RNA–Protein interactions for RNA: ENST00000369130.7

VPS45-202, Transcript of vacuolar protein sorting 45 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS45, Length 2,790 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-202ENST00000369130 ATP6V1AP38606 617 aa11.05□□□□□ -0.64
VPS45-202ENST00000369130 HERVK_113P62684 666 aa11.05□□□□□ -0.64
VPS45-202ENST00000369130 BRD3Q15059 726 aa11.05□□□□□ -0.64
VPS45-202ENST00000369130 E2F4Q16254 413 aa11.05□□□□□ -0.64
VPS45-202ENST00000369130 PTPROQ16827 1216 aa11.05□□□□□ -0.64
VPS45-202ENST00000369130 CYP26C1Q6V0L0 522 aa11.05□□□□□ -0.64
VPS45-202ENST00000369130 SLC44A5Q8NCS7 719 aa11.05□□□□□ -0.64
VPS45-202ENST00000369130 ZNF512BQ96KM6 892 aaPredicted RBP11.05□□□□□ -0.64
VPS45-202ENST00000369130 RNF41Q9H4P4 317 aaPredicted RBP11.05□□□□□ -0.64
VPS45-202ENST00000369130 EP400Q96L91 3159 aa11.04□□□□□ -0.64
VPS45-202ENST00000369130 USP17L3A6NCW0 530 aa11.04□□□□□ -0.64
VPS45-202ENST00000369130 USP17L4A6NCW7 530 aa11.04□□□□□ -0.64
VPS45-202ENST00000369130 TSPY2A6NKD2 308 aa11.04□□□□□ -0.64
VPS45-202ENST00000369130 PDE2AO00408 941 aaPredicted RBP11.04□□□□□ -0.64
VPS45-202ENST00000369130 FCER1AP12319 257 aa11.04□□□□□ -0.64
VPS45-202ENST00000369130 HSP90B2PQ58FF3 399 aa11.04□□□□□ -0.64
VPS45-202ENST00000369130 CCDC178Q5BJE1 867 aa11.04□□□□□ -0.64
VPS45-202ENST00000369130 WDR59Q6PJI9 974 aa11.04□□□□□ -0.64
VPS45-202ENST00000369130 USP17L1Q7RTZ2 530 aa11.04□□□□□ -0.64
VPS45-202ENST00000369130 CTCFLQ8NI51 663 aaPredicted RBP11.04□□□□□ -0.64
VPS45-202ENST00000369130 KANSL2Q9H9L4 492 aa11.04□□□□□ -0.64
VPS45-202ENST00000369130 RRP15Q9Y3B9 282 aaKnown RBP11.04□□□□□ -0.64
VPS45-202ENST00000369130 TRIM21P19474 475 aaKnown RBP11.04□□□□□ -0.64
VPS45-202ENST00000369130 ACTN2P35609 894 aa11.04□□□□□ -0.64
VPS45-202ENST00000369130 RNASE9P60153 205 aaKnown RBP11.04□□□□□ -0.64
VPS45-202ENST00000369130 LEKR1Q6ZMV7 388 aa11.04□□□□□ -0.64
VPS45-202ENST00000369130 HEATR3Q7Z4Q2 680 aa11.04□□□□□ -0.64
VPS45-202ENST00000369130 ZNF34Q8IZ26 560 aa11.04□□□□□ -0.64
VPS45-202ENST00000369130 GPR101Q96P66 508 aaPredicted RBP11.04□□□□□ -0.64
VPS45-202ENST00000369130 CTAGE1Q96RT6 745 aa11.04□□□□□ -0.64
VPS45-202ENST00000369130 RIOK1Q9BRS2 568 aaKnown RBP11.04□□□□□ -0.64
VPS45-202ENST00000369130 BRMS1Q9HCU9 246 aa11.04□□□□□ -0.64
VPS45-202ENST00000369130 PRPF3O43395 683 aaKnown RBP11.03□□□□□ -0.64
VPS45-202ENST00000369130 RNF40O75150 1001 aa11.03□□□□□ -0.64
VPS45-202ENST00000369130 ATP2C1P98194 919 aaPredicted RBP11.03□□□□□ -0.64
VPS45-202ENST00000369130 TMTC3Q6ZXV5 915 aa11.03□□□□□ -0.64
VPS45-202ENST00000369130 TMTC1Q8IUR5 882 aa11.03□□□□□ -0.64
VPS45-202ENST00000369130 TMTC2Q8N394 836 aa11.03□□□□□ -0.64
VPS45-202ENST00000369130 CCDC155Q8N6L0 562 aa11.03□□□□□ -0.64
VPS45-202ENST00000369130 GJA10Q969M2 543 aa11.03□□□□□ -0.64
VPS45-202ENST00000369130 LUC7L2Q9Y383 392 aaKnown RBP11.03□□□□□ -0.64
VPS45-202ENST00000369130 CNTNAP5Q8WYK1 1306 aa11.03□□□□□ -0.64
VPS45-202ENST00000369130 MYH10P35580 1976 aa11.03□□□□□ -0.64
VPS45-202ENST00000369130 NCK2O43639 380 aa11.03□□□□□ -0.64
VPS45-202ENST00000369130 ERLIN1O75477 346 aa11.03□□□□□ -0.64
VPS45-202ENST00000369130 CRKLP46109 303 aaKnown RBP11.03□□□□□ -0.64
VPS45-202ENST00000369130 ERFEQ4G0M1 354 aa11.03□□□□□ -0.64
VPS45-202ENST00000369130 CELF1Q92879 486 aaKnown RBP11.03□□□□□ -0.64
VPS45-202ENST00000369130 TNFRSF25Q93038 417 aa11.03□□□□□ -0.64
VPS45-202ENST00000369130 RRP36Q96EU6 259 aaKnown RBP11.03□□□□□ -0.64
VPS45-202ENST00000369130 MLXIPQ9HAP2 919 aa11.03□□□□□ -0.64
VPS45-202ENST00000369130 STX8Q9UNK0 236 aa11.03□□□□□ -0.64
VPS45-202ENST00000369130 TTF2Q9UNY4 1162 aaKnown RBP11.03□□□□□ -0.64
VPS45-202ENST00000369130 TOGARAM1Q9Y4F4 1720 aa11.02□□□□□ -0.64
VPS45-202ENST00000369130 UBR2Q8IWV8 1755 aa11.02□□□□□ -0.64
VPS45-202ENST00000369130 MYO1BO43795 1136 aa11.02□□□□□ -0.64
VPS45-202ENST00000369130 SCG2P13521 617 aa11.02□□□□□ -0.64
VPS45-202ENST00000369130 GGCXP38435 758 aa11.02□□□□□ -0.64
VPS45-202ENST00000369130 NAALADL2Q58DX5 795 aa11.02□□□□□ -0.64
VPS45-202ENST00000369130 TXNRD3Q86VQ6 643 aa11.02□□□□□ -0.64
VPS45-202ENST00000369130 PROCA1Q8NCQ7 364 aaPredicted RBP11.02□□□□□ -0.64
VPS45-202ENST00000369130 EXOC4Q96A65 974 aa11.02□□□□□ -0.64
VPS45-202ENST00000369130 FERMT2Q96AC1 680 aa11.02□□□□□ -0.64
VPS45-202ENST00000369130 FAM207AQ9NSI2 230 aaPredicted RBP11.02□□□□□ -0.64
VPS45-202ENST00000369130 MCM9Q9NXL9 1143 aa11.02□□□□□ -0.64
VPS45-202ENST00000369130 SLAIN2Q9P270 581 aa11.02□□□□□ -0.64
VPS45-202ENST00000369130 SAP30BPQ9UHR5 308 aaKnown RBP11.02□□□□□ -0.64
VPS45-202ENST00000369130 GNAT2P19087 354 aa11.02□□□□□ -0.65
VPS45-202ENST00000369130 AMPD2Q01433 879 aa11.02□□□□□ -0.65
VPS45-202ENST00000369130 APBA1Q02410 837 aa11.02□□□□□ -0.65
VPS45-202ENST00000369130 MECOMQ03112 1051 aa11.02□□□□□ -0.65
VPS45-202ENST00000369130 CCDC152Q4G0S7 254 aa11.02□□□□□ -0.65
VPS45-202ENST00000369130 TMC4Q7Z404 712 aa11.02□□□□□ -0.65
VPS45-202ENST00000369130 DNAAF5Q86Y56 855 aa11.02□□□□□ -0.65
VPS45-202ENST00000369130 MB21D1Q8N884 522 aa11.02□□□□□ -0.65
VPS45-202ENST00000369130 MSANTD4Q8NCY6 345 aa11.02□□□□□ -0.65
VPS45-202ENST00000369130 CCDC148Q8NFR7 591 aa11.02□□□□□ -0.65
VPS45-202ENST00000369130 JAKMIP2Q96AA8 810 aa11.02□□□□□ -0.65
VPS45-202ENST00000369130 NAA15Q9BXJ9 866 aaKnown RBP11.02□□□□□ -0.65
VPS45-202ENST00000369130 LRWD1Q9UFC0 647 aa11.02□□□□□ -0.65
VPS45-202ENST00000369130 LIMA1Q9UHB6 759 aaKnown RBP11.02□□□□□ -0.65
VPS45-202ENST00000369130 RWDD2AQ9UIY3 292 aa11.02□□□□□ -0.65
VPS45-202ENST00000369130 TNS2Q63HR2 1409 aa11.02□□□□□ -0.65
VPS45-202ENST00000369130 COL1A1P02452 1464 aaPredicted RBP11.02□□□□□ -0.65
VPS45-202ENST00000369130 EPHB6O15197 1021 aa11.01□□□□□ -0.65
VPS45-202ENST00000369130 ATP8B1O43520 1251 aa11.01□□□□□ -0.65
VPS45-202ENST00000369130 IDEP14735 1019 aa11.01□□□□□ -0.65
VPS45-202ENST00000369130 NUP98P52948 1817 aa11.01□□□□□ -0.65
VPS45-202ENST00000369130 STK4Q13043 487 aa11.01□□□□□ -0.65
VPS45-202ENST00000369130 ZNF658Q5TYW1 1059 aaPredicted RBP11.01□□□□□ -0.65
VPS45-202ENST00000369130 LRRC31Q6UY01 552 aa11.01□□□□□ -0.65
VPS45-202ENST00000369130 TICAM2Q86XR7 235 aa11.01□□□□□ -0.65
VPS45-202ENST00000369130 CSGALNACT2Q8N6G5 542 aa11.01□□□□□ -0.65
VPS45-202ENST00000369130 RTL9Q8NET4 1388 aa11.01□□□□□ -0.65
VPS45-202ENST00000369130 ANKRD20A12PQ8NF67 263 aa11.01□□□□□ -0.65
VPS45-202ENST00000369130 OR8K1Q8NGG5 319 aa11.01□□□□□ -0.65
VPS45-202ENST00000369130 GOLGA5Q8TBA6 731 aa11.01□□□□□ -0.65
VPS45-202ENST00000369130 SLC39A2Q9NP94 309 aa11.01□□□□□ -0.65
VPS45-202ENST00000369130 RAB21Q9UL25 225 aa11.01□□□□□ -0.65
VPS45-202ENST00000369130 SAR1BQ9Y6B6 198 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms