RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 LRRIQ4A6NIV6 560 aa19.99■□□□□ 0.79
SNX27-202ENST00000368841 H7C1D1 291 aa19.99■□□□□ 0.79
SNX27-202ENST00000368841 AMFRQ9UKV5 643 aa19.99■□□□□ 0.79
SNX27-202ENST00000368841 KCNQ4P56696 695 aa19.99■□□□□ 0.79
SNX27-202ENST00000368841 A2MP01023 1474 aa19.99■□□□□ 0.79
SNX27-202ENST00000368841 FAM182BQ5T319 152 aa19.98■□□□□ 0.79
SNX27-202ENST00000368841 ZSCAN10Q96SZ4 725 aaPredicted RBP19.98■□□□□ 0.79
SNX27-202ENST00000368841 DISC1Q9NRI5 854 aa19.98■□□□□ 0.79
SNX27-202ENST00000368841 MROH5Q6ZUA9 1318 aa19.98■□□□□ 0.79
SNX27-202ENST00000368841 PALM3A6NDB9 673 aaPredicted RBP19.98■□□□□ 0.79
SNX27-202ENST00000368841 TMTC4Q5T4D3 741 aa19.98■□□□□ 0.79
SNX27-202ENST00000368841 LMNTD2Q8IXW0 634 aa19.98■□□□□ 0.79
SNX27-202ENST00000368841 SYCE1Q8N0S2 351 aa19.98■□□□□ 0.79
SNX27-202ENST00000368841 KRIT1O00522 736 aa19.98■□□□□ 0.79
SNX27-202ENST00000368841 DKC1O60832 514 aaKnown RBP eCLIP19.98■□□□□ 0.79
SNX27-202ENST00000368841 CTNNA1P35221 906 aaKnown RBP19.98■□□□□ 0.79
SNX27-202ENST00000368841 FRMD3A2A2Y4 597 aa19.98■□□□□ 0.79
SNX27-202ENST00000368841 STX2P32856 288 aa19.98■□□□□ 0.79
SNX27-202ENST00000368841 PTH1RQ03431 593 aa19.98■□□□□ 0.79
SNX27-202ENST00000368841 P4HA1P13674 534 aa19.97■□□□□ 0.79
SNX27-202ENST00000368841 PRAG1Q86YV5 1406 aa19.97■□□□□ 0.79
SNX27-202ENST00000368841 ANKRD35Q8N283 1001 aa19.97■□□□□ 0.79
SNX27-202ENST00000368841 SEPT9Q9UHD8 586 aaPredicted RBP19.97■□□□□ 0.79
SNX27-202ENST00000368841 MAD1L1Q9Y6D9 718 aa19.97■□□□□ 0.79
SNX27-202ENST00000368841 PPP4R4Q6NUP7 873 aa19.97■□□□□ 0.79
SNX27-202ENST00000368841 KBTBD3Q8NAB2 608 aa19.97■□□□□ 0.79
SNX27-202ENST00000368841 BAIAP2L1Q9UHR4 511 aa19.97■□□□□ 0.79
SNX27-202ENST00000368841 DUOX2Q9NRD8 1548 aa19.97■□□□□ 0.79
SNX27-202ENST00000368841 ASXL2Q76L83 1435 aa19.97■□□□□ 0.79
SNX27-202ENST00000368841 PLCB4Q15147 1175 aa19.97■□□□□ 0.79
SNX27-202ENST00000368841 RBBP5Q15291 538 aaKnown RBP19.97■□□□□ 0.79
SNX27-202ENST00000368841 ZNF654Q8IZM8 581 aa19.97■□□□□ 0.79
SNX27-202ENST00000368841 TRIM56Q9BRZ2 755 aaKnown RBP19.97■□□□□ 0.79
SNX27-202ENST00000368841 MLKLQ8NB16 471 aa19.97■□□□□ 0.79
SNX27-202ENST00000368841 MCUQ8NE86 351 aa19.97■□□□□ 0.79
SNX27-202ENST00000368841 SUDS3Q9H7L9 328 aaPredicted RBP19.97■□□□□ 0.79
SNX27-202ENST00000368841 SNAP25P60880 206 aa19.97■□□□□ 0.79
SNX27-202ENST00000368841 KCTD1Q719H9 257 aa19.97■□□□□ 0.79
SNX27-202ENST00000368841 RRAGDQ9NQL2 400 aaPredicted RBP19.97■□□□□ 0.79
SNX27-202ENST00000368841 TNNC2P02585 160 aa19.97■□□□□ 0.79
SNX27-202ENST00000368841 PFKFB1P16118 471 aa19.97■□□□□ 0.79
SNX27-202ENST00000368841 BTDP43251 543 aa19.97■□□□□ 0.79
SNX27-202ENST00000368841 POLGP54098 1239 aaPredicted RBP19.97■□□□□ 0.79
SNX27-202ENST00000368841 SNX1Q13596 522 aa19.97■□□□□ 0.79
SNX27-202ENST00000368841 CEP128Q6ZU80 1094 aa19.97■□□□□ 0.79
SNX27-202ENST00000368841 PPM1KQ8N3J5 372 aa19.97■□□□□ 0.79
SNX27-202ENST00000368841 XRCC5P13010 732 aaKnown RBP19.96■□□□□ 0.79
SNX27-202ENST00000368841 PPP1R2P41236 205 aa19.96■□□□□ 0.79
SNX27-202ENST00000368841 PAK2Q13177 524 aa19.96■□□□□ 0.79
SNX27-202ENST00000368841 PARD3BQ8TEW8 1205 aa19.96■□□□□ 0.79
SNX27-202ENST00000368841 TEKT1Q969V4 418 aa19.96■□□□□ 0.79
SNX27-202ENST00000368841 CABS1Q96KC9 395 aa19.96■□□□□ 0.79
SNX27-202ENST00000368841 LLPHQ9BRT6 129 aaKnown RBP19.96■□□□□ 0.79
SNX27-202ENST00000368841 RGS16O15492 202 aaPredicted RBP19.96■□□□□ 0.79
SNX27-202ENST00000368841 ABCA10Q8WWZ4 1543 aa19.96■□□□□ 0.79
SNX27-202ENST00000368841 TUBB4AP04350 444 aa19.96■□□□□ 0.79
SNX27-202ENST00000368841 TMOD1P28289 359 aa19.96■□□□□ 0.79
SNX27-202ENST00000368841 LRRC24Q50LG9 513 aa19.96■□□□□ 0.79
SNX27-202ENST00000368841 METTL14Q9HCE5 456 aaKnown RBP19.96■□□□□ 0.79
SNX27-202ENST00000368841 ITSN2Q9NZM3 1697 aa19.96■□□□□ 0.79
SNX27-202ENST00000368841 PDE6CP51160 858 aa19.95■□□□□ 0.79
SNX27-202ENST00000368841 CERKLQ49MI3 558 aaPredicted RBP19.95■□□□□ 0.79
SNX27-202ENST00000368841 A0A0D9SFI3 127 aa19.95■□□□□ 0.78
SNX27-202ENST00000368841 SGSM2O43147 1006 aa19.95■□□□□ 0.78
SNX27-202ENST00000368841 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.95■□□□□ 0.78
SNX27-202ENST00000368841 SULF1Q8IWU6 871 aa19.95■□□□□ 0.78
SNX27-202ENST00000368841 IRAK4Q9NWZ3 460 aa19.95■□□□□ 0.78
SNX27-202ENST00000368841 CLIC4Q9Y696 253 aa19.95■□□□□ 0.78
SNX27-202ENST00000368841 GABPB2Q8TAK5 448 aaPredicted RBP19.95■□□□□ 0.78
SNX27-202ENST00000368841 PLCB1Q9NQ66 1216 aa19.95■□□□□ 0.78
SNX27-202ENST00000368841 RABGAP1Q9Y3P9 1069 aa19.95■□□□□ 0.78
SNX27-202ENST00000368841 KDM2BQ8NHM5 1336 aa19.95■□□□□ 0.78
SNX27-202ENST00000368841 GIGYF1O75420 1035 aaPredicted RBP19.95■□□□□ 0.78
SNX27-202ENST00000368841 ECE1P42892 770 aa19.95■□□□□ 0.78
SNX27-202ENST00000368841 TTLL7Q6ZT98 887 aa19.95■□□□□ 0.78
SNX27-202ENST00000368841 PPP4R1Q8TF05 950 aa19.95■□□□□ 0.78
SNX27-202ENST00000368841 AKT3Q9Y243 479 aa19.95■□□□□ 0.78
SNX27-202ENST00000368841 POLR2MP0CAP2 368 aa19.95■□□□□ 0.78
SNX27-202ENST00000368841 ATL3Q6DD88 541 aa19.95■□□□□ 0.78
SNX27-202ENST00000368841 HDAC11Q96DB2 347 aa19.95■□□□□ 0.78
SNX27-202ENST00000368841 LGSNQ5TDP6 509 aa19.94■□□□□ 0.78
SNX27-202ENST00000368841 TMTC1Q8IUR5 882 aa19.94■□□□□ 0.78
SNX27-202ENST00000368841 IBTKQ9P2D0 1353 aaPredicted RBP19.94■□□□□ 0.78
SNX27-202ENST00000368841 SPDYE2BA6NHP3 402 aa19.94■□□□□ 0.78
SNX27-202ENST00000368841 ZBTB24O43167 697 aaPredicted RBP19.94■□□□□ 0.78
SNX27-202ENST00000368841 SPDYE6P0CI01 402 aa19.94■□□□□ 0.78
SNX27-202ENST00000368841 ANKRD20A3Q5VUR7 823 aa19.94■□□□□ 0.78
SNX27-202ENST00000368841 JADE1Q6IE81 842 aa19.94■□□□□ 0.78
SNX27-202ENST00000368841 TTC30AQ86WT1 665 aa19.94■□□□□ 0.78
SNX27-202ENST00000368841 RASGRP4Q8TDF6 673 aa19.94■□□□□ 0.78
SNX27-202ENST00000368841 IL13P35225 146 aa19.94■□□□□ 0.78
SNX27-202ENST00000368841 GPATCH8Q9UKJ3 1502 aaKnown RBP19.94■□□□□ 0.78
SNX27-202ENST00000368841 PPFIA1Q13136 1202 aa19.94■□□□□ 0.78
SNX27-202ENST00000368841 RAPH1Q70E73 1250 aa19.94■□□□□ 0.78
SNX27-202ENST00000368841 EEPD1Q7L9B9 569 aa19.94■□□□□ 0.78
SNX27-202ENST00000368841 RFX6Q8HWS3 928 aa19.94■□□□□ 0.78
SNX27-202ENST00000368841 ESYT2A0FGR8 921 aa19.94■□□□□ 0.78
SNX27-202ENST00000368841 MYLK4Q86YV6 388 aaPredicted RBP19.94■□□□□ 0.78
SNX27-202ENST00000368841 A0A087WWV3 80 aa19.93■□□□□ 0.78
SNX27-202ENST00000368841 MYOCDQ8IZQ8 938 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 229.9 ms