RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 RNF113AO15541 343 aaKnown RBP17.62■□□□□ 0.41
LMO4-201ENST00000370542 PI4K2BQ8TCG2 481 aa17.62■□□□□ 0.41
LMO4-201ENST00000370542 GPATCH3Q96I76 525 aa17.62■□□□□ 0.41
LMO4-201ENST00000370542 MROH8Q9H579 483 aa17.62■□□□□ 0.41
LMO4-201ENST00000370542 FRMPD3Q5JV73 1810 aa17.61■□□□□ 0.41
LMO4-201ENST00000370542 MSCO60682 206 aa17.61■□□□□ 0.41
LMO4-201ENST00000370542 ERCC3P19447 782 aa17.61■□□□□ 0.41
LMO4-201ENST00000370542 RASA1P20936 1047 aa17.61■□□□□ 0.41
LMO4-201ENST00000370542 ADORA2AP29274 412 aa17.61■□□□□ 0.41
LMO4-201ENST00000370542 HS1BP3Q53T59 392 aa17.61■□□□□ 0.41
LMO4-201ENST00000370542 TRPV1Q8NER1 839 aa17.61■□□□□ 0.41
LMO4-201ENST00000370542 ATG4CQ96DT6 458 aa17.61■□□□□ 0.41
LMO4-201ENST00000370542 CWC22Q9HCG8 908 aaKnown RBP17.61■□□□□ 0.41
LMO4-201ENST00000370542 IGKV6D-41A0A0C4DH26 115 aa17.6■□□□□ 0.41
LMO4-201ENST00000370542 GPAA1O43292 621 aa17.6■□□□□ 0.41
LMO4-201ENST00000370542 COBLO75128 1261 aa17.6■□□□□ 0.41
LMO4-201ENST00000370542 FLOT1O75955 427 aa17.6■□□□□ 0.41
LMO4-201ENST00000370542 CYBAP13498 195 aa17.6■□□□□ 0.41
LMO4-201ENST00000370542 GNAT2P19087 354 aa17.6■□□□□ 0.41
LMO4-201ENST00000370542 DDIT3P35638 169 aa17.6■□□□□ 0.41
LMO4-201ENST00000370542 ATP2B2Q01814 1243 aa17.6■□□□□ 0.41
LMO4-201ENST00000370542 TMEM132BQ14DG7 1078 aa17.6■□□□□ 0.41
LMO4-201ENST00000370542 WDR78Q5VTH9 848 aa17.6■□□□□ 0.41
LMO4-201ENST00000370542 TSHZ3Q63HK5 1081 aa17.6■□□□□ 0.41
LMO4-201ENST00000370542 SPICE1Q8N0Z3 855 aa17.6■□□□□ 0.41
LMO4-201ENST00000370542 REPS2Q8NFH8 660 aa17.6■□□□□ 0.41
LMO4-201ENST00000370542 PDCL3Q9H2J4 239 aa17.6■□□□□ 0.41
LMO4-201ENST00000370542 EPB41L4AQ9HCS5 686 aaPredicted RBP17.6■□□□□ 0.41
LMO4-201ENST00000370542 NYAP2Q9P242 653 aa17.6■□□□□ 0.41
LMO4-201ENST00000370542 DDX20Q9UHI6 824 aaKnown RBP17.6■□□□□ 0.41
LMO4-201ENST00000370542 SALL3Q9BXA9 1300 aa17.6■□□□□ 0.41
LMO4-201ENST00000370542 SLC25A27O95847 323 aa17.59■□□□□ 0.41
LMO4-201ENST00000370542 ZNF697Q5TEC3 545 aa17.59■□□□□ 0.41
LMO4-201ENST00000370542 PPP1R9AQ9ULJ8 1098 aa17.59■□□□□ 0.41
LMO4-201ENST00000370542 CDH23Q9H251 3354 aa17.59■□□□□ 0.41
LMO4-201ENST00000370542 ZNFX1Q9P2E3 1918 aaKnown RBP17.59■□□□□ 0.41
LMO4-201ENST00000370542 PATL2C9JE40 543 aaKnown RBP17.58■□□□□ 0.4
LMO4-201ENST00000370542 CYP2C19P33261 490 aa17.58■□□□□ 0.4
LMO4-201ENST00000370542 MAPK8IP2Q13387 824 aaPredicted RBP17.58■□□□□ 0.4
LMO4-201ENST00000370542 DPP9Q86TI2 863 aa17.58■□□□□ 0.4
LMO4-201ENST00000370542 RIOX2Q8IUF8 465 aa17.58■□□□□ 0.4
LMO4-201ENST00000370542 MKL1Q969V6 931 aa17.58■□□□□ 0.4
LMO4-201ENST00000370542 GOPCQ9HD26 462 aa17.58■□□□□ 0.4
LMO4-201ENST00000370542 ZNF214Q9UL59 606 aaPredicted RBP17.58■□□□□ 0.4
LMO4-201ENST00000370542 SYNPO2Q9UMS6 1093 aa17.58■□□□□ 0.4
LMO4-201ENST00000370542 COL11A1P12107 1806 aaPredicted RBP17.58■□□□□ 0.4
LMO4-201ENST00000370542 M0R2C6 588 aa17.57■□□□□ 0.4
LMO4-201ENST00000370542 VWA5AO00534 786 aa17.57■□□□□ 0.4
LMO4-201ENST00000370542 ERC2O15083 957 aa17.57■□□□□ 0.4
LMO4-201ENST00000370542 LRRFIP1Q32MZ4 808 aaKnown RBP17.57■□□□□ 0.4
LMO4-201ENST00000370542 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.57■□□□□ 0.4
LMO4-201ENST00000370542 CLEC17AQ6ZS10 378 aa17.57■□□□□ 0.4
LMO4-201ENST00000370542 PPP1R9BQ96SB3 815 aa17.57■□□□□ 0.4
LMO4-201ENST00000370542 SEMA6BQ9H3T3 888 aa17.57■□□□□ 0.4
LMO4-201ENST00000370542 FBXO28Q9NVF7 368 aa17.57■□□□□ 0.4
LMO4-201ENST00000370542 LRRC26Q2I0M4 334 aa17.56■□□□□ 0.4
LMO4-201ENST00000370542 ZMYM1Q5SVZ6 1142 aa17.56■□□□□ 0.4
LMO4-201ENST00000370542 MTERF4Q7Z6M4 381 aaKnown RBP17.56■□□□□ 0.4
LMO4-201ENST00000370542 IFNL3Q8IZI9 196 aa17.56■□□□□ 0.4
LMO4-201ENST00000370542 OTUD7AQ8TE49 926 aaPredicted RBP17.56■□□□□ 0.4
LMO4-201ENST00000370542 MAML3Q96JK9 1138 aa17.56■□□□□ 0.4
LMO4-201ENST00000370542 MKNK2Q9HBH9 465 aa17.56■□□□□ 0.4
LMO4-201ENST00000370542 SLC5A4Q9NY91 659 aa17.56■□□□□ 0.4
LMO4-201ENST00000370542 NRBP1Q9UHY1 535 aa17.56■□□□□ 0.4
LMO4-201ENST00000370542 DIS3Q9Y2L1 958 aaKnown RBP17.56■□□□□ 0.4
LMO4-201ENST00000370542 PLIN4Q96Q06 1357 aa17.55■□□□□ 0.4
LMO4-201ENST00000370542 MINDY4BA8MYZ0 360 aa17.55■□□□□ 0.4
LMO4-201ENST00000370542 F5H6K3 240 aa17.55■□□□□ 0.4
LMO4-201ENST00000370542 DNM1LO00429 736 aa17.55■□□□□ 0.4
LMO4-201ENST00000370542 ATP2A1O14983 1001 aa17.55■□□□□ 0.4
LMO4-201ENST00000370542 SEPT4O43236 478 aa17.55■□□□□ 0.4
LMO4-201ENST00000370542 FCER1AP12319 257 aa17.55■□□□□ 0.4
LMO4-201ENST00000370542 COPB2P35606 906 aa17.55■□□□□ 0.4
LMO4-201ENST00000370542 KLRC3Q07444 240 aa17.55■□□□□ 0.4
LMO4-201ENST00000370542 TJAP1Q5JTD0 557 aa17.55■□□□□ 0.4
LMO4-201ENST00000370542 FAM83BQ5T0W9 1011 aa17.55■□□□□ 0.4
LMO4-201ENST00000370542 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.55■□□□□ 0.44e-6■■■■□ 26
LMO4-201ENST00000370542 NCAPG2Q86XI2 1143 aa17.55■□□□□ 0.4
LMO4-201ENST00000370542 STAT3P40763 770 aa17.54■□□□□ 0.4
LMO4-201ENST00000370542 MDM2Q00987 491 aaPredicted RBP17.54■□□□□ 0.4
LMO4-201ENST00000370542 PLS1Q14651 629 aa17.54■□□□□ 0.4
LMO4-201ENST00000370542 ZNF792Q3KQV3 632 aa17.54■□□□□ 0.4
LMO4-201ENST00000370542 SEC62Q99442 399 aaKnown RBP17.54■□□□□ 0.4
LMO4-201ENST00000370542 ZNF287Q9HBT7 754 aa17.54■□□□□ 0.4
LMO4-201ENST00000370542 MTMR4Q9NYA4 1195 aa17.54■□□□□ 0.4
LMO4-201ENST00000370542 FOXP2O15409 715 aa17.53■□□□□ 0.4
LMO4-201ENST00000370542 NDUFB10O96000 172 aa17.53■□□□□ 0.4
LMO4-201ENST00000370542 MX1P20591 662 aa17.53■□□□□ 0.4
LMO4-201ENST00000370542 MFAP1P55081 439 aaKnown RBP17.53■□□□□ 0.4
LMO4-201ENST00000370542 TICAM2Q86XR7 235 aa17.53■□□□□ 0.4
LMO4-201ENST00000370542 NEDD1Q8NHV4 660 aa17.53■□□□□ 0.4
LMO4-201ENST00000370542 PANK2Q9BZ23 570 aa17.53■□□□□ 0.4
LMO4-201ENST00000370542 SMCHD1A6NHR9 2005 aa17.52■□□□□ 0.4
LMO4-201ENST00000370542 CNGA1P29973 690 aa17.52■□□□□ 0.4
LMO4-201ENST00000370542 TDO2P48775 406 aa17.52■□□□□ 0.4
LMO4-201ENST00000370542 ZNF444Q8N0Y2 327 aaPredicted RBP17.52■□□□□ 0.4
LMO4-201ENST00000370542 PRPF38AQ8NAV1 312 aaKnown RBP17.52■□□□□ 0.4
LMO4-201ENST00000370542 ARRDC4Q8NCT1 418 aa17.52■□□□□ 0.4
LMO4-201ENST00000370542 MYLIPQ8WY64 445 aa17.52■□□□□ 0.4
LMO4-201ENST00000370542 SLF1Q9BQI6 1058 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms