RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 TMEM106CQ9BVX2 250 aa21.75■■□□□ 1.07
CHTOP-202ENST00000368687 TEX13BQ9BXU2 312 aa21.75■■□□□ 1.07
CHTOP-202ENST00000368687 LSG1Q9H089 658 aaKnown RBP21.75■■□□□ 1.07
CHTOP-202ENST00000368687 SLC5A4Q9NY91 659 aa21.75■■□□□ 1.07
CHTOP-202ENST00000368687 ZSWIM5Q9P217 1185 aa21.75■■□□□ 1.07
CHTOP-202ENST00000368687 KIAA0100Q14667 2235 aaKnown RBP21.74■■□□□ 1.07
CHTOP-202ENST00000368687 TMEM232C9JQI7 657 aa21.74■■□□□ 1.07
CHTOP-202ENST00000368687 CAPN2P17655 700 aa21.74■■□□□ 1.07
CHTOP-202ENST00000368687 STAT3P40763 770 aa21.74■■□□□ 1.07
CHTOP-202ENST00000368687 TMEM132BQ14DG7 1078 aa21.74■■□□□ 1.07
CHTOP-202ENST00000368687 MORN1Q5T089 497 aa21.74■■□□□ 1.07
CHTOP-202ENST00000368687 RIOX2Q8IUF8 465 aa21.74■■□□□ 1.07
CHTOP-202ENST00000368687 KIFC2Q96AC6 838 aa21.74■■□□□ 1.07
CHTOP-202ENST00000368687 KAT14Q9H8E8 782 aa21.74■■□□□ 1.07
CHTOP-202ENST00000368687 BIN2Q9UBW5 565 aaPredicted RBP21.74■■□□□ 1.07
CHTOP-202ENST00000368687 ZNF214Q9UL59 606 aaPredicted RBP21.74■■□□□ 1.07
CHTOP-202ENST00000368687 ERICH2A1L162 156 aa21.73■■□□□ 1.07
CHTOP-202ENST00000368687 HMGCRP04035 888 aa21.73■■□□□ 1.07
CHTOP-202ENST00000368687 ERCC3P19447 782 aa21.73■■□□□ 1.07
CHTOP-202ENST00000368687 PTPREP23469 700 aa21.73■■□□□ 1.07
CHTOP-202ENST00000368687 MAP2K5Q13163 448 aa21.73■■□□□ 1.07
CHTOP-202ENST00000368687 GRB14Q14449 540 aa21.73■■□□□ 1.07
CHTOP-202ENST00000368687 CCDC96Q2M329 555 aa21.73■■□□□ 1.07
CHTOP-202ENST00000368687 GPATCH4Q5T3I0 446 aaKnown RBP21.73■■□□□ 1.07
CHTOP-202ENST00000368687 NCAPG2Q86XI2 1143 aa21.73■■□□□ 1.07
CHTOP-202ENST00000368687 SLC38A10Q9HBR0 1119 aa21.73■■□□□ 1.07
CHTOP-202ENST00000368687 PNMA2Q9UL42 364 aa21.73■■□□□ 1.07
CHTOP-202ENST00000368687 TNKSO95271 1327 aa21.73■■□□□ 1.07
CHTOP-202ENST00000368687 PEX10O60683 326 aa21.72■■□□□ 1.07
CHTOP-202ENST00000368687 REPS2Q8NFH8 660 aa21.72■■□□□ 1.07
CHTOP-202ENST00000368687 USP6NLQ92738 828 aa21.72■■□□□ 1.07
CHTOP-202ENST00000368687 MTA3Q9BTC8 594 aa21.72■■□□□ 1.07
CHTOP-202ENST00000368687 E7EWF7 191 aa21.71■■□□□ 1.07
CHTOP-202ENST00000368687 MYCP01106 439 aaPredicted RBP21.71■■□□□ 1.07
CHTOP-202ENST00000368687 HOXC6P09630 235 aa21.71■■□□□ 1.07
CHTOP-202ENST00000368687 PDHBP11177 359 aa21.71■■□□□ 1.07
CHTOP-202ENST00000368687 FCER1AP12319 257 aa21.71■■□□□ 1.07
CHTOP-202ENST00000368687 IFIT1BQ5T764 474 aaKnown RBP21.71■■□□□ 1.07
CHTOP-202ENST00000368687 ENAHQ8N8S7 591 aaPredicted RBP21.71■■□□□ 1.07
CHTOP-202ENST00000368687 PNMA1Q8ND90 353 aa21.71■■□□□ 1.07
CHTOP-202ENST00000368687 ZKSCAN3Q9BRR0 538 aa21.71■■□□□ 1.07
CHTOP-202ENST00000368687 FBXO40Q9UH90 709 aa21.71■■□□□ 1.07
CHTOP-202ENST00000368687 REC8O95072 547 aa21.7■■□□□ 1.06
CHTOP-202ENST00000368687 SNHG28P0DPA3 235 aa21.7■■□□□ 1.06
CHTOP-202ENST00000368687 ZKSCAN1P17029 563 aaPredicted RBP21.7■■□□□ 1.06
CHTOP-202ENST00000368687 SNRNP48Q6IEG0 339 aaKnown RBP21.7■■□□□ 1.06
CHTOP-202ENST00000368687 BTNL9Q6UXG8 535 aa21.7■■□□□ 1.06
CHTOP-202ENST00000368687 KCTD1Q719H9 257 aa21.7■■□□□ 1.06
CHTOP-202ENST00000368687 NKX2-3Q8TAU0 364 aa21.7■■□□□ 1.06
CHTOP-202ENST00000368687 INHAP05111 366 aa21.69■■□□□ 1.06
CHTOP-202ENST00000368687 ELNP15502 786 aa21.69■■□□□ 1.06
CHTOP-202ENST00000368687 EN2P19622 333 aaPredicted RBP21.69■■□□□ 1.06
CHTOP-202ENST00000368687 CYP2B6P20813 491 aa21.69■■□□□ 1.06
CHTOP-202ENST00000368687 KCTD2Q14681 263 aa21.69■■□□□ 1.06
CHTOP-202ENST00000368687 NECTIN1Q15223 517 aa21.69■■□□□ 1.06
CHTOP-202ENST00000368687 EPB41L2O43491 1005 aaKnown RBP21.68■■□□□ 1.06
CHTOP-202ENST00000368687 ADORA2AP29274 412 aa21.68■■□□□ 1.06
CHTOP-202ENST00000368687 ZNF543Q08ER8 600 aa21.68■■□□□ 1.06
CHTOP-202ENST00000368687 TKFCQ3LXA3 575 aa21.68■■□□□ 1.06
CHTOP-202ENST00000368687 ASPRV1Q53RT3 343 aa21.68■■□□□ 1.06
CHTOP-202ENST00000368687 CREB3L3Q68CJ9 461 aa21.68■■□□□ 1.06
CHTOP-202ENST00000368687 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.68■■□□□ 1.06
CHTOP-202ENST00000368687 DPP9Q86TI2 863 aa21.68■■□□□ 1.06
CHTOP-202ENST00000368687 CHST13Q8NET6 341 aa21.68■■□□□ 1.06
CHTOP-202ENST00000368687 MTMR7Q9Y216 660 aa21.68■■□□□ 1.06
CHTOP-202ENST00000368687 ZNFX1Q9P2E3 1918 aaKnown RBP21.67■■□□□ 1.06
CHTOP-202ENST00000368687 SLC27A2O14975 620 aa21.67■■□□□ 1.06
CHTOP-202ENST00000368687 MMP19Q99542 508 aa21.67■■□□□ 1.06
CHTOP-202ENST00000368687 PRR12Q9ULL5 1215 aa21.67■■□□□ 1.06
CHTOP-202ENST00000368687 PDE4DIPQ5VU43 2346 aa21.67■■□□□ 1.06
CHTOP-202ENST00000368687 IFIT3O14879 490 aaKnown RBP21.66■■□□□ 1.06
CHTOP-202ENST00000368687 EIF5BO60841 1220 aaKnown RBP21.66■■□□□ 1.06
CHTOP-202ENST00000368687 CCL5P13501 91 aa21.66■■□□□ 1.06
CHTOP-202ENST00000368687 MCM5P33992 734 aa21.66■■□□□ 1.06
CHTOP-202ENST00000368687 KRT32Q14532 448 aa21.66■■□□□ 1.06
CHTOP-202ENST00000368687 MTFR1Q15390 333 aa21.66■■□□□ 1.06
CHTOP-202ENST00000368687 SEC23AQ15436 765 aa21.66■■□□□ 1.06
CHTOP-202ENST00000368687 SYDE2Q5VT97 1194 aa21.66■■□□□ 1.06
CHTOP-202ENST00000368687 MFSD14CQ5VZR4 134 aa21.66■■□□□ 1.06
CHTOP-202ENST00000368687 OLFML2BQ68BL8 750 aa21.66■■□□□ 1.06
CHTOP-202ENST00000368687 CYB5R4Q7L1T6 521 aa21.66■■□□□ 1.06
CHTOP-202ENST00000368687 CPXCR1Q8N123 301 aa21.66■■□□□ 1.06
CHTOP-202ENST00000368687 TRIB2Q92519 343 aa21.66■■□□□ 1.06
CHTOP-202ENST00000368687 RNF208Q9H0X6 261 aa21.66■■□□□ 1.06
CHTOP-202ENST00000368687 DIS3Q9Y2L1 958 aaKnown RBP21.66■■□□□ 1.06
CHTOP-202ENST00000368687 GJB1P08034 283 aa21.65■■□□□ 1.06
CHTOP-202ENST00000368687 WTAPQ15007 396 aa21.65■■□□□ 1.06
CHTOP-202ENST00000368687 STOX1Q6ZVD7 989 aa21.65■■□□□ 1.06
CHTOP-202ENST00000368687 MB21D2Q8IYB1 491 aaPredicted RBP21.65■■□□□ 1.06
CHTOP-202ENST00000368687 TMTC2Q8N394 836 aa21.65■■□□□ 1.06
CHTOP-202ENST00000368687 RANBP17Q9H2T7 1088 aaKnown RBP21.65■■□□□ 1.06
CHTOP-202ENST00000368687 RAVER2Q9HCJ3 691 aaKnown RBP21.65■■□□□ 1.06
CHTOP-202ENST00000368687 FRMPD2Q68DX3 1309 aaPredicted RBP21.64■■□□□ 1.05
CHTOP-202ENST00000368687 RPTORQ8N122 1335 aa21.64■■□□□ 1.05
CHTOP-202ENST00000368687 PARP1P09874 1014 aaKnown RBP21.64■■□□□ 1.05
CHTOP-202ENST00000368687 TSGA10IPQ3SY00 556 aa21.64■■□□□ 1.05
CHTOP-202ENST00000368687 TMEM87BQ96K49 555 aa21.64■■□□□ 1.05
CHTOP-202ENST00000368687 HMX1Q9NP08 348 aaPredicted RBP21.64■■□□□ 1.05
CHTOP-202ENST00000368687 PLXNA1Q9UIW2 1896 aa21.64■■□□□ 1.05
CHTOP-202ENST00000368687 ICAM1P05362 532 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms