RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 GSDMAQ96QA5 445 aa14.51□□□□□ -0.09
CHD1L-202ENST00000369258 ACBD3Q9H3P7 528 aa14.51□□□□□ -0.09
CHD1L-202ENST00000369258 FAM204AQ9H8W3 233 aa14.51□□□□□ -0.09
CHD1L-202ENST00000369258 DDX60Q8IY21 1712 aaKnown RBP14.51□□□□□ -0.09
CHD1L-202ENST00000369258 PDE2AO00408 941 aaPredicted RBP14.51□□□□□ -0.09
CHD1L-202ENST00000369258 SEMA3EO15041 775 aa14.51□□□□□ -0.09
CHD1L-202ENST00000369258 XBP1P17861 261 aa14.51□□□□□ -0.09
CHD1L-202ENST00000369258 TCP11X2Q5H9J9 407 aa14.51□□□□□ -0.09
CHD1L-202ENST00000369258 TMTC2Q8N394 836 aa14.51□□□□□ -0.09
CHD1L-202ENST00000369258 IQUBQ8NA54 791 aa14.51□□□□□ -0.09
CHD1L-202ENST00000369258 SLC44A5Q8NCS7 719 aa14.51□□□□□ -0.09
CHD1L-202ENST00000369258 ESR2Q92731 530 aa14.51□□□□□ -0.09
CHD1L-202ENST00000369258 KANSL2Q9H9L4 492 aa14.51□□□□□ -0.09
CHD1L-202ENST00000369258 MYH10P35580 1976 aa14.51□□□□□ -0.09
CHD1L-202ENST00000369258 MYH6P13533 1939 aa14.51□□□□□ -0.09
CHD1L-202ENST00000369258 PRDX5P30044 214 aa14.5□□□□□ -0.09
CHD1L-202ENST00000369258 C2orf54Q08AI8 447 aa14.5□□□□□ -0.09
CHD1L-202ENST00000369258 CYP26C1Q6V0L0 522 aa14.5□□□□□ -0.09
CHD1L-202ENST00000369258 CATIPQ7Z7H3 387 aa14.5□□□□□ -0.09
CHD1L-202ENST00000369258 MYO6Q9UM54 1294 aa14.5□□□□□ -0.09
CHD1L-202ENST00000369258 TUBBP07437 444 aa14.5□□□□□ -0.09
CHD1L-202ENST00000369258 PAK1Q13153 545 aa14.5□□□□□ -0.09
CHD1L-202ENST00000369258 CCDC122Q5T0U0 273 aa14.5□□□□□ -0.09
CHD1L-202ENST00000369258 SH3RF1Q7Z6J0 888 aa14.5□□□□□ -0.09
CHD1L-202ENST00000369258 ANKRD20A12PQ8NF67 263 aa14.5□□□□□ -0.09
CHD1L-202ENST00000369258 GJA10Q969M2 543 aa14.5□□□□□ -0.09
CHD1L-202ENST00000369258 GPR101Q96P66 508 aaPredicted RBP14.5□□□□□ -0.09
CHD1L-202ENST00000369258 EPN1Q9Y6I3 576 aaPredicted RBP14.5□□□□□ -0.09
CHD1L-202ENST00000369258 ENOX2Q16206 610 aaKnown RBP14.49□□□□□ -0.09
CHD1L-202ENST00000369258 INF2Q27J81 1249 aa14.49□□□□□ -0.09
CHD1L-202ENST00000369258 WDR59Q6PJI9 974 aa14.49□□□□□ -0.09
CHD1L-202ENST00000369258 MSL3Q8N5Y2 521 aaKnown RBP14.49□□□□□ -0.09
CHD1L-202ENST00000369258 FAM71BQ8TC56 605 aa14.49□□□□□ -0.09
CHD1L-202ENST00000369258 ITIH6Q6UXX5 1313 aa14.49□□□□□ -0.09
CHD1L-202ENST00000369258 NDUFA10O95299 355 aa14.49□□□□□ -0.09
CHD1L-202ENST00000369258 PARP1P09874 1014 aaKnown RBP14.49□□□□□ -0.09
CHD1L-202ENST00000369258 USP17L8P0C7I0 530 aa14.49□□□□□ -0.09
CHD1L-202ENST00000369258 FCER1AP12319 257 aa14.49□□□□□ -0.09
CHD1L-202ENST00000369258 HERVK_113P62684 666 aa14.49□□□□□ -0.09
CHD1L-202ENST00000369258 E2F4Q16254 413 aa14.49□□□□□ -0.09
CHD1L-202ENST00000369258 PDXDC2PQ6P474 469 aa14.49□□□□□ -0.09
CHD1L-202ENST00000369258 DNAAF5Q86Y56 855 aa14.49□□□□□ -0.09
CHD1L-202ENST00000369258 CCDC155Q8N6L0 562 aa14.49□□□□□ -0.09
CHD1L-202ENST00000369258 MYO1AQ9UBC5 1043 aa14.49□□□□□ -0.09
CHD1L-202ENST00000369258 USP17L3A6NCW0 530 aa14.49□□□□□ -0.09
CHD1L-202ENST00000369258 USP17L4A6NCW7 530 aa14.49□□□□□ -0.09
CHD1L-202ENST00000369258 RPN1P04843 607 aaKnown RBP14.49□□□□□ -0.09
CHD1L-202ENST00000369258 RNASE9P60153 205 aaKnown RBP14.49□□□□□ -0.09
CHD1L-202ENST00000369258 NKX1-1Q15270 411 aaPredicted RBP14.49□□□□□ -0.09
CHD1L-202ENST00000369258 CTR9Q6PD62 1173 aa14.49□□□□□ -0.09
CHD1L-202ENST00000369258 USP17L1Q7RTZ2 530 aa14.49□□□□□ -0.09
CHD1L-202ENST00000369258 CADPS2Q86UW7 1296 aa14.49□□□□□ -0.09
CHD1L-202ENST00000369258 GOLGA6L1Q8N7Z2 621 aa14.49□□□□□ -0.09
CHD1L-202ENST00000369258 CCDC148Q8NFR7 591 aa14.49□□□□□ -0.09
CHD1L-202ENST00000369258 CARD10Q9BWT7 1032 aa14.49□□□□□ -0.09
CHD1L-202ENST00000369258 VAT1LQ9HCJ6 419 aa14.49□□□□□ -0.09
CHD1L-202ENST00000369258 COL5A2P05997 1499 aaPredicted RBP14.49□□□□□ -0.09
CHD1L-202ENST00000369258 STAT6P42226 847 aa14.48□□□□□ -0.09
CHD1L-202ENST00000369258 PROCA1Q8NCQ7 364 aaPredicted RBP14.48□□□□□ -0.09
CHD1L-202ENST00000369258 FERMT2Q96AC1 680 aa14.48□□□□□ -0.09
CHD1L-202ENST00000369258 RRP36Q96EU6 259 aaKnown RBP14.48□□□□□ -0.09
CHD1L-202ENST00000369258 JADE2Q9NQC1 790 aa14.48□□□□□ -0.09
CHD1L-202ENST00000369258 PLEKHG2Q9H7P9 1386 aa14.48□□□□□ -0.09
CHD1L-202ENST00000369258 FECHP22830 423 aa14.48□□□□□ -0.09
CHD1L-202ENST00000369258 APBA1Q02410 837 aa14.48□□□□□ -0.09
CHD1L-202ENST00000369258 TXNRD3Q86VQ6 643 aa14.48□□□□□ -0.09
CHD1L-202ENST00000369258 TRIM47Q96LD4 638 aa14.48□□□□□ -0.09
CHD1L-202ENST00000369258 RIOK1Q9BRS2 568 aaKnown RBP14.48□□□□□ -0.09
CHD1L-202ENST00000369258 RNF26Q9BY78 433 aaPredicted RBP14.48□□□□□ -0.09
CHD1L-202ENST00000369258 CHD4Q14839 1912 aa14.47□□□□□ -0.09
CHD1L-202ENST00000369258 IGHMBP2P38935 993 aaKnown RBP14.47□□□□□ -0.09
CHD1L-202ENST00000369258 SPAG1Q07617 926 aa14.47□□□□□ -0.09
CHD1L-202ENST00000369258 NAALADL2Q58DX5 795 aa14.47□□□□□ -0.09
CHD1L-202ENST00000369258 CCDC178Q5BJE1 867 aa14.47□□□□□ -0.09
CHD1L-202ENST00000369258 TMC4Q7Z404 712 aa14.47□□□□□ -0.09
CHD1L-202ENST00000369258 CELF1Q92879 486 aaKnown RBP14.47□□□□□ -0.09
CHD1L-202ENST00000369258 RNF41Q9H4P4 317 aaPredicted RBP14.47□□□□□ -0.09
CHD1L-202ENST00000369258 LIMA1Q9UHB6 759 aaKnown RBP14.47□□□□□ -0.09
CHD1L-202ENST00000369258 NID2Q14112 1375 aa14.47□□□□□ -0.09
CHD1L-202ENST00000369258 EPHB6O15197 1021 aa14.47□□□□□ -0.09
CHD1L-202ENST00000369258 NCK2O43639 380 aa14.47□□□□□ -0.09
CHD1L-202ENST00000369258 RNF40O75150 1001 aa14.47□□□□□ -0.09
CHD1L-202ENST00000369258 BMP15O95972 392 aa14.47□□□□□ -0.09
CHD1L-202ENST00000369258 ATP6V1AP38606 617 aa14.47□□□□□ -0.09
CHD1L-202ENST00000369258 CAGE1Q8TC20 777 aa14.47□□□□□ -0.09
CHD1L-202ENST00000369258 TNFRSF25Q93038 417 aa14.47□□□□□ -0.09
CHD1L-202ENST00000369258 MED4Q9NPJ6 270 aa14.47□□□□□ -0.09
CHD1L-202ENST00000369258 MROH5Q6ZUA9 1318 aa14.47□□□□□ -0.09
CHD1L-202ENST00000369258 CDHR2Q9BYE9 1310 aa14.47□□□□□ -0.09
CHD1L-202ENST00000369258 COL1A1P02452 1464 aaPredicted RBP14.47□□□□□ -0.09
CHD1L-202ENST00000369258 TRIM21P19474 475 aaKnown RBP14.46□□□□□ -0.09
CHD1L-202ENST00000369258 EIF5P55010 431 aaKnown RBP14.46□□□□□ -0.09
CHD1L-202ENST00000369258 TRIM14Q14142 442 aa14.46□□□□□ -0.09
CHD1L-202ENST00000369258 KIAA1328Q86T90 577 aa14.46□□□□□ -0.09
CHD1L-202ENST00000369258 IQCA1Q86XH1 822 aa14.46□□□□□ -0.09
CHD1L-202ENST00000369258 MLXIPQ9HAP2 919 aa14.46□□□□□ -0.09
CHD1L-202ENST00000369258 BRMS1Q9HCU9 246 aa14.46□□□□□ -0.09
CHD1L-202ENST00000369258 CNTNAP5Q8WYK1 1306 aa14.46□□□□□ -0.09
CHD1L-202ENST00000369258 TSPY2A6NKD2 308 aa14.46□□□□□ -0.09
CHD1L-202ENST00000369258 GGCXP38435 758 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms