RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 GPSM2P81274 684 aa11.24□□□□□ -0.61
KDM4A-201ENST00000372396 CCDC70Q6NSX1 233 aa11.24□□□□□ -0.61
KDM4A-201ENST00000372396 CEP112Q8N8E3 955 aa11.24□□□□□ -0.61
KDM4A-201ENST00000372396 RSRC1Q96IZ7 334 aaKnown RBP11.24□□□□□ -0.61
KDM4A-201ENST00000372396 CABS1Q96KC9 395 aa11.24□□□□□ -0.61
KDM4A-201ENST00000372396 EXOC1Q9NV70 894 aa11.24□□□□□ -0.61
KDM4A-201ENST00000372396 VWA3AA6NCI4 1184 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 SPDYE3A6NKU9 549 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 PHACTR2O75167 634 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 PLCD1P51178 756 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 DIXDC1Q155Q3 683 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 SGMS1Q86VZ5 419 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 USP54Q70EL1 1684 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 SCNN1DP51172 638 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 CYB5R4Q7L1T6 521 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 TMC6Q7Z403 805 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 LUZP1Q86V48 1076 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 DGKHQ86XP1 1220 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 KIAA0825Q8IV33 1275 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 NOC3LQ8WTT2 800 aaKnown RBP11.23□□□□□ -0.61
KDM4A-201ENST00000372396 MRFAP1L1Q96HT8 127 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 CTAGE1Q96RT6 745 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 FRMD3A2A2Y4 597 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 GOLGA6L10A6NI86 522 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 ADCY7P51828 1080 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 FKBP15Q5T1M5 1219 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 KRT79Q5XKE5 535 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 TANGO6Q9C0B7 1094 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 GOPCQ9HD26 462 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 DCP1AQ9NPI6 582 aaPredicted RBP11.23□□□□□ -0.61
KDM4A-201ENST00000372396 GPHNQ9NQX3 736 aaPredicted RBP11.23□□□□□ -0.61
KDM4A-201ENST00000372396 PCDHA7Q9UN72 937 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 SUGT1Q9Y2Z0 365 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 MROH7-TTC4A0A0A0MT08 1334 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 PRPF3O43395 683 aaKnown RBP11.23□□□□□ -0.61
KDM4A-201ENST00000372396 PPP6R2O75170 966 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 USP17L8P0C7I0 530 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 SLC1A4P43007 532 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 ZNF75DP51815 510 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 SLC39A14Q15043 492 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 MICALCLQ6ZW33 695 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 SMIM5Q71RC9 77 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 HDXQ7Z353 690 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 BLIDQ8IZY5 108 aa11.23□□□□□ -0.61
KDM4A-201ENST00000372396 BTBD18B2RXH4 712 aa11.22□□□□□ -0.61
KDM4A-201ENST00000372396 GCFC2P16383 781 aaKnown RBP11.22□□□□□ -0.61
KDM4A-201ENST00000372396 EIF6P56537 245 aaKnown RBP11.22□□□□□ -0.61
KDM4A-201ENST00000372396 NSUN4Q96CB9 384 aaKnown RBP11.22□□□□□ -0.61
KDM4A-201ENST00000372396 LY9Q9HBG7 655 aa11.22□□□□□ -0.61
KDM4A-201ENST00000372396 LUC7LQ9NQ29 371 aaKnown RBP11.22□□□□□ -0.61
KDM4A-201ENST00000372396 KDM3BQ7LBC6 1761 aa11.22□□□□□ -0.61
KDM4A-201ENST00000372396 PHLPP1O60346 1717 aa11.22□□□□□ -0.61
KDM4A-201ENST00000372396 KLRF2D3W0D1 207 aa11.22□□□□□ -0.61
KDM4A-201ENST00000372396 ZSCAN12O43309 604 aa11.22□□□□□ -0.61
KDM4A-201ENST00000372396 UBASH3AP57075 661 aa11.22□□□□□ -0.61
KDM4A-201ENST00000372396 TCP10Q12799 353 aa11.22□□□□□ -0.61
KDM4A-201ENST00000372396 MAP9Q49MG5 647 aa11.22□□□□□ -0.61
KDM4A-201ENST00000372396 CMTR1Q8N1G2 835 aaKnown RBP11.22□□□□□ -0.61
KDM4A-201ENST00000372396 CYP2D7A0A087X1C5 515 aa11.22□□□□□ -0.61
KDM4A-201ENST00000372396 GOLGA6L7A0A1B0GV03 622 aa11.22□□□□□ -0.61
KDM4A-201ENST00000372396 TRAPPC10P48553 1259 aa11.22□□□□□ -0.61
KDM4A-201ENST00000372396 MYL5Q02045 173 aa11.22□□□□□ -0.61
KDM4A-201ENST00000372396 LETM2Q2VYF4 491 aa11.22□□□□□ -0.61
KDM4A-201ENST00000372396 CCDC93Q567U6 631 aa11.22□□□□□ -0.61
KDM4A-201ENST00000372396 PODNQ7Z5L7 613 aa11.22□□□□□ -0.61
KDM4A-201ENST00000372396 HOOK2Q96ED9 719 aa11.22□□□□□ -0.61
KDM4A-201ENST00000372396 DHX36Q9H2U1 1008 aaKnown RBP11.22□□□□□ -0.61
KDM4A-201ENST00000372396 CAPN7Q9Y6W3 813 aa11.22□□□□□ -0.61
KDM4A-201ENST00000372396 ROBO1Q9Y6N7 1651 aa11.22□□□□□ -0.61
KDM4A-201ENST00000372396 POTEB2H3BUK9 544 aa11.21□□□□□ -0.61
KDM4A-201ENST00000372396 ORC4O43929 436 aa11.21□□□□□ -0.61
KDM4A-201ENST00000372396 NR1I2O75469 434 aa11.21□□□□□ -0.61
KDM4A-201ENST00000372396 MMP1P03956 469 aa11.21□□□□□ -0.61
KDM4A-201ENST00000372396 CHGBP05060 677 aa11.21□□□□□ -0.61
KDM4A-201ENST00000372396 IDEP14735 1019 aa11.21□□□□□ -0.61
KDM4A-201ENST00000372396 NLRP12P59046 1061 aa11.21□□□□□ -0.61
KDM4A-201ENST00000372396 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.21□□□□□ -0.61
KDM4A-201ENST00000372396 hCG_1642624A0A1W2PR95 340 aa11.21□□□□□ -0.61
KDM4A-201ENST00000372396 KLHL33A6NCF5 533 aa11.21□□□□□ -0.61
KDM4A-201ENST00000372396 PSMA7O14818 248 aa11.21□□□□□ -0.61
KDM4A-201ENST00000372396 PPFIA4O75335 1185 aa11.21□□□□□ -0.61
KDM4A-201ENST00000372396 PFKFB1P16118 471 aa11.21□□□□□ -0.61
KDM4A-201ENST00000372396 RNF187Q5TA31 235 aaPredicted RBP11.21□□□□□ -0.61
KDM4A-201ENST00000372396 MIEF2Q96C03 454 aa11.21□□□□□ -0.61
KDM4A-201ENST00000372396 GPR101Q96P66 508 aaPredicted RBP11.21□□□□□ -0.61
KDM4A-201ENST00000372396 CBX8Q9HC52 389 aa11.21□□□□□ -0.61
KDM4A-201ENST00000372396 DISP2A7MBM2 1401 aa11.21□□□□□ -0.62
KDM4A-201ENST00000372396 PDCD2Q16342 344 aaPredicted RBP11.21□□□□□ -0.62
KDM4A-201ENST00000372396 ASPRV1Q53RT3 343 aa11.21□□□□□ -0.62
KDM4A-201ENST00000372396 SH3RF3Q8TEJ3 882 aaPredicted RBP11.21□□□□□ -0.62
KDM4A-201ENST00000372396 CLIC4Q9Y696 253 aa11.21□□□□□ -0.62
KDM4A-201ENST00000372396 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.21□□□□□ -0.62
KDM4A-201ENST00000372396 POLR2DO15514 142 aaKnown RBP11.21□□□□□ -0.62
KDM4A-201ENST00000372396 PPP1R12BO60237 982 aaPredicted RBP11.21□□□□□ -0.62
KDM4A-201ENST00000372396 PPP1R2P41236 205 aa11.21□□□□□ -0.62
KDM4A-201ENST00000372396 RTKN2Q8IZC4 609 aa11.21□□□□□ -0.62
KDM4A-201ENST00000372396 REXO1Q8N1G1 1221 aaKnown RBP11.21□□□□□ -0.62
KDM4A-201ENST00000372396 LINC00301Q8NCQ3 95 aa11.21□□□□□ -0.62
KDM4A-201ENST00000372396 IL17RAQ96F46 866 aa11.21□□□□□ -0.62
KDM4A-201ENST00000372396 CARD6Q9BX69 1037 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms