RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 CNPY2Q9Y2B0 182 aa11.05□□□□□ -0.64
SIM1-202ENST00000369208 DAPK3O43293 454 aa11.05□□□□□ -0.64
SIM1-202ENST00000369208 CCDC159P0C7I6 412 aa11.05□□□□□ -0.64
SIM1-202ENST00000369208 HELBQ8NG08 1087 aaPredicted RBP11.05□□□□□ -0.64
SIM1-202ENST00000369208 PLBD2Q8NHP8 589 aa11.05□□□□□ -0.64
SIM1-202ENST00000369208 BRF1Q92994 677 aa11.05□□□□□ -0.64
SIM1-202ENST00000369208 HELLSQ9NRZ9 838 aa11.05□□□□□ -0.64
SIM1-202ENST00000369208 DACT1Q9NYF0 836 aa11.05□□□□□ -0.64
SIM1-202ENST00000369208 IFNKQ9P0W0 207 aa11.05□□□□□ -0.64
SIM1-202ENST00000369208 RNF123Q5XPI4 1314 aa11.05□□□□□ -0.64
SIM1-202ENST00000369208 TUBA3CQ13748 450 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 IQUBQ8NA54 791 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 RIOK1Q9BRS2 568 aaKnown RBP11.04□□□□□ -0.64
SIM1-202ENST00000369208 KLC1Q07866 573 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 EGFL6Q8IUX8 553 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 LMBRD1Q9NUN5 540 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 CALCOCO2Q13137 446 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 MROH5Q6ZUA9 1318 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 PIK3C2GO75747 1445 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 HOXB7P09629 217 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 TPP2P29144 1249 aaPredicted RBP11.04□□□□□ -0.64
SIM1-202ENST00000369208 ATP8B2P98198 1209 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 MYL5Q02045 173 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 SP4Q02446 784 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 C6orf118Q5T5N4 469 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 OTUD6AQ7L8S5 288 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 BICC1Q9H694 974 aaKnown RBP11.04□□□□□ -0.64
SIM1-202ENST00000369208 KCNK9Q9NPC2 374 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 TRPC5Q9UL62 973 aaPredicted RBP11.04□□□□□ -0.64
SIM1-202ENST00000369208 GOLGA8QA0A0J9YX86 632 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 GOLGA8OA6NCC3 632 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 GOLGA8NF8WBI6 632 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 H0YCG3 227 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 ANKRD20A3Q5VUR7 823 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 CHURC1Q8WUH1 139 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 CACTINQ8WUQ7 758 aaKnown RBP11.04□□□□□ -0.64
SIM1-202ENST00000369208 TTC1Q99614 292 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 NUP58Q9BVL2 599 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 PPANQ9NQ55 473 aaKnown RBP11.04□□□□□ -0.64
SIM1-202ENST00000369208 MKL2Q9ULH7 1088 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 LZTFL1Q9NQ48 299 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 ARHGEF35A5YM69 484 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 HSPA2P54652 639 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 OSBPL1AQ9BXW6 950 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 IL1RAPL1Q9NZN1 696 aa11.04□□□□□ -0.64
SIM1-202ENST00000369208 KIF21AQ7Z4S6 1674 aa11.03□□□□□ -0.64
SIM1-202ENST00000369208 HNRNPCL1O60812 293 aaKnown RBP11.03□□□□□ -0.64
SIM1-202ENST00000369208 ATF7P17544 494 aaPredicted RBP11.03□□□□□ -0.64
SIM1-202ENST00000369208 SLC1A4P43007 532 aa11.03□□□□□ -0.64
SIM1-202ENST00000369208 AFMP43652 599 aa11.03□□□□□ -0.64
SIM1-202ENST00000369208 MYLK4Q86YV6 388 aaPredicted RBP11.03□□□□□ -0.64
SIM1-202ENST00000369208 WDR75Q8IWA0 830 aaKnown RBP11.03□□□□□ -0.64
SIM1-202ENST00000369208 UBAP1Q9NZ09 502 aa11.03□□□□□ -0.64
SIM1-202ENST00000369208 ATP10AO60312 1499 aa11.03□□□□□ -0.64
SIM1-202ENST00000369208 ADCY2Q08462 1091 aa11.03□□□□□ -0.64
SIM1-202ENST00000369208 SAR1BQ9Y6B6 198 aa11.03□□□□□ -0.64
SIM1-202ENST00000369208 SYCP2Q9BX26 1530 aa11.03□□□□□ -0.64
SIM1-202ENST00000369208 RNMTO43148 476 aaKnown RBP11.03□□□□□ -0.64
SIM1-202ENST00000369208 HOXA7P31268 230 aaPredicted RBP11.03□□□□□ -0.64
SIM1-202ENST00000369208 CCDC42Q96M95 316 aa11.03□□□□□ -0.64
SIM1-202ENST00000369208 FAM193BQ96PV7 902 aaPredicted RBP11.03□□□□□ -0.64
SIM1-202ENST00000369208 AGTPBP1Q9UPW5 1226 aa11.03□□□□□ -0.64
SIM1-202ENST00000369208 SEL1L2Q5TEA6 688 aa11.03□□□□□ -0.64
SIM1-202ENST00000369208 FBXO38Q6PIJ6 1188 aa11.03□□□□□ -0.64
SIM1-202ENST00000369208 SCHIP1Q9P0W5 487 aaPredicted RBP11.03□□□□□ -0.64
SIM1-202ENST00000369208 I3L4J1 428 aa11.03□□□□□ -0.64
SIM1-202ENST00000369208 GABPAQ06546 454 aa11.03□□□□□ -0.64
SIM1-202ENST00000369208 CCDC122Q5T0U0 273 aa11.03□□□□□ -0.64
SIM1-202ENST00000369208 RINLQ6ZS11 566 aa11.03□□□□□ -0.64
SIM1-202ENST00000369208 CXorf38Q8TB03 319 aa11.03□□□□□ -0.64
SIM1-202ENST00000369208 DDX21Q9NR30 783 aaKnown RBP eCLIP11.03□□□□□ -0.64
SIM1-202ENST00000369208 MAFGO15525 162 aa11.03□□□□□ -0.64
SIM1-202ENST00000369208 PSMC1P62191 440 aaKnown RBP11.03□□□□□ -0.64
SIM1-202ENST00000369208 PSMD6Q15008 389 aa11.03□□□□□ -0.64
SIM1-202ENST00000369208 CNNM4Q6P4Q7 775 aa11.03□□□□□ -0.64
SIM1-202ENST00000369208 TMEM87BQ96K49 555 aa11.03□□□□□ -0.64
SIM1-202ENST00000369208 SMIM23A6NLE4 172 aa11.02□□□□□ -0.64
SIM1-202ENST00000369208 CCDC169A6NNP5 214 aa11.02□□□□□ -0.64
SIM1-202ENST00000369208 RASGRF2O14827 1237 aa11.02□□□□□ -0.64
SIM1-202ENST00000369208 EPHB4P54760 987 aa11.02□□□□□ -0.64
SIM1-202ENST00000369208 ARID5AQ03989 594 aa11.02□□□□□ -0.64
SIM1-202ENST00000369208 FAM98CQ17RN3 349 aaKnown RBP11.02□□□□□ -0.64
SIM1-202ENST00000369208 CABLES1Q8TDN4 633 aa11.02□□□□□ -0.64
SIM1-202ENST00000369208 TARSL2A2RTX5 802 aaKnown RBP11.02□□□□□ -0.64
SIM1-202ENST00000369208 BIN1O00499 593 aa11.02□□□□□ -0.64
SIM1-202ENST00000369208 CCDC13Q8IYE1 715 aa11.02□□□□□ -0.64
SIM1-202ENST00000369208 SGSM2O43147 1006 aa11.02□□□□□ -0.65
SIM1-202ENST00000369208 FAM160A1Q05DH4 1040 aa11.02□□□□□ -0.65
SIM1-202ENST00000369208 RSPH3Q86UC2 560 aa11.02□□□□□ -0.65
SIM1-202ENST00000369208 TRIM63Q969Q1 353 aa11.02□□□□□ -0.65
SIM1-202ENST00000369208 GUCA1BQ9UMX6 200 aa11.02□□□□□ -0.65
SIM1-202ENST00000369208 BCS1LQ9Y276 419 aa11.02□□□□□ -0.65
SIM1-202ENST00000369208 TMC4Q7Z404 712 aa11.02□□□□□ -0.65
SIM1-202ENST00000369208 CFAP36Q96G28 342 aa11.02□□□□□ -0.65
SIM1-202ENST00000369208 EPS15L1Q9UBC2 864 aa11.02□□□□□ -0.65
SIM1-202ENST00000369208 SEPT3Q9UH03 358 aa11.02□□□□□ -0.65
SIM1-202ENST00000369208 RBM8AQ9Y5S9 174 aaKnown RBP11.02□□□□□ -0.65
SIM1-202ENST00000369208 S100BP04271 92 aaPredicted RBP11.02□□□□□ -0.65
SIM1-202ENST00000369208 PAPOLAP51003 745 aaKnown RBP11.02□□□□□ -0.65
SIM1-202ENST00000369208 NDUFA5Q16718 116 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms