RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 CAP2P40123 477 aa20.69■□□□□ 0.9
CD40-202ENST00000372285 SLC1A4P43007 532 aa20.69■□□□□ 0.9
CD40-202ENST00000372285 KLRC3Q07444 240 aa20.69■□□□□ 0.9
CD40-202ENST00000372285 TTBK2Q6IQ55 1244 aa20.69■□□□□ 0.9
CD40-202ENST00000372285 CCDC73Q6ZRK6 1079 aa20.69■□□□□ 0.9
CD40-202ENST00000372285 KCTD1Q719H9 257 aa20.69■□□□□ 0.9
CD40-202ENST00000372285 MIGA2Q7L4E1 593 aa20.69■□□□□ 0.9
CD40-202ENST00000372285 FSIP1Q8NA03 581 aa20.69■□□□□ 0.9
CD40-202ENST00000372285 ENGASEQ8NFI3 743 aa20.69■□□□□ 0.9
CD40-202ENST00000372285 CLSTN2Q9H4D0 955 aa20.69■□□□□ 0.9
CD40-202ENST00000372285 ARHGEF10LQ9HCE6 1279 aa20.69■□□□□ 0.9
CD40-202ENST00000372285 CEP131Q9UPN4 1083 aa20.69■□□□□ 0.9
CD40-202ENST00000372285 PCDHB6Q9Y5E3 794 aa20.69■□□□□ 0.9
CD40-202ENST00000372285 TRIM75PA6NK02 468 aa20.68■□□□□ 0.9
CD40-202ENST00000372285 ADAMTS3O15072 1205 aa20.68■□□□□ 0.9
CD40-202ENST00000372285 TRAPPC10P48553 1259 aa20.68■□□□□ 0.9
CD40-202ENST00000372285 NAPAP54920 295 aa20.68■□□□□ 0.9
CD40-202ENST00000372285 FAM160A1Q05DH4 1040 aa20.68■□□□□ 0.9
CD40-202ENST00000372285 NUP62CLQ9H1M0 184 aa20.68■□□□□ 0.9
CD40-202ENST00000372285 PNMA6FA0A0J9YX94 578 aa20.67■□□□□ 0.9
CD40-202ENST00000372285 A0A1W2PRG0 241 aa20.67■□□□□ 0.9
CD40-202ENST00000372285 ESYT2A0FGR8 921 aa20.67■□□□□ 0.9
CD40-202ENST00000372285 NDUFB10O96000 172 aa20.67■□□□□ 0.9
CD40-202ENST00000372285 YBX3P16989 372 aaKnown RBP eCLIP20.67■□□□□ 0.9
CD40-202ENST00000372285 CMA1P23946 247 aa20.67■□□□□ 0.9
CD40-202ENST00000372285 MARCKSP29966 332 aaPredicted RBP20.67■□□□□ 0.9
CD40-202ENST00000372285 MRE11P49959 708 aa20.67■□□□□ 0.9
CD40-202ENST00000372285 NOM1Q5C9Z4 860 aaKnown RBP20.67■□□□□ 0.9
CD40-202ENST00000372285 TMX2Q9Y320 296 aa20.67■□□□□ 0.9
CD40-202ENST00000372285 PHF20L1A8MW92 1017 aa20.67■□□□□ 0.9
CD40-202ENST00000372285 CUTAO60888 179 aa20.67■□□□□ 0.9
CD40-202ENST00000372285 SNW1Q13573 536 aaKnown RBP20.67■□□□□ 0.9
CD40-202ENST00000372285 APOBEC3FQ8IUX4 373 aaKnown RBP20.67■□□□□ 0.9
CD40-202ENST00000372285 DEFB129Q9H1M3 183 aa20.67■□□□□ 0.9
CD40-202ENST00000372285 GRPEL1Q9HAV7 217 aa20.67■□□□□ 0.9
CD40-202ENST00000372285 C6orf50Q9HD87 102 aa20.67■□□□□ 0.9
CD40-202ENST00000372285 BMP15O95972 392 aa20.66■□□□□ 0.9
CD40-202ENST00000372285 PPP1R18Q6NYC8 613 aa20.66■□□□□ 0.9
CD40-202ENST00000372285 PIK3AP1Q6ZUJ8 805 aa20.66■□□□□ 0.9
CD40-202ENST00000372285 PCDHA6Q9UN73 950 aa20.66■□□□□ 0.9
CD40-202ENST00000372285 SCAF8Q9UPN6 1271 aaKnown RBP20.66■□□□□ 0.9
CD40-202ENST00000372285 PCDHA8Q9Y5H6 950 aa20.66■□□□□ 0.9
CD40-202ENST00000372285 SMCO2A6NFE2 343 aa20.65■□□□□ 0.9
CD40-202ENST00000372285 ASNSP08243 561 aa20.65■□□□□ 0.9
CD40-202ENST00000372285 GNA11P29992 359 aa20.65■□□□□ 0.9
CD40-202ENST00000372285 SLC16A2P36021 539 aa20.65■□□□□ 0.9
CD40-202ENST00000372285 RBM43Q6ZSC3 357 aaKnown RBP20.65■□□□□ 0.9
CD40-202ENST00000372285 FMR1NBQ8N0W7 255 aaPredicted RBP20.65■□□□□ 0.9
CD40-202ENST00000372285 KRI1Q8N9T8 703 aaKnown RBP20.65■□□□□ 0.9
CD40-202ENST00000372285 TRPM4Q8TD43 1214 aa20.65■□□□□ 0.9
CD40-202ENST00000372285 GINM1Q9NU53 330 aa20.65■□□□□ 0.9
CD40-202ENST00000372285 RNF181Q9P0P0 153 aa20.65■□□□□ 0.9
CD40-202ENST00000372285 POLR2AP24928 1970 aaKnown RBP20.65■□□□□ 0.9
CD40-202ENST00000372285 FAM237AA0A1B0GTK4 181 aa20.64■□□□□ 0.9
CD40-202ENST00000372285 USP17L10C9JJH3 530 aa20.64■□□□□ 0.9
CD40-202ENST00000372285 ZBTB5O15062 677 aa20.64■□□□□ 0.9
CD40-202ENST00000372285 RAD21O60216 631 aa20.64■□□□□ 0.9
CD40-202ENST00000372285 PTPREP23469 700 aa20.64■□□□□ 0.9
CD40-202ENST00000372285 MAP3K11Q16584 847 aa20.64■□□□□ 0.9
CD40-202ENST00000372285 TTC38Q5R3I4 469 aa20.64■□□□□ 0.9
CD40-202ENST00000372285 BTNL9Q6UXG8 535 aa20.64■□□□□ 0.9
CD40-202ENST00000372285 ACER1Q8TDN7 264 aa20.64■□□□□ 0.9
CD40-202ENST00000372285 TNMDQ9H2S6 317 aa20.64■□□□□ 0.9
CD40-202ENST00000372285 TSPY26PQ9H489 355 aa20.64■□□□□ 0.9
CD40-202ENST00000372285 FBXO2Q9UK22 296 aaPredicted RBP20.64■□□□□ 0.9
CD40-202ENST00000372285 A0A1B0GVL5 298 aa20.64■□□□□ 0.89
CD40-202ENST00000372285 BMP3P12645 472 aa20.64■□□□□ 0.89
CD40-202ENST00000372285 ATP2B1P20020 1258 aa20.64■□□□□ 0.89
CD40-202ENST00000372285 EPS15P42566 896 aa20.64■□□□□ 0.89
CD40-202ENST00000372285 GOPCQ9HD26 462 aa20.64■□□□□ 0.89
CD40-202ENST00000372285 CCDC194A0A1B0GVG4 234 aa20.63■□□□□ 0.89
CD40-202ENST00000372285 PPP1R11O60927 126 aaPredicted RBP20.63■□□□□ 0.89
CD40-202ENST00000372285 ECE1P42892 770 aa20.63■□□□□ 0.89
CD40-202ENST00000372285 NDUFA8P51970 172 aa20.63■□□□□ 0.89
CD40-202ENST00000372285 ANGEL2Q5VTE6 544 aaKnown RBP20.63■□□□□ 0.89
CD40-202ENST00000372285 RESP18Q5W5W9 173 aa20.63■□□□□ 0.89
CD40-202ENST00000372285 COA7Q96BR5 231 aa20.63■□□□□ 0.89
CD40-202ENST00000372285 HOOK2Q96ED9 719 aa20.63■□□□□ 0.89
CD40-202ENST00000372285 FUCA2Q9BTY2 467 aa20.63■□□□□ 0.89
CD40-202ENST00000372285 SH2D4AQ9H788 454 aa20.63■□□□□ 0.89
CD40-202ENST00000372285 SRPRBQ9Y5M8 271 aaKnown RBP20.63■□□□□ 0.89
CD40-202ENST00000372285 DOCK1Q14185 1865 aa20.63■□□□□ 0.89
CD40-202ENST00000372285 WNT7AO00755 349 aa20.62■□□□□ 0.89
CD40-202ENST00000372285 CTAGE5O15320 804 aa20.62■□□□□ 0.89
CD40-202ENST00000372285 KINO60870 393 aaKnown RBP20.62■□□□□ 0.89
CD40-202ENST00000372285 XRCC6P12956 609 aaKnown RBP eCLIP20.62■□□□□ 0.89
CD40-202ENST00000372285 CAMK4Q16566 473 aa20.62■□□□□ 0.89
CD40-202ENST00000372285 SHC4Q6S5L8 630 aa20.62■□□□□ 0.89
CD40-202ENST00000372285 KRT25Q7Z3Z0 450 aa20.62■□□□□ 0.89
CD40-202ENST00000372285 ZNF579Q8NAF0 562 aaKnown RBP20.62■□□□□ 0.89
CD40-202ENST00000372285 RASGRP4Q8TDF6 673 aa20.62■□□□□ 0.89
CD40-202ENST00000372285 NUP88Q99567 741 aaPredicted RBP20.62■□□□□ 0.89
CD40-202ENST00000372285 CTNND1O60716 968 aaKnown RBP20.61■□□□□ 0.89
CD40-202ENST00000372285 DDNO94850 711 aaPredicted RBP20.61■□□□□ 0.89
CD40-202ENST00000372285 PFKFB1P16118 471 aa20.61■□□□□ 0.89
CD40-202ENST00000372285 HIRAP54198 1017 aaPredicted RBP20.61■□□□□ 0.89
CD40-202ENST00000372285 NBPF12Q5TAG4 269 aaPredicted RBP20.61■□□□□ 0.89
CD40-202ENST00000372285 CLIC6Q96NY7 704 aa20.61■□□□□ 0.89
CD40-202ENST00000372285 RBSNQ9H1K0 784 aa20.61■□□□□ 0.89
CD40-202ENST00000372285 HPSEQ9Y251 543 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms