RNA–Protein interactions for RNA: ENST00000370214.8

ABCD3-202, Transcript of ATP binding cassette subfamily D member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD3, Length 3,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-202ENST00000370214 DEF6Q9H4E7 631 aa8.26□□□□□ -1.09
ABCD3-202ENST00000370214 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.26□□□□□ -1.09
ABCD3-202ENST00000370214 FAN1Q9Y2M0 1017 aa8.26□□□□□ -1.09
ABCD3-202ENST00000370214 LMTK3Q96Q04 1460 aa8.26□□□□□ -1.09
ABCD3-202ENST00000370214 CTAGE9A4FU28 777 aa8.26□□□□□ -1.09
ABCD3-202ENST00000370214 POTEMA6NI47 508 aa8.26□□□□□ -1.09
ABCD3-202ENST00000370214 KIF2AO00139 706 aaPredicted RBP8.26□□□□□ -1.09
ABCD3-202ENST00000370214 NCK2O43639 380 aa8.26□□□□□ -1.09
ABCD3-202ENST00000370214 NTSR2O95665 410 aa8.26□□□□□ -1.09
ABCD3-202ENST00000370214 TBC1D8O95759 1140 aa8.26□□□□□ -1.09
ABCD3-202ENST00000370214 TBC1D8BQ0IIM8 1120 aa8.26□□□□□ -1.09
ABCD3-202ENST00000370214 SYCP1Q15431 976 aa8.26□□□□□ -1.09
ABCD3-202ENST00000370214 SEC23AQ15436 765 aa8.26□□□□□ -1.09
ABCD3-202ENST00000370214 CCDC96Q2M329 555 aa8.26□□□□□ -1.09
ABCD3-202ENST00000370214 SHROOM1Q2M3G4 852 aaPredicted RBP8.26□□□□□ -1.09
ABCD3-202ENST00000370214 ANKRD20A12PQ8NF67 263 aa8.26□□□□□ -1.09
ABCD3-202ENST00000370214 GOLPH3Q9H4A6 298 aa8.26□□□□□ -1.09
ABCD3-202ENST00000370214 MAGEC2Q9UBF1 373 aaPredicted RBP8.26□□□□□ -1.09
ABCD3-202ENST00000370214 AFDNP55196 1824 aaKnown RBP8.26□□□□□ -1.09
ABCD3-202ENST00000370214 RBAK-RBAKDNI3L0D1 243 aa8.26□□□□□ -1.09
ABCD3-202ENST00000370214 STX10O60499 249 aa8.26□□□□□ -1.09
ABCD3-202ENST00000370214 TXLNAP40222 546 aa8.26□□□□□ -1.09
ABCD3-202ENST00000370214 STK4Q13043 487 aa8.26□□□□□ -1.09
ABCD3-202ENST00000370214 NKX1-1Q15270 411 aaPredicted RBP8.26□□□□□ -1.09
ABCD3-202ENST00000370214 EZH2Q15910 746 aaKnown RBP8.26□□□□□ -1.09
ABCD3-202ENST00000370214 CCDC93Q567U6 631 aa8.26□□□□□ -1.09
ABCD3-202ENST00000370214 TAF3Q5VWG9 929 aa8.26□□□□□ -1.09
ABCD3-202ENST00000370214 NSUN4Q96CB9 384 aaKnown RBP8.26□□□□□ -1.09
ABCD3-202ENST00000370214 TIGD1Q96MW7 591 aa8.26□□□□□ -1.09
ABCD3-202ENST00000370214 FAM107BQ9H098 131 aa8.26□□□□□ -1.09
ABCD3-202ENST00000370214 RSPH14Q9UHP6 348 aa8.26□□□□□ -1.09
ABCD3-202ENST00000370214 PACSIN2Q9UNF0 486 aaPredicted RBP8.26□□□□□ -1.09
ABCD3-202ENST00000370214 ATP1A1P05023 1023 aaKnown RBP8.25□□□□□ -1.09
ABCD3-202ENST00000370214 PARP1P09874 1014 aaKnown RBP8.25□□□□□ -1.09
ABCD3-202ENST00000370214 CAPN2P17655 700 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 RBM5P52756 815 aaKnown RBP eCLIP8.25□□□□□ -1.09
ABCD3-202ENST00000370214 C2orf54Q08AI8 447 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 TXNRD1Q16881 649 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 DOK7Q18PE1 504 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 TDRD12Q587J7 1177 aaKnown RBP8.25□□□□□ -1.09
ABCD3-202ENST00000370214 TMTC3Q6ZXV5 915 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 BLIDQ8IZY5 108 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 PIGSQ96S52 555 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 LACRTQ9GZZ8 138 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 L2HGDHQ9H9P8 463 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 ADD3Q9UEY8 706 aaKnown RBP8.25□□□□□ -1.09
ABCD3-202ENST00000370214 KLRF2D3W0D1 207 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 MFAP3LO75121 409 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 H2AFXP16104 143 aaPredicted RBP8.25□□□□□ -1.09
ABCD3-202ENST00000370214 MKRN4PQ13434 485 aaPredicted RBP8.25□□□□□ -1.09
ABCD3-202ENST00000370214 TMTC2Q8N394 836 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 BBXQ8WY36 941 aaPredicted RBP8.25□□□□□ -1.09
ABCD3-202ENST00000370214 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.25□□□□□ -1.09
ABCD3-202ENST00000370214 PHF20Q9BVI0 1012 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 MLXIPQ9HAP2 919 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 IL17RBQ9NRM6 502 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 BMP2KQ9NSY1 1161 aaPredicted RBP8.25□□□□□ -1.09
ABCD3-202ENST00000370214 LCMT1Q9UIC8 334 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 LUC7L2Q9Y383 392 aaKnown RBP8.25□□□□□ -1.09
ABCD3-202ENST00000370214 MRFAP1Q9Y605 127 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 COL5A2P05997 1499 aaPredicted RBP8.25□□□□□ -1.09
ABCD3-202ENST00000370214 ABCC12Q96J65 1359 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 ESYT3A0FGR9 886 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 SMCO2A6NFE2 343 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 LDHBP07195 334 aaKnown RBP8.25□□□□□ -1.09
ABCD3-202ENST00000370214 ZNF18P17022 549 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 PLCG1P19174 1290 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 C2CD5Q86YS7 1000 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 ZSCAN29Q8IWY8 852 aaPredicted RBP8.25□□□□□ -1.09
ABCD3-202ENST00000370214 LRRC15Q8TF66 581 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 CDK5RAP3Q96JB5 506 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 PLA2G12BQ9BX93 195 aa8.25□□□□□ -1.09
ABCD3-202ENST00000370214 NPHP3-ACAD11A0A0J9YXS1 232 aa8.24□□□□□ -1.09
ABCD3-202ENST00000370214 CTAGE15A4D2H0 777 aa8.24□□□□□ -1.09
ABCD3-202ENST00000370214 RCCD1A6NED2 376 aa8.24□□□□□ -1.09
ABCD3-202ENST00000370214 EFCAB8A8MWE9 144 aa8.24□□□□□ -1.09
ABCD3-202ENST00000370214 UBAP1LF5GYI3 381 aa8.24□□□□□ -1.09
ABCD3-202ENST00000370214 G3V3G9 751 aa8.24□□□□□ -1.09
ABCD3-202ENST00000370214 CYTH3O43739 400 aa8.24□□□□□ -1.09
ABCD3-202ENST00000370214 CTAGE8P0CG41 777 aa8.24□□□□□ -1.09
ABCD3-202ENST00000370214 MAP3K9P80192 1104 aa8.24□□□□□ -1.09
ABCD3-202ENST00000370214 DCAF8Q5TAQ9 597 aa8.24□□□□□ -1.09
ABCD3-202ENST00000370214 KCTD1Q719H9 257 aa8.24□□□□□ -1.09
ABCD3-202ENST00000370214 CTAGE6Q86UF2 777 aa8.24□□□□□ -1.09
ABCD3-202ENST00000370214 KSR1Q8IVT5 923 aa8.24□□□□□ -1.09
ABCD3-202ENST00000370214 CTAGE4Q8IX94 777 aa8.24□□□□□ -1.09
ABCD3-202ENST00000370214 MMS19Q96T76 1030 aa8.24□□□□□ -1.09
ABCD3-202ENST00000370214 BPIFA3Q9BQP9 254 aa8.24□□□□□ -1.09
ABCD3-202ENST00000370214 RNF26Q9BY78 433 aaPredicted RBP8.24□□□□□ -1.09
ABCD3-202ENST00000370214 EPN1Q9Y6I3 576 aaPredicted RBP8.24□□□□□ -1.09
ABCD3-202ENST00000370214 USP17L5A8MUK1 530 aa8.24□□□□□ -1.09
ABCD3-202ENST00000370214 IPO7O95373 1038 aaKnown RBP8.24□□□□□ -1.09
ABCD3-202ENST00000370214 GNAT2P19087 354 aa8.24□□□□□ -1.09
ABCD3-202ENST00000370214 PLS1Q14651 629 aa8.24□□□□□ -1.09
ABCD3-202ENST00000370214 KCTD16Q68DU8 428 aa8.24□□□□□ -1.09
ABCD3-202ENST00000370214 NOC4LQ9BVI4 516 aaKnown RBP8.24□□□□□ -1.09
ABCD3-202ENST00000370214 EHD4Q9H223 541 aa8.24□□□□□ -1.09
ABCD3-202ENST00000370214 BCAS3Q9H6U6 928 aa8.24□□□□□ -1.09
ABCD3-202ENST00000370214 ABHD10Q9NUJ1 306 aa8.24□□□□□ -1.09
ABCD3-202ENST00000370214 A0A1B0GTH6 734 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms