RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 GEMIN8Q9NWZ8 242 aaKnown RBP13.42□□□□□ -0.26
SNX21-205ENST00000372547 MAGEC2Q9UBF1 373 aaPredicted RBP13.42□□□□□ -0.26
SNX21-205ENST00000372547 CAPN7Q9Y6W3 813 aa13.42□□□□□ -0.26
SNX21-205ENST00000372547 SLIT3O75094 1523 aa13.41□□□□□ -0.26
SNX21-205ENST00000372547 C1orf167Q5SNV9 1468 aa13.41□□□□□ -0.26
SNX21-205ENST00000372547 NDUFAB1O14561 156 aa13.41□□□□□ -0.26
SNX21-205ENST00000372547 HNRNPH1P31943 449 aaKnown RBP13.41□□□□□ -0.26
SNX21-205ENST00000372547 PPFIA1Q13136 1202 aa13.41□□□□□ -0.26
SNX21-205ENST00000372547 PAPD7Q5XG87 772 aaKnown RBP13.41□□□□□ -0.26
SNX21-205ENST00000372547 KIF6Q6ZMV9 814 aa13.41□□□□□ -0.26
SNX21-205ENST00000372547 SPATA5Q8NB90 893 aa13.41□□□□□ -0.26
SNX21-205ENST00000372547 FAM107BQ9H098 131 aa13.41□□□□□ -0.26
SNX21-205ENST00000372547 NHEJ1Q9H9Q4 299 aaPredicted RBP13.41□□□□□ -0.26
SNX21-205ENST00000372547 LRWD1Q9UFC0 647 aa13.41□□□□□ -0.26
SNX21-205ENST00000372547 TMEM94Q12767 1356 aa13.41□□□□□ -0.26
SNX21-205ENST00000372547 PDE8BO95263 885 aa13.41□□□□□ -0.26
SNX21-205ENST00000372547 CYLC1P35663 651 aaPredicted RBP13.41□□□□□ -0.26
SNX21-205ENST00000372547 STAT6P42226 847 aa13.41□□□□□ -0.26
SNX21-205ENST00000372547 CT47A1Q5JQC4 288 aaPredicted RBP13.41□□□□□ -0.26
SNX21-205ENST00000372547 ZNF658Q5TYW1 1059 aaPredicted RBP13.41□□□□□ -0.26
SNX21-205ENST00000372547 ARL8AQ96BM9 186 aa13.41□□□□□ -0.26
SNX21-205ENST00000372547 ISCA1Q9BUE6 129 aa13.41□□□□□ -0.26
SNX21-205ENST00000372547 FAM184BQ9ULE4 1060 aa13.41□□□□□ -0.26
SNX21-205ENST00000372547 CYP2D7A0A087X1C5 515 aa13.4□□□□□ -0.26
SNX21-205ENST00000372547 LRRC10BA6NIK2 292 aa13.4□□□□□ -0.26
SNX21-205ENST00000372547 ZPR1O75312 459 aa13.4□□□□□ -0.26
SNX21-205ENST00000372547 KIF5AQ12840 1032 aa13.4□□□□□ -0.26
SNX21-205ENST00000372547 PKN1Q16512 942 aa13.4□□□□□ -0.26
SNX21-205ENST00000372547 CCDC181Q5TID7 509 aa13.4□□□□□ -0.26
SNX21-205ENST00000372547 ANKRD13CQ8N6S4 541 aa13.4□□□□□ -0.26
SNX21-205ENST00000372547 RIC1Q4ADV7 1423 aa13.4□□□□□ -0.26
SNX21-205ENST00000372547 TARSL2A2RTX5 802 aaKnown RBP13.4□□□□□ -0.26
SNX21-205ENST00000372547 PLEKP08567 350 aaPredicted RBP13.4□□□□□ -0.26
SNX21-205ENST00000372547 NLRP5P59047 1200 aa13.4□□□□□ -0.26
SNX21-205ENST00000372547 RASGRF1Q13972 1273 aa13.4□□□□□ -0.26
SNX21-205ENST00000372547 IRF2BP1Q8IU81 584 aa13.4□□□□□ -0.26
SNX21-205ENST00000372547 SECISBP2LQ93073 1101 aaKnown RBP13.4□□□□□ -0.26
SNX21-205ENST00000372547 MLXIPQ9HAP2 919 aa13.4□□□□□ -0.26
SNX21-205ENST00000372547 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.4□□□□□ -0.26
SNX21-205ENST00000372547 LRP2BPQ9P2M1 347 aa13.4□□□□□ -0.26
SNX21-205ENST00000372547 WDR17Q8IZU2 1322 aa13.4□□□□□ -0.26
SNX21-205ENST00000372547 PP2D1A8MPX8 630 aa13.39□□□□□ -0.27
SNX21-205ENST00000372547 MYO1FO00160 1098 aa13.39□□□□□ -0.27
SNX21-205ENST00000372547 EIF3HO15372 352 aaKnown RBP eCLIP13.39□□□□□ -0.27
SNX21-205ENST00000372547 GTPBP6O43824 516 aaPredicted RBP13.39□□□□□ -0.27
SNX21-205ENST00000372547 MOCS3O95396 460 aa13.39□□□□□ -0.27
SNX21-205ENST00000372547 PCCAP05165 728 aaPredicted RBP13.39□□□□□ -0.27
SNX21-205ENST00000372547 NAP1L1P55209 391 aaKnown RBP13.39□□□□□ -0.27
SNX21-205ENST00000372547 TBC1D8BQ0IIM8 1120 aa13.39□□□□□ -0.27
SNX21-205ENST00000372547 HLFQ16534 295 aa13.39□□□□□ -0.27
SNX21-205ENST00000372547 ZBTB38Q8NAP3 1195 aaPredicted RBP13.39□□□□□ -0.27
SNX21-205ENST00000372547 EHBP1Q8NDI1 1231 aa13.39□□□□□ -0.27
SNX21-205ENST00000372547 PHF20Q9BVI0 1012 aa13.39□□□□□ -0.27
SNX21-205ENST00000372547 RNF26Q9BY78 433 aaPredicted RBP13.39□□□□□ -0.27
SNX21-205ENST00000372547 ABCF2Q9UG63 623 aa13.39□□□□□ -0.27
SNX21-205ENST00000372547 MYH7P12883 1935 aa13.39□□□□□ -0.27
SNX21-205ENST00000372547 ADAMTS3O15072 1205 aa13.39□□□□□ -0.27
SNX21-205ENST00000372547 KIAA0754O94854 1291 aa13.39□□□□□ -0.27
SNX21-205ENST00000372547 KRT14P02533 472 aa13.39□□□□□ -0.27
SNX21-205ENST00000372547 IFIT1BQ5T764 474 aaKnown RBP13.39□□□□□ -0.27
SNX21-205ENST00000372547 PDXDC2PQ6P474 469 aa13.39□□□□□ -0.27
SNX21-205ENST00000372547 NFRKBQ6P4R8 1299 aa13.39□□□□□ -0.27
SNX21-205ENST00000372547 TOM1L2Q6ZVM7 507 aa13.39□□□□□ -0.27
SNX21-205ENST00000372547 CCDC91Q7Z6B0 441 aa13.39□□□□□ -0.27
SNX21-205ENST00000372547 TMTC2Q8N394 836 aa13.39□□□□□ -0.27
SNX21-205ENST00000372547 TSEN2Q8NCE0 465 aaKnown RBP13.39□□□□□ -0.27
SNX21-205ENST00000372547 TRMT112Q9UI30 125 aaKnown RBP13.39□□□□□ -0.27
SNX21-205ENST00000372547 LGALS16A8MUM7 142 aa13.38□□□□□ -0.27
SNX21-205ENST00000372547 IRS4O14654 1257 aaPredicted RBP13.38□□□□□ -0.27
SNX21-205ENST00000372547 NCK2O43639 380 aa13.38□□□□□ -0.27
SNX21-205ENST00000372547 SHOX2O60902 331 aaPredicted RBP13.38□□□□□ -0.27
SNX21-205ENST00000372547 CPP00450 1065 aa13.38□□□□□ -0.27
SNX21-205ENST00000372547 SPA17Q15506 151 aa13.38□□□□□ -0.27
SNX21-205ENST00000372547 IL17AQ16552 155 aa13.38□□□□□ -0.27
SNX21-205ENST00000372547 SLC4A8Q2Y0W8 1093 aa13.38□□□□□ -0.27
SNX21-205ENST00000372547 RNF187Q5TA31 235 aaPredicted RBP13.38□□□□□ -0.27
SNX21-205ENST00000372547 IQCEQ6IPM2 695 aa13.38□□□□□ -0.27
SNX21-205ENST00000372547 TYW1BQ6NUM6 668 aa13.38□□□□□ -0.27
SNX21-205ENST00000372547 RPGRIP1Q96KN7 1286 aa13.38□□□□□ -0.27
SNX21-205ENST00000372547 CCDC42Q96M95 316 aa13.38□□□□□ -0.27
SNX21-205ENST00000372547 DNAJC7Q99615 494 aa13.38□□□□□ -0.27
SNX21-205ENST00000372547 CAPN11Q9UMQ6 739 aa13.38□□□□□ -0.27
SNX21-205ENST00000372547 MTMR7Q9Y216 660 aa13.38□□□□□ -0.27
SNX21-205ENST00000372547 CAPN6Q9Y6Q1 641 aa13.38□□□□□ -0.27
SNX21-205ENST00000372547 SOS2Q07890 1332 aaPredicted RBP13.38□□□□□ -0.27
SNX21-205ENST00000372547 DDX60Q8IY21 1712 aaKnown RBP13.38□□□□□ -0.27
SNX21-205ENST00000372547 H7C1D1 291 aa13.38□□□□□ -0.27
SNX21-205ENST00000372547 HSF2BPO75031 334 aa13.38□□□□□ -0.27
SNX21-205ENST00000372547 CSF1RP07333 972 aa13.38□□□□□ -0.27
SNX21-205ENST00000372547 VEGFAP15692 232 aaPredicted RBP13.38□□□□□ -0.27
SNX21-205ENST00000372547 MTIF2P46199 727 aaKnown RBP13.38□□□□□ -0.27
SNX21-205ENST00000372547 CATIPQ7Z7H3 387 aa13.38□□□□□ -0.27
SNX21-205ENST00000372547 SUGP1Q8IWZ8 645 aaKnown RBP13.38□□□□□ -0.27
SNX21-205ENST00000372547 OTUD6BQ8N6M0 293 aa13.38□□□□□ -0.27
SNX21-205ENST00000372547 STAG1Q8WVM7 1258 aa13.38□□□□□ -0.27
SNX21-205ENST00000372547 IFT81Q8WYA0 676 aa13.38□□□□□ -0.27
SNX21-205ENST00000372547 CENPHQ9H3R5 247 aa13.38□□□□□ -0.27
SNX21-205ENST00000372547 FBXO3Q9UK99 471 aa13.38□□□□□ -0.27
SNX21-205ENST00000372547 ESYT3A0FGR9 886 aa13.37□□□□□ -0.27
SNX21-205ENST00000372547 UQCRFS1P1P0C7P4 283 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms