.67
RXRB-201ENST00000374680 MFAP3LO75121 409 aa19.22■□□□□ 0.67
RXRB-201ENST00000374680 SCNN1DP51172 638 aa19.22■□□□□ 0.67
RXRB-201ENST00000374680 TXNRD1Q16881 649 aa19.22■□□□□ 0.67
RXRB-201ENST00000374680 RTFDC1Q9BY42 306 aaPredicted RBP19.22■□□□□ 0.67
RXRB-201ENST00000374680 POLR3GO15318 223 aaPredicted RBP19.22■□□□□ 0.67
RXRB-201ENST00000374680 MYO1BO43795 1136 aa19.22■□□□□ 0.67
RXRB-201ENST00000374680 PCMTD1Q96MG8 357 aaPredicted RBP19.22■□□□□ 0.67
RXRB-201ENST00000374680 POLLQ9UGP5 575 aa19.22■□□□□ 0.67
RXRB-201ENST00000374680 PARP1P09874 1014 aaKnown RBP19.21■□□□□ 0.67
RXRB-201ENST00000374680 PLCG1P19174 1290 aa19.21■□□□□ 0.67
RXRB-201ENST00000374680 KIF4BQ2VIQ3 1234 aa19.21■□□□□ 0.67
RXRB-201ENST00000374680 TCP11X2Q5H9J9 407 aa19.21■□□□□ 0.67
RXRB-201ENST00000374680 ZNF658Q5TYW1 1059 aaPredicted RBP19.21■□□□□ 0.67
RXRB-201ENST00000374680 MEX3CQ5U5Q3 659 aaKnown RBP19.21■□□□□ 0.67
RXRB-201ENST00000374680 GGA1Q9UJY5 639 aa19.21■□□□□ 0.67
RXRB-201ENST00000374680 PRDM4Q9UKN5 801 aa19.21■□□□□ 0.67
RXRB-201ENST00000374680 LEMD3Q9Y2U8 911 aa19.21■□□□□ 0.67
RXRB-201ENST00000374680 TADA3O75528 432 aa19.21■□□□□ 0.67
RXRB-201ENST00000374680 SERPINB2P05120 415 aa19.21■□□□□ 0.67
RXRB-201ENST00000374680 FCER1AP12319 257 aa19.21■□□□□ 0.67
RXRB-201ENST00000374680 KLK7P49862 253 aa19.21■□□□□ 0.67
RXRB-201ENST00000374680 ERVK-24P63145 666 aa19.21■□□□□ 0.67
RXRB-201ENST00000374680 KRT222Q8N1A0 295 aa19.21■□□□□ 0.67
RXRB-201ENST00000374680 RNF216Q9NWF9 866 aaPredicted RBP19.21■□□□□ 0.67
RXRB-201ENST00000374680 BARHL2Q9NY43 387 aa19.21■□□□□ 0.67
RXRB-201ENST00000374680 LDHCP07864 332 aa19.21■□□□□ 0.67
RXRB-201ENST00000374680 TPM1P09493 284 aa19.21■□□□□ 0.67
RXRB-201ENST00000374680 LONP1P36776 959 aaKnown RBP19.21■□□□□ 0.67
RXRB-201ENST00000374680 TRAPPC10P48553 1259 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms