RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 FBXO2Q9UK22 296 aaPredicted RBP14.42□□□□□ -0.1
PRPF4-201ENST00000374198 LRRC10BA6NIK2 292 aa14.42□□□□□ -0.1
PRPF4-201ENST00000374198 E7EVH7 732 aa14.42□□□□□ -0.1
PRPF4-201ENST00000374198 KRT86O43790 486 aa14.42□□□□□ -0.1
PRPF4-201ENST00000374198 PTPREP23469 700 aa14.42□□□□□ -0.1
PRPF4-201ENST00000374198 ITIH3Q06033 890 aa14.42□□□□□ -0.1
PRPF4-201ENST00000374198 NBPF10Q6P3W6 841 aaKnown RBP14.42□□□□□ -0.1
PRPF4-201ENST00000374198 TTLL7Q6ZT98 887 aa14.42□□□□□ -0.1
PRPF4-201ENST00000374198 SPDL1Q96EA4 605 aa14.42□□□□□ -0.1
PRPF4-201ENST00000374198 COPRSQ9NQ92 184 aa14.42□□□□□ -0.1
PRPF4-201ENST00000374198 LIMA1Q9UHB6 759 aaKnown RBP14.42□□□□□ -0.1
PRPF4-201ENST00000374198 IDEP14735 1019 aa14.41□□□□□ -0.1
PRPF4-201ENST00000374198 SSR1P43307 286 aaKnown RBP14.41□□□□□ -0.1
PRPF4-201ENST00000374198 ANKRD20A8PQ5CZ79 823 aa14.41□□□□□ -0.1
PRPF4-201ENST00000374198 CDCA2Q69YH5 1023 aaPredicted RBP14.41□□□□□ -0.1
PRPF4-201ENST00000374198 MB21D2Q8IYB1 491 aaPredicted RBP14.41□□□□□ -0.1
PRPF4-201ENST00000374198 RASSF8Q8NHQ8 419 aa14.41□□□□□ -0.1
PRPF4-201ENST00000374198 THSD7AQ9UPZ6 1657 aa14.41□□□□□ -0.1
PRPF4-201ENST00000374198 MAST3O60307 1309 aa14.41□□□□□ -0.1
PRPF4-201ENST00000374198 ANKRD18BA2A2Z9 1011 aa14.41□□□□□ -0.1
PRPF4-201ENST00000374198 ZNF233A6NK53 670 aa14.41□□□□□ -0.1
PRPF4-201ENST00000374198 MGRN1O60291 552 aa14.41□□□□□ -0.1
PRPF4-201ENST00000374198 KRT83P78385 493 aa14.41□□□□□ -0.1
PRPF4-201ENST00000374198 SLC7A5Q01650 507 aa14.41□□□□□ -0.1
PRPF4-201ENST00000374198 SEMA3FQ13275 785 aa14.41□□□□□ -0.1
PRPF4-201ENST00000374198 XRCC4Q13426 336 aa14.41□□□□□ -0.1
PRPF4-201ENST00000374198 SPRED3Q2MJR0 410 aa14.41□□□□□ -0.1
PRPF4-201ENST00000374198 ZNF572Q7Z3I7 529 aaPredicted RBP14.41□□□□□ -0.1
PRPF4-201ENST00000374198 KIAA1328Q86T90 577 aa14.41□□□□□ -0.1
PRPF4-201ENST00000374198 CREG2Q8IUH2 290 aa14.41□□□□□ -0.1
PRPF4-201ENST00000374198 IQCKQ8N0W5 287 aa14.41□□□□□ -0.1
PRPF4-201ENST00000374198 CCDC26Q8TAB7 109 aa14.41□□□□□ -0.1
PRPF4-201ENST00000374198 VPS16Q9H269 839 aa14.41□□□□□ -0.1
PRPF4-201ENST00000374198 ANTXR2P58335 489 aa14.4□□□□□ -0.1
PRPF4-201ENST00000374198 ACCSLQ4AC99 568 aa14.4□□□□□ -0.1
PRPF4-201ENST00000374198 OR8K1Q8NGG5 319 aa14.4□□□□□ -0.1
PRPF4-201ENST00000374198 LMBR1Q8WVP7 490 aa14.4□□□□□ -0.1
PRPF4-201ENST00000374198 PAG1Q9NWQ8 432 aa14.4□□□□□ -0.1
PRPF4-201ENST00000374198 STIM2Q9P246 746 aa14.4□□□□□ -0.1
PRPF4-201ENST00000374198 PPP1R3GB7ZBB8 358 aa14.4□□□□□ -0.1
PRPF4-201ENST00000374198 TNFRSF8P28908 595 aa14.4□□□□□ -0.1
PRPF4-201ENST00000374198 NBPF9Q3BBW0 867 aa14.4□□□□□ -0.1
PRPF4-201ENST00000374198 EPHA10Q5JZY3 1008 aa14.4□□□□□ -0.1
PRPF4-201ENST00000374198 CFAP58Q5T655 872 aa14.4□□□□□ -0.1
PRPF4-201ENST00000374198 MICAL1Q8TDZ2 1067 aa14.4□□□□□ -0.1
PRPF4-201ENST00000374198 COPB1P53618 953 aaKnown RBP14.39□□□□□ -0.11
PRPF4-201ENST00000374198 RWDD2BP57060 319 aa14.39□□□□□ -0.11
PRPF4-201ENST00000374198 HAND2P61296 217 aa14.39□□□□□ -0.11
PRPF4-201ENST00000374198 MRPS25P82663 173 aaKnown RBP14.39□□□□□ -0.11
PRPF4-201ENST00000374198 DDB1Q16531 1140 aa14.39□□□□□ -0.11
PRPF4-201ENST00000374198 PPP4R3AQ6IN85 833 aa14.39□□□□□ -0.11
PRPF4-201ENST00000374198 ZNF579Q8NAF0 562 aaKnown RBP14.39□□□□□ -0.11
PRPF4-201ENST00000374198 SPATA4Q8NEY3 305 aa14.39□□□□□ -0.11
PRPF4-201ENST00000374198 SAAL1Q96ER3 474 aa14.39□□□□□ -0.11
PRPF4-201ENST00000374198 CCDC43Q96MW1 224 aaKnown RBP14.39□□□□□ -0.11
PRPF4-201ENST00000374198 SH2B2O14492 632 aaPredicted RBP14.39□□□□□ -0.11
PRPF4-201ENST00000374198 OPLAHO14841 1288 aa14.39□□□□□ -0.11
PRPF4-201ENST00000374198 CDKL5O76039 1030 aa14.39□□□□□ -0.11
PRPF4-201ENST00000374198 SCTRP47872 440 aa14.39□□□□□ -0.11
PRPF4-201ENST00000374198 TRIM29Q14134 588 aa14.39□□□□□ -0.11
PRPF4-201ENST00000374198 TAX1BP1Q86VP1 789 aa14.39□□□□□ -0.11
PRPF4-201ENST00000374198 SMYD4Q8IYR2 804 aaPredicted RBP14.39□□□□□ -0.11
PRPF4-201ENST00000374198 C3orf20Q8ND61 904 aa14.39□□□□□ -0.11
PRPF4-201ENST00000374198 CDCA7Q9BWT1 371 aaPredicted RBP14.39□□□□□ -0.11
PRPF4-201ENST00000374198 LACRTQ9GZZ8 138 aa14.39□□□□□ -0.11
PRPF4-201ENST00000374198 LGR6Q9HBX8 967 aa14.39□□□□□ -0.11
PRPF4-201ENST00000374198 SNX12Q9UMY4 172 aa14.39□□□□□ -0.11
PRPF4-201ENST00000374198 SH3BP1Q9Y3L3 701 aa14.39□□□□□ -0.11
PRPF4-201ENST00000374198 RIPOR2Q9Y4F9 1068 aa14.39□□□□□ -0.11
PRPF4-201ENST00000374198 PPARAQ07869 468 aa14.39□□□□□ -0.11
PRPF4-201ENST00000374198 IMMTQ16891 758 aaKnown RBP14.39□□□□□ -0.11
PRPF4-201ENST00000374198 LACTB2Q53H82 288 aaPredicted RBP14.39□□□□□ -0.11
PRPF4-201ENST00000374198 TICAM2Q86XR7 235 aa14.39□□□□□ -0.11
PRPF4-201ENST00000374198 CD302Q8IX05 232 aa14.39□□□□□ -0.11
PRPF4-201ENST00000374198 C1orf131Q8NDD1 294 aaKnown RBP14.39□□□□□ -0.11
PRPF4-201ENST00000374198 ATP6V1G3Q96LB4 118 aa14.39□□□□□ -0.11
PRPF4-201ENST00000374198 PPANQ9NQ55 473 aaKnown RBP14.39□□□□□ -0.11
PRPF4-201ENST00000374198 TTC26A0AVF1 554 aa14.38□□□□□ -0.11
PRPF4-201ENST00000374198 RCCD1A6NED2 376 aa14.38□□□□□ -0.11
PRPF4-201ENST00000374198 PEX19P40855 299 aa14.38□□□□□ -0.11
PRPF4-201ENST00000374198 TOB1P50616 345 aaPredicted RBP14.38□□□□□ -0.11
PRPF4-201ENST00000374198 PTPN12Q05209 780 aaKnown RBP14.38□□□□□ -0.11
PRPF4-201ENST00000374198 ITGB3BPQ13352 177 aaPredicted RBP14.38□□□□□ -0.11
PRPF4-201ENST00000374198 TTF1Q15361 905 aaPredicted RBP14.38□□□□□ -0.11
PRPF4-201ENST00000374198 GLE1Q53GS7 698 aaKnown RBP14.38□□□□□ -0.11
PRPF4-201ENST00000374198 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.38□□□□□ -0.11
PRPF4-201ENST00000374198 PHKBQ93100 1093 aa14.38□□□□□ -0.11
PRPF4-201ENST00000374198 DNAJC7Q99615 494 aa14.38□□□□□ -0.11
PRPF4-201ENST00000374198 TAB2Q9NYJ8 693 aa14.38□□□□□ -0.11
PRPF4-201ENST00000374198 M0R2C6 588 aa14.38□□□□□ -0.11
PRPF4-201ENST00000374198 RNF113AO15541 343 aaKnown RBP14.38□□□□□ -0.11
PRPF4-201ENST00000374198 ATP6V1G2O95670 118 aa14.38□□□□□ -0.11
PRPF4-201ENST00000374198 MATR3P43243 847 aaKnown RBP eCLIP14.38□□□□□ -0.11
PRPF4-201ENST00000374198 RFX5P48382 616 aaPredicted RBP14.38□□□□□ -0.11
PRPF4-201ENST00000374198 KCNB1Q14721 858 aa14.38□□□□□ -0.11
PRPF4-201ENST00000374198 HAUS3Q68CZ6 603 aa14.38□□□□□ -0.11
PRPF4-201ENST00000374198 WDR59Q6PJI9 974 aa14.38□□□□□ -0.11
PRPF4-201ENST00000374198 CCDC125Q86Z20 511 aa14.38□□□□□ -0.11
PRPF4-201ENST00000374198 NOSTRINQ8IVI9 506 aa14.38□□□□□ -0.11
PRPF4-201ENST00000374198 NCOA7Q8NI08 942 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms