RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 DAXXQ9UER7 740 aaPredicted RBP18.6■□□□□ 0.57
PFDN4-201ENST00000371419 CYP46A1Q9Y6A2 500 aa18.6■□□□□ 0.57
PFDN4-201ENST00000371419 CASP8AP2Q9UKL3 1982 aa18.6■□□□□ 0.57
PFDN4-201ENST00000371419 PEX10O60683 326 aa18.59■□□□□ 0.57
PFDN4-201ENST00000371419 PARP1P09874 1014 aaKnown RBP18.59■□□□□ 0.57
PFDN4-201ENST00000371419 TROAPQ12815 778 aa18.59■□□□□ 0.57
PFDN4-201ENST00000371419 TTBK2Q6IQ55 1244 aa18.59■□□□□ 0.57
PFDN4-201ENST00000371419 BTNL9Q6UXG8 535 aa18.59■□□□□ 0.57
PFDN4-201ENST00000371419 ZNF654Q8IZM8 581 aa18.59■□□□□ 0.57
PFDN4-201ENST00000371419 CD99L2Q8TCZ2 262 aa18.59■□□□□ 0.57
PFDN4-201ENST00000371419 IL17RAQ96F46 866 aa18.59■□□□□ 0.57
PFDN4-201ENST00000371419 TBC1D32Q96NH3 1257 aa18.59■□□□□ 0.57
PFDN4-201ENST00000371419 ZBED4O75132 1171 aa18.58■□□□□ 0.57
PFDN4-201ENST00000371419 DDAH1O94760 285 aa18.58■□□□□ 0.57
PFDN4-201ENST00000371419 GOLGA8HP0CJ92 632 aa18.58■□□□□ 0.57
PFDN4-201ENST00000371419 FDX1P10109 184 aa18.58■□□□□ 0.57
PFDN4-201ENST00000371419 CCNA1P78396 465 aa18.58■□□□□ 0.57
PFDN4-201ENST00000371419 ARHGEF6Q15052 776 aa18.58■□□□□ 0.57
PFDN4-201ENST00000371419 Q3C1V9 767 aa18.58■□□□□ 0.57
PFDN4-201ENST00000371419 Q6ZUG5 572 aa18.58■□□□□ 0.57
PFDN4-201ENST00000371419 PRR12Q9ULL5 1215 aa18.58■□□□□ 0.57
PFDN4-201ENST00000371419 CTDP1Q9Y5B0 961 aaPredicted RBP18.58■□□□□ 0.57
PFDN4-201ENST00000371419 SLC12A7Q9Y666 1083 aa18.58■□□□□ 0.57
PFDN4-201ENST00000371419 A0A0G2JMZ2 1700 aa18.58■□□□□ 0.56
PFDN4-201ENST00000371419 SLC16A2P36021 539 aa18.58■□□□□ 0.56
PFDN4-201ENST00000371419 GRM4Q14833 912 aa18.58■□□□□ 0.56
PFDN4-201ENST00000371419 TMEM132BQ14DG7 1078 aa18.58■□□□□ 0.56
PFDN4-201ENST00000371419 SYDE2Q5VT97 1194 aa18.58■□□□□ 0.56
PFDN4-201ENST00000371419 FBXL16Q8N461 479 aa18.58■□□□□ 0.56
PFDN4-201ENST00000371419 REPS2Q8NFH8 660 aa18.58■□□□□ 0.56
PFDN4-201ENST00000371419 NUP133Q8WUM0 1156 aa18.58■□□□□ 0.56
PFDN4-201ENST00000371419 MAP3K14Q99558 947 aa18.58■□□□□ 0.56
PFDN4-201ENST00000371419 C22orf23Q9BZE7 217 aa18.58■□□□□ 0.56
PFDN4-201ENST00000371419 UPF3BQ9BZI7 483 aaKnown RBP18.58■□□□□ 0.56
PFDN4-201ENST00000371419 SPATC1LQ9H0A9 340 aa18.58■□□□□ 0.56
PFDN4-201ENST00000371419 SLC38A10Q9HBR0 1119 aa18.58■□□□□ 0.56
PFDN4-201ENST00000371419 CALM1P0DP23 149 aa18.57■□□□□ 0.56
PFDN4-201ENST00000371419 CALM2P0DP24 149 aa18.57■□□□□ 0.56
PFDN4-201ENST00000371419 CALM3P0DP25 149 aa18.57■□□□□ 0.56
PFDN4-201ENST00000371419 PSMC4P43686 418 aa18.57■□□□□ 0.56
PFDN4-201ENST00000371419 FCGRTP55899 365 aa18.57■□□□□ 0.56
PFDN4-201ENST00000371419 PLS1Q14651 629 aa18.57■□□□□ 0.56
PFDN4-201ENST00000371419 SYNE3Q6ZMZ3 975 aa18.57■□□□□ 0.56
PFDN4-201ENST00000371419 ARHGAP39Q9C0H5 1083 aa18.57■□□□□ 0.56
PFDN4-201ENST00000371419 MAD2L2Q9UI95 211 aa18.57■□□□□ 0.56
PFDN4-201ENST00000371419 PALM3A6NDB9 673 aaPredicted RBP18.56■□□□□ 0.56
PFDN4-201ENST00000371419 ECM2O94769 699 aaPredicted RBP18.56■□□□□ 0.56
PFDN4-201ENST00000371419 FMNL1O95466 1100 aaPredicted RBP18.56■□□□□ 0.56
PFDN4-201ENST00000371419 CCAR1Q8IX12 1150 aaKnown RBP18.56■□□□□ 0.56
PFDN4-201ENST00000371419 STAG2Q8N3U4 1231 aa18.56■□□□□ 0.56
PFDN4-201ENST00000371419 CTCFLQ8NI51 663 aaPredicted RBP18.56■□□□□ 0.56
PFDN4-201ENST00000371419 BRF1Q92994 677 aa18.56■□□□□ 0.56
PFDN4-201ENST00000371419 TRIM47Q96LD4 638 aa18.56■□□□□ 0.56
PFDN4-201ENST00000371419 MYL10Q9BUA6 226 aa18.56■□□□□ 0.56
PFDN4-201ENST00000371419 AGXT2Q9BYV1 514 aa18.56■□□□□ 0.56
PFDN4-201ENST00000371419 UBA5Q9GZZ9 404 aa18.56■□□□□ 0.56
PFDN4-201ENST00000371419 EFCC1Q9HA90 598 aa18.56■□□□□ 0.56
PFDN4-201ENST00000371419 ZNF214Q9UL59 606 aaPredicted RBP18.56■□□□□ 0.56
PFDN4-201ENST00000371419 KLRF2D3W0D1 207 aa18.55■□□□□ 0.56
PFDN4-201ENST00000371419 ATP2A1O14983 1001 aa18.55■□□□□ 0.56
PFDN4-201ENST00000371419 CTGFP29279 349 aa18.55■□□□□ 0.56
PFDN4-201ENST00000371419 MAPK4P31152 587 aa18.55■□□□□ 0.56
PFDN4-201ENST00000371419 KIF5BP33176 963 aa18.55■□□□□ 0.56
PFDN4-201ENST00000371419 STAT3P40763 770 aa18.55■□□□□ 0.56
PFDN4-201ENST00000371419 OAZ1P54368 228 aa18.55■□□□□ 0.56
PFDN4-201ENST00000371419 CAP1Q01518 475 aa18.55■□□□□ 0.56
PFDN4-201ENST00000371419 APOA5Q6Q788 366 aa18.55■□□□□ 0.56
PFDN4-201ENST00000371419 MOV10L1Q9BXT6 1211 aaKnown RBP18.55■□□□□ 0.56
PFDN4-201ENST00000371419 TEX13BQ9BXU2 312 aa18.55■□□□□ 0.56
PFDN4-201ENST00000371419 PORCNQ9H237 461 aa18.55■□□□□ 0.56
PFDN4-201ENST00000371419 PDRG1Q9NUG6 133 aa18.55■□□□□ 0.56
PFDN4-201ENST00000371419 BRPF3Q9ULD4 1205 aa18.55■□□□□ 0.56
PFDN4-201ENST00000371419 KLF18A0A0U1RQI7 1052 aa18.54■□□□□ 0.56
PFDN4-201ENST00000371419 GNRH1P01148 92 aa18.54■□□□□ 0.56
PFDN4-201ENST00000371419 RBM25P49756 843 aaKnown RBP18.54■□□□□ 0.56
PFDN4-201ENST00000371419 BECN1Q14457 450 aa18.54■□□□□ 0.56
PFDN4-201ENST00000371419 CTU1Q7Z7A3 348 aaKnown RBP18.54■□□□□ 0.56
PFDN4-201ENST00000371419 MICU3Q86XE3 530 aa18.54■□□□□ 0.56
PFDN4-201ENST00000371419 RIOX2Q8IUF8 465 aa18.54■□□□□ 0.56
PFDN4-201ENST00000371419 CPXCR1Q8N123 301 aa18.54■□□□□ 0.56
PFDN4-201ENST00000371419 SHCBP1Q8NEM2 672 aa18.54■□□□□ 0.56
PFDN4-201ENST00000371419 RANBP17Q9H2T7 1088 aaKnown RBP18.54■□□□□ 0.56
PFDN4-201ENST00000371419 CPVLQ9H3G5 476 aa18.54■□□□□ 0.56
PFDN4-201ENST00000371419 RAVER2Q9HCJ3 691 aaKnown RBP18.54■□□□□ 0.56
PFDN4-201ENST00000371419 COL11A1P12107 1806 aaPredicted RBP18.54■□□□□ 0.56
PFDN4-201ENST00000371419 TNPO2O14787 897 aaKnown RBP18.53■□□□□ 0.56
PFDN4-201ENST00000371419 ZBTB43O43298 467 aa18.53■□□□□ 0.56
PFDN4-201ENST00000371419 SLC25A27O95847 323 aa18.53■□□□□ 0.56
PFDN4-201ENST00000371419 RXRAP19793 462 aa18.53■□□□□ 0.56
PFDN4-201ENST00000371419 COPB2P35606 906 aa18.53■□□□□ 0.56
PFDN4-201ENST00000371419 SNAP25P60880 206 aa18.53■□□□□ 0.56
PFDN4-201ENST00000371419 APOBRQ0VD83 1088 aa18.53■□□□□ 0.56
PFDN4-201ENST00000371419 OTOP1Q7RTM1 612 aa18.53■□□□□ 0.56
PFDN4-201ENST00000371419 ADGRF4Q8IZF3 695 aa18.53■□□□□ 0.56
PFDN4-201ENST00000371419 COA7Q96BR5 231 aa18.53■□□□□ 0.56
PFDN4-201ENST00000371419 MROH8Q9H579 483 aa18.53■□□□□ 0.56
PFDN4-201ENST00000371419 CWC22Q9HCG8 908 aaKnown RBP18.53■□□□□ 0.56
PFDN4-201ENST00000371419 TRIM17Q9Y577 477 aa18.53■□□□□ 0.56
PFDN4-201ENST00000371419 DHX16O60231 1041 aaKnown RBP18.52■□□□□ 0.56
PFDN4-201ENST00000371419 ERCC3P19447 782 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms