RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 FAM200AQ8TCP9 573 aa14.87□□□□□ -0.03
LDB3-203ENST00000372056 TRIM44Q96DX7 344 aaPredicted RBP14.87□□□□□ -0.03
LDB3-203ENST00000372056 TEPSINQ96N21 525 aa14.87□□□□□ -0.03
LDB3-203ENST00000372056 BRMS1Q9HCU9 246 aa14.87□□□□□ -0.03
LDB3-203ENST00000372056 GOPCQ9HD26 462 aa14.87□□□□□ -0.03
LDB3-203ENST00000372056 MAD2L2Q9UI95 211 aa14.87□□□□□ -0.03
LDB3-203ENST00000372056 KRT2P35908 639 aa14.86□□□□□ -0.03
LDB3-203ENST00000372056 NPY5RQ15761 445 aa14.86□□□□□ -0.03
LDB3-203ENST00000372056 PFKFB3Q16875 520 aaPredicted RBP14.86□□□□□ -0.03
LDB3-203ENST00000372056 SASS6Q6UVJ0 657 aa14.86□□□□□ -0.03
LDB3-203ENST00000372056 GMCL1Q96IK5 515 aa14.86□□□□□ -0.03
LDB3-203ENST00000372056 NF2P35240 595 aa14.86□□□□□ -0.03
LDB3-203ENST00000372056 STAG2Q8N3U4 1231 aa14.86□□□□□ -0.03
LDB3-203ENST00000372056 GGA3Q9NZ52 723 aa14.86□□□□□ -0.03
LDB3-203ENST00000372056 ZNF112Q9UJU3 913 aa14.86□□□□□ -0.03
LDB3-203ENST00000372056 FAM237AA0A1B0GTK4 181 aa14.85□□□□□ -0.03
LDB3-203ENST00000372056 KLRF2D3W0D1 207 aa14.85□□□□□ -0.03
LDB3-203ENST00000372056 CUTAO60888 179 aa14.85□□□□□ -0.03
LDB3-203ENST00000372056 GH2P01242 217 aa14.85□□□□□ -0.03
LDB3-203ENST00000372056 PDHBP11177 359 aa14.85□□□□□ -0.03
LDB3-203ENST00000372056 EEF2P13639 858 aaKnown RBP14.85□□□□□ -0.03
LDB3-203ENST00000372056 PFKFB1P16118 471 aa14.85□□□□□ -0.03
LDB3-203ENST00000372056 CALML3P27482 149 aa14.85□□□□□ -0.03
LDB3-203ENST00000372056 EPHX2P34913 555 aa14.85□□□□□ -0.03
LDB3-203ENST00000372056 ANO6Q4KMQ2 910 aa14.85□□□□□ -0.03
LDB3-203ENST00000372056 TNFRSF25Q93038 417 aa14.85□□□□□ -0.03
LDB3-203ENST00000372056 AS3MTQ9HBK9 375 aa14.85□□□□□ -0.03
LDB3-203ENST00000372056 SEC63Q9UGP8 760 aaKnown RBP14.85□□□□□ -0.03
LDB3-203ENST00000372056 ZBTB21Q9ULJ3 1066 aa14.85□□□□□ -0.03
LDB3-203ENST00000372056 SHTN1A0MZ66 631 aa14.84□□□□□ -0.03
LDB3-203ENST00000372056 UNCXA6NJT0 531 aa14.84□□□□□ -0.03
LDB3-203ENST00000372056 EGFRP00533 1210 aa14.84□□□□□ -0.03
LDB3-203ENST00000372056 SEPT2Q15019 361 aa14.84□□□□□ -0.03
LDB3-203ENST00000372056 SLC35G1Q2M3R5 365 aa14.84□□□□□ -0.03
LDB3-203ENST00000372056 RESP18Q5W5W9 173 aa14.84□□□□□ -0.03
LDB3-203ENST00000372056 SHC4Q6S5L8 630 aa14.84□□□□□ -0.03
LDB3-203ENST00000372056 CCDC148Q8NFR7 591 aa14.84□□□□□ -0.03
LDB3-203ENST00000372056 TRPM4Q8TD43 1214 aa14.84□□□□□ -0.03
LDB3-203ENST00000372056 RRP36Q96EU6 259 aaKnown RBP14.84□□□□□ -0.03
LDB3-203ENST00000372056 HPSEQ9Y251 543 aa14.84□□□□□ -0.03
LDB3-203ENST00000372056 TMX2Q9Y320 296 aa14.84□□□□□ -0.03
LDB3-203ENST00000372056 PHF20L1A8MW92 1017 aa14.84□□□□□ -0.03
LDB3-203ENST00000372056 PPP1R12BO60237 982 aaPredicted RBP14.84□□□□□ -0.03
LDB3-203ENST00000372056 PLA2G6O60733 806 aa14.84□□□□□ -0.03
LDB3-203ENST00000372056 ZNF202O95125 648 aa14.84□□□□□ -0.03
LDB3-203ENST00000372056 CAVIN2O95810 425 aa14.84□□□□□ -0.03
LDB3-203ENST00000372056 VEGFAP15692 232 aaPredicted RBP14.84□□□□□ -0.03
LDB3-203ENST00000372056 ZNF543Q08ER8 600 aa14.84□□□□□ -0.03
LDB3-203ENST00000372056 KRI1Q8N9T8 703 aaKnown RBP14.84□□□□□ -0.03
LDB3-203ENST00000372056 SDF4Q9BRK5 362 aa14.84□□□□□ -0.03
LDB3-203ENST00000372056 GLT8D2Q9H1C3 349 aa14.84□□□□□ -0.03
LDB3-203ENST00000372056 RIOX1Q9H6W3 641 aa14.84□□□□□ -0.03
LDB3-203ENST00000372056 USP25Q9UHP3 1055 aa14.84□□□□□ -0.03
LDB3-203ENST00000372056 PNMA2Q9UL42 364 aa14.84□□□□□ -0.03
LDB3-203ENST00000372056 PCDHB6Q9Y5E3 794 aa14.84□□□□□ -0.03
LDB3-203ENST00000372056 MORC2Q9Y6X9 1032 aaPredicted RBP14.84□□□□□ -0.03
LDB3-203ENST00000372056 BAZ2BQ9UIF8 2168 aaKnown RBP14.84□□□□□ -0.03
LDB3-203ENST00000372056 FAM205CA6NFA0 338 aa14.83□□□□□ -0.04
LDB3-203ENST00000372056 SLC1A4P43007 532 aa14.83□□□□□ -0.04
LDB3-203ENST00000372056 HIRAP54198 1017 aaPredicted RBP14.83□□□□□ -0.04
LDB3-203ENST00000372056 USP14P54578 494 aa14.83□□□□□ -0.04
LDB3-203ENST00000372056 ATP2B2Q01814 1243 aa14.83□□□□□ -0.04
LDB3-203ENST00000372056 EARS2Q5JPH6 523 aaKnown RBP14.83□□□□□ -0.04
LDB3-203ENST00000372056 SLFN13Q68D06 897 aa14.83□□□□□ -0.04
LDB3-203ENST00000372056 PIBF1Q8WXW3 757 aa14.83□□□□□ -0.04
LDB3-203ENST00000372056 LPAR1Q92633 364 aa14.83□□□□□ -0.04
LDB3-203ENST00000372056 CLIC6Q96NY7 704 aa14.83□□□□□ -0.04
LDB3-203ENST00000372056 FBXO2Q9UK22 296 aaPredicted RBP14.83□□□□□ -0.04
LDB3-203ENST00000372056 CEP131Q9UPN4 1083 aa14.83□□□□□ -0.04
LDB3-203ENST00000372056 GOLGB1Q14789 3259 aaKnown RBP14.83□□□□□ -0.04
LDB3-203ENST00000372056 WDR90Q96KV7 1748 aa14.83□□□□□ -0.04
LDB3-203ENST00000372056 MYH4Q9Y623 1939 aa14.83□□□□□ -0.04
LDB3-203ENST00000372056 TRIM75PA6NK02 468 aa14.82□□□□□ -0.04
LDB3-203ENST00000372056 USP17L5A8MUK1 530 aa14.82□□□□□ -0.04
LDB3-203ENST00000372056 F5H6K3 240 aa14.82□□□□□ -0.04
LDB3-203ENST00000372056 CYTH3O43739 400 aa14.82□□□□□ -0.04
LDB3-203ENST00000372056 PTPREP23469 700 aa14.82□□□□□ -0.04
LDB3-203ENST00000372056 KLRC3Q07444 240 aa14.82□□□□□ -0.04
LDB3-203ENST00000372056 STX1AQ16623 288 aa14.82□□□□□ -0.04
LDB3-203ENST00000372056 HS1BP3Q53T59 392 aa14.82□□□□□ -0.04
LDB3-203ENST00000372056 CBX8Q9HC52 389 aa14.82□□□□□ -0.04
LDB3-203ENST00000372056 PICK1Q9NRD5 415 aa14.82□□□□□ -0.04
LDB3-203ENST00000372056 GDF11O95390 407 aa14.82□□□□□ -0.04
LDB3-203ENST00000372056 SYKP43405 635 aa14.82□□□□□ -0.04
LDB3-203ENST00000372056 NLRP5P59047 1200 aa14.82□□□□□ -0.04
LDB3-203ENST00000372056 NOL9Q5SY16 702 aaKnown RBP14.82□□□□□ -0.04
LDB3-203ENST00000372056 MCTP2Q6DN12 878 aa14.82□□□□□ -0.04
LDB3-203ENST00000372056 MIGA2Q7L4E1 593 aa14.82□□□□□ -0.04
LDB3-203ENST00000372056 CHURC1Q8WUH1 139 aa14.82□□□□□ -0.04
LDB3-203ENST00000372056 TIGD1Q96MW7 591 aa14.82□□□□□ -0.04
LDB3-203ENST00000372056 DNAJC25Q9H1X3 360 aa14.82□□□□□ -0.04
LDB3-203ENST00000372056 FAM196BA6NMK8 535 aa14.81□□□□□ -0.04
LDB3-203ENST00000372056 ZNF165P49910 485 aa14.81□□□□□ -0.04
LDB3-203ENST00000372056 NBPF12Q5TAG4 269 aaPredicted RBP14.81□□□□□ -0.04
LDB3-203ENST00000372056 PPP1R18Q6NYC8 613 aa14.81□□□□□ -0.04
LDB3-203ENST00000372056 RASGRP2Q7LDG7 609 aa14.81□□□□□ -0.04
LDB3-203ENST00000372056 LUZP1Q86V48 1076 aa14.81□□□□□ -0.04
LDB3-203ENST00000372056 FAM160B2Q86V87 743 aa14.81□□□□□ -0.04
LDB3-203ENST00000372056 SCYL3Q8IZE3 742 aa14.81□□□□□ -0.04
LDB3-203ENST00000372056 GPKOWQ92917 476 aaPredicted RBP eCLIP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms