RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 GUCY1B3Q02153 619 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 TAF11Q15544 211 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 DDX41Q9UJV9 622 aaKnown RBP7.3□□□□□ -1.24
CHD6-203ENST00000373233 BICDL2A1A5D9 508 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 PNMA6AP0CW24 399 aaPredicted RBP7.3□□□□□ -1.24
CHD6-203ENST00000373233 PDE6BP35913 854 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 NBPF9Q3BBW0 867 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 SLC26A6Q9BXS9 759 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 NSFL1CQ9UNZ2 370 aaKnown RBP7.3□□□□□ -1.24
CHD6-203ENST00000373233 MYH13Q9UKX3 1938 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 ENO4A6NNW6 628 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 SEC31AO94979 1220 aaKnown RBP7.3□□□□□ -1.24
CHD6-203ENST00000373233 GCFC2P16383 781 aaKnown RBP7.3□□□□□ -1.24
CHD6-203ENST00000373233 LAMB3Q13751 1172 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 PPP1R21Q6ZMI0 780 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 CHD4Q14839 1912 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 MYH11P35749 1972 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 F8W031 263 aaPredicted RBP7.3□□□□□ -1.24
CHD6-203ENST00000373233 IFT88Q13099 833 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 CLEC4GQ6UXB4 293 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 ZNF589Q86UQ0 364 aaPredicted RBP7.3□□□□□ -1.24
CHD6-203ENST00000373233 ZNF444Q8N0Y2 327 aaPredicted RBP7.3□□□□□ -1.24
CHD6-203ENST00000373233 LINC00116Q8NCU8 138 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 EYA3Q99504 573 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 UBAP1Q9NZ09 502 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 FERP16591 822 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 TDRD12Q587J7 1177 aaKnown RBP7.3□□□□□ -1.24
CHD6-203ENST00000373233 TTLL11Q8NHH1 800 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 RFX7Q2KHR2 1363 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 ELF1P32519 619 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 TNNC1P63316 161 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 CEP70Q8NHQ1 597 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 KCNK9Q9NPC2 374 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 ARIH1Q9Y4X5 557 aaPredicted RBP7.3□□□□□ -1.24
CHD6-203ENST00000373233 COL18A1P39060 1754 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 MRC1P22897 1456 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 TPD52L2O43399 206 aaKnown RBP7.3□□□□□ -1.24
CHD6-203ENST00000373233 KIAA0753Q2KHM9 967 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 HOMER2Q9NSB8 354 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 ZNF609O15014 1411 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 CETN2P41208 172 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.29□□□□□ -1.24
CHD6-203ENST00000373233 ZMYM1Q5SVZ6 1142 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 GJC2Q5T442 439 aaPredicted RBP7.29□□□□□ -1.24
CHD6-203ENST00000373233 FBXO38Q6PIJ6 1188 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 SYNE4Q8N205 404 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 GDAP1L1Q96MZ0 367 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 Q9H521 79 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 RIMBP2O15034 1052 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 MAN1A2O60476 641 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 HNRNPCP07910 306 aaKnown RBP eCLIP7.29□□□□□ -1.244e-7■■■■□ 26
CHD6-203ENST00000373233 IFNKQ9P0W0 207 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 N4BP3O15049 544 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 KRT86O43790 486 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 PDE8BO95263 885 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 GYG1P46976 350 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 ACBD5Q5T8D3 534 aaPredicted RBP7.29□□□□□ -1.24
CHD6-203ENST00000373233 MRPS27Q92552 414 aaKnown RBP7.29□□□□□ -1.24
CHD6-203ENST00000373233 CARD6Q9BX69 1037 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 NARFQ9UHQ1 456 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 TSPY2A6NKD2 308 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 HLA-DOAP06340 250 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 SEPT2Q15019 361 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 TCERG1LQ5VWI1 586 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 KCNG4Q8TDN1 519 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 PRPF31Q8WWY3 499 aaKnown RBP7.29□□□□□ -1.24
CHD6-203ENST00000373233 IWS1Q96ST2 819 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 TM6SF1Q9BZW5 370 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 KAT14Q9H8E8 782 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 USP42Q9H9J4 1324 aaKnown RBP7.29□□□□□ -1.24
CHD6-203ENST00000373233 GOLGA8KD6RF30 607 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 MAP3K7CLP57077 242 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 FAM133BQ5BKY9 247 aaKnown RBP7.29□□□□□ -1.24
CHD6-203ENST00000373233 MFSD4BQ5TF39 518 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 BCL9O00512 1426 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 CARMIL3Q8ND23 1372 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 CHUKO15111 745 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 ATP1A2P50993 1020 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 CUL3Q13618 768 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 TMED8Q6PL24 325 aaPredicted RBP7.29□□□□□ -1.24
CHD6-203ENST00000373233 BCAS4Q8TDM0 211 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 NOP53Q9NZM5 478 aaKnown RBP7.29□□□□□ -1.24
CHD6-203ENST00000373233 TRIM66O15016 1216 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 IDEP14735 1019 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 RWDD2BP57060 319 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 ZNF711Q9Y462 761 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 ANKRD12Q6UB98 2062 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 EFCAB8A8MWE9 144 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 RPS6KA4O75676 772 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 ATP5DP30049 168 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 IFIT1BQ5T764 474 aaKnown RBP7.29□□□□□ -1.24
CHD6-203ENST00000373233 VSIG1Q86XK7 387 aa7.29□□□□□ -1.24
CHD6-203ENST00000373233 PHEXP78562 749 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 SKOR1P84550 965 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 C8orf74Q6P047 294 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 FLAD1Q8NFF5 587 aa7.28□□□□□ -1.24
CHD6-203ENST00000373233 AHDC1Q5TGY3 1603 aaPredicted RBP7.28□□□□□ -1.24
CHD6-203ENST00000373233 ECM2O94769 699 aaPredicted RBP7.28□□□□□ -1.24
CHD6-203ENST00000373233 FGFR1OPO95684 399 aaKnown RBP7.28□□□□□ -1.24
CHD6-203ENST00000373233 IARSP41252 1262 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms