RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 C9orf131Q5VYM1 1079 aa16.21■□□□□ 0.19
HMGCS2-201ENST00000369406 CCAR1Q8IX12 1150 aaKnown RBP16.21■□□□□ 0.19
HMGCS2-201ENST00000369406 COA7Q96BR5 231 aa16.21■□□□□ 0.19
HMGCS2-201ENST00000369406 CLIC6Q96NY7 704 aa16.21■□□□□ 0.19
HMGCS2-201ENST00000369406 MYH7BA7E2Y1 1941 aa16.21■□□□□ 0.19
HMGCS2-201ENST00000369406 XBP1P17861 261 aa16.21■□□□□ 0.19
HMGCS2-201ENST00000369406 CAP2P40123 477 aa16.21■□□□□ 0.19
HMGCS2-201ENST00000369406 SNW1Q13573 536 aaKnown RBP16.21■□□□□ 0.19
HMGCS2-201ENST00000369406 RRP36Q96EU6 259 aaKnown RBP16.21■□□□□ 0.19
HMGCS2-201ENST00000369406 SMARCA1P28370 1054 aa16.2■□□□□ 0.18
HMGCS2-201ENST00000369406 DGKZQ13574 1117 aa16.2■□□□□ 0.18
HMGCS2-201ENST00000369406 CAMK4Q16566 473 aa16.2■□□□□ 0.18
HMGCS2-201ENST00000369406 CCDC183Q5T5S1 534 aa16.2■□□□□ 0.18
HMGCS2-201ENST00000369406 PIK3AP1Q6ZUJ8 805 aa16.2■□□□□ 0.18
HMGCS2-201ENST00000369406 GMCL1P1Q8NEA9 526 aa16.2■□□□□ 0.18
HMGCS2-201ENST00000369406 ENGASEQ8NFI3 743 aa16.2■□□□□ 0.18
HMGCS2-201ENST00000369406 SH3GLB2Q9NR46 395 aa16.2■□□□□ 0.18
HMGCS2-201ENST00000369406 GGA3Q9NZ52 723 aa16.2■□□□□ 0.18
HMGCS2-201ENST00000369406 PCDHA4Q9UN74 947 aa16.2■□□□□ 0.18
HMGCS2-201ENST00000369406 H7C1D1 291 aa16.2■□□□□ 0.18
HMGCS2-201ENST00000369406 SLC1A4P43007 532 aa16.2■□□□□ 0.18
HMGCS2-201ENST00000369406 BLIDQ8IZY5 108 aa16.2■□□□□ 0.18
HMGCS2-201ENST00000369406 MTMR8Q96EF0 704 aa16.2■□□□□ 0.18
HMGCS2-201ENST00000369406 PCDHA6Q9UN73 950 aa16.2■□□□□ 0.18
HMGCS2-201ENST00000369406 PCDHA8Q9Y5H6 950 aa16.2■□□□□ 0.18
HMGCS2-201ENST00000369406 OTOFQ9HC10 1997 aa16.2■□□□□ 0.18
HMGCS2-201ENST00000369406 A0A1B0GVL5 298 aa16.19■□□□□ 0.18
HMGCS2-201ENST00000369406 GOLGA6L4A6NEF3 574 aa16.19■□□□□ 0.18
HMGCS2-201ENST00000369406 TNNI2P48788 182 aa16.19■□□□□ 0.18
HMGCS2-201ENST00000369406 MMP14P50281 582 aa16.19■□□□□ 0.18
HMGCS2-201ENST00000369406 FSIP1Q8NA03 581 aa16.19■□□□□ 0.18
HMGCS2-201ENST00000369406 DCAF4Q8WV16 495 aa16.19■□□□□ 0.18
HMGCS2-201ENST00000369406 ISY1Q9ULR0 285 aaKnown RBP16.19■□□□□ 0.18
HMGCS2-201ENST00000369406 PAPPA2Q9BXP8 1791 aa16.19■□□□□ 0.18
HMGCS2-201ENST00000369406 NAPAP54920 295 aa16.19■□□□□ 0.18
HMGCS2-201ENST00000369406 ZYXQ15942 572 aaKnown RBP16.19■□□□□ 0.18
HMGCS2-201ENST00000369406 SHC4Q6S5L8 630 aa16.19■□□□□ 0.18
HMGCS2-201ENST00000369406 KCNG4Q8TDN1 519 aa16.19■□□□□ 0.18
HMGCS2-201ENST00000369406 PARP14Q460N5 1801 aa16.19■□□□□ 0.18
HMGCS2-201ENST00000369406 INPP5BP32019 993 aa16.18■□□□□ 0.18
HMGCS2-201ENST00000369406 NDUFA8P51970 172 aa16.18■□□□□ 0.18
HMGCS2-201ENST00000369406 RILPL1Q5EBL4 403 aa16.18■□□□□ 0.18
HMGCS2-201ENST00000369406 ADALQ6DHV7 355 aa16.18■□□□□ 0.18
HMGCS2-201ENST00000369406 ZMYND12Q9H0C1 365 aa16.18■□□□□ 0.18
HMGCS2-201ENST00000369406 TNFAIP1Q13829 316 aa16.18■□□□□ 0.18
HMGCS2-201ENST00000369406 SPECC1Q5M775 1068 aa16.18■□□□□ 0.18
HMGCS2-201ENST00000369406 GPATCH4Q5T3I0 446 aaKnown RBP16.18■□□□□ 0.18
HMGCS2-201ENST00000369406 LRSAM1Q6UWE0 723 aa16.18■□□□□ 0.18
HMGCS2-201ENST00000369406 DAGLBQ8NCG7 672 aa16.18■□□□□ 0.18
HMGCS2-201ENST00000369406 GMCL1Q96IK5 515 aa16.18■□□□□ 0.18
HMGCS2-201ENST00000369406 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.18■□□□□ 0.18
HMGCS2-201ENST00000369406 TMEM260Q9NX78 707 aa16.18■□□□□ 0.18
HMGCS2-201ENST00000369406 FBXO2Q9UK22 296 aaPredicted RBP16.18■□□□□ 0.18
HMGCS2-201ENST00000369406 TMX2Q9Y320 296 aa16.18■□□□□ 0.18
HMGCS2-201ENST00000369406 GOLGA6L3A6NEY3 463 aa16.17■□□□□ 0.18
HMGCS2-201ENST00000369406 ZNF174Q15697 407 aa16.17■□□□□ 0.18
HMGCS2-201ENST00000369406 RBSNQ9H1K0 784 aa16.17■□□□□ 0.18
HMGCS2-201ENST00000369406 SEC63Q9UGP8 760 aaKnown RBP16.17■□□□□ 0.18
HMGCS2-201ENST00000369406 SMCO2A6NFE2 343 aa16.17■□□□□ 0.18
HMGCS2-201ENST00000369406 QRICH1Q2TAL8 776 aa16.17■□□□□ 0.18
HMGCS2-201ENST00000369406 FMR1NBQ8N0W7 255 aaPredicted RBP16.17■□□□□ 0.18
HMGCS2-201ENST00000369406 FUCA2Q9BTY2 467 aa16.17■□□□□ 0.18
HMGCS2-201ENST00000369406 CLSTN2Q9H4D0 955 aa16.17■□□□□ 0.18
HMGCS2-201ENST00000369406 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.16■□□□□ 0.18
HMGCS2-201ENST00000369406 PNMA6FA0A0J9YX94 578 aa16.16■□□□□ 0.18
HMGCS2-201ENST00000369406 A0A1W2PQ27 194 aa16.16■□□□□ 0.18
HMGCS2-201ENST00000369406 A0A1W2PQ64 194 aa16.16■□□□□ 0.18
HMGCS2-201ENST00000369406 A0A1W2PQD8 194 aa16.16■□□□□ 0.18
HMGCS2-201ENST00000369406 TMEM232C9JQI7 657 aa16.16■□□□□ 0.18
HMGCS2-201ENST00000369406 PPP6R2O75170 966 aa16.16■□□□□ 0.18
HMGCS2-201ENST00000369406 XRCC6P12956 609 aaKnown RBP eCLIP16.16■□□□□ 0.18
HMGCS2-201ENST00000369406 PPP4R3BQ5MIZ7 849 aa16.16■□□□□ 0.18
HMGCS2-201ENST00000369406 MRPS27Q92552 414 aaKnown RBP16.16■□□□□ 0.18
HMGCS2-201ENST00000369406 PANK2Q9BZ23 570 aa16.16■□□□□ 0.18
HMGCS2-201ENST00000369406 BRMS1Q9HCU9 246 aa16.16■□□□□ 0.18
HMGCS2-201ENST00000369406 EDIL3O43854 480 aa16.16■□□□□ 0.18
HMGCS2-201ENST00000369406 CALML3P27482 149 aa16.16■□□□□ 0.18
HMGCS2-201ENST00000369406 TTC38Q5R3I4 469 aa16.16■□□□□ 0.18
HMGCS2-201ENST00000369406 FAM83BQ5T0W9 1011 aa16.16■□□□□ 0.18
HMGCS2-201ENST00000369406 CKAP2LQ8IYA6 745 aa16.16■□□□□ 0.18
HMGCS2-201ENST00000369406 SYAP1Q96A49 352 aaPredicted RBP16.16■□□□□ 0.18
HMGCS2-201ENST00000369406 WDR90Q96KV7 1748 aa16.15■□□□□ 0.18
HMGCS2-201ENST00000369406 ZBTB5O15062 677 aa16.15■□□□□ 0.18
HMGCS2-201ENST00000369406 BMP3P12645 472 aa16.15■□□□□ 0.18
HMGCS2-201ENST00000369406 PFKFB1P16118 471 aa16.15■□□□□ 0.18
HMGCS2-201ENST00000369406 CDC37Q16543 378 aaPredicted RBP16.15■□□□□ 0.18
HMGCS2-201ENST00000369406 INF2Q27J81 1249 aa16.15■□□□□ 0.18
HMGCS2-201ENST00000369406 USP49Q70CQ1 688 aa16.15■□□□□ 0.18
HMGCS2-201ENST00000369406 CCDC148Q8NFR7 591 aa16.15■□□□□ 0.18
HMGCS2-201ENST00000369406 ERCC4Q92889 916 aaPredicted RBP16.15■□□□□ 0.18
HMGCS2-201ENST00000369406 ZKSCAN4Q969J2 545 aaPredicted RBP16.15■□□□□ 0.18
HMGCS2-201ENST00000369406 NUP62CLQ9H1M0 184 aa16.15■□□□□ 0.18
HMGCS2-201ENST00000369406 BIN2Q9UBW5 565 aaPredicted RBP16.15■□□□□ 0.18
HMGCS2-201ENST00000369406 TRIM75PA6NK02 468 aa16.15■□□□□ 0.18
HMGCS2-201ENST00000369406 FAM160A1Q05DH4 1040 aa16.15■□□□□ 0.18
HMGCS2-201ENST00000369406 IL17AQ16552 155 aa16.15■□□□□ 0.18
HMGCS2-201ENST00000369406 ARHGEF10LQ9HCE6 1279 aa16.15■□□□□ 0.18
HMGCS2-201ENST00000369406 RLFQ13129 1914 aa16.14■□□□□ 0.18
HMGCS2-201ENST00000369406 A0A087WWV3 80 aa16.14■□□□□ 0.17
HMGCS2-201ENST00000369406 UBE2SQ16763 222 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms