RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 ZMYM1Q5SVZ6 1142 aa19.1■□□□□ 0.65
CKS1B-202ENST00000368436 SNRNP48Q6IEG0 339 aaKnown RBP19.1■□□□□ 0.65
CKS1B-202ENST00000368436 Q7L0L9 218 aa19.1■□□□□ 0.65
CKS1B-202ENST00000368436 MSL3Q8N5Y2 521 aaKnown RBP19.1■□□□□ 0.65
CKS1B-202ENST00000368436 NEDD1Q8NHV4 660 aa19.1■□□□□ 0.65
CKS1B-202ENST00000368436 NACAP1Q9BZK3 213 aa19.1■□□□□ 0.65
CKS1B-202ENST00000368436 XPNPEP3Q9NQH7 507 aa19.1■□□□□ 0.65
CKS1B-202ENST00000368436 PHF24Q9UPV7 400 aa19.1■□□□□ 0.65
CKS1B-202ENST00000368436 TTLL1O95922 423 aa19.09■□□□□ 0.65
CKS1B-202ENST00000368436 MYCNP04198 464 aaPredicted RBP19.09■□□□□ 0.65
CKS1B-202ENST00000368436 TRIM60Q495X7 471 aa19.09■□□□□ 0.65
CKS1B-202ENST00000368436 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.09■□□□□ 0.65
CKS1B-202ENST00000368436 GMCL1P1Q8NEA9 526 aa19.09■□□□□ 0.65
CKS1B-202ENST00000368436 SLC38A10Q9HBR0 1119 aa19.09■□□□□ 0.65
CKS1B-202ENST00000368436 MTMR10Q9NXD2 777 aa19.09■□□□□ 0.65
CKS1B-202ENST00000368436 FEM1BQ9UK73 627 aa19.09■□□□□ 0.65
CKS1B-202ENST00000368436 SALL3Q9BXA9 1300 aa19.08■□□□□ 0.65
CKS1B-202ENST00000368436 ZBED4O75132 1171 aa19.08■□□□□ 0.64
CKS1B-202ENST00000368436 AKR1A1P14550 325 aa19.08■□□□□ 0.64
CKS1B-202ENST00000368436 MAMDC4Q6UXC1 1216 aa19.08■□□□□ 0.64
CKS1B-202ENST00000368436 RNF180Q86T96 592 aa19.08■□□□□ 0.64
CKS1B-202ENST00000368436 FERMT2Q96AC1 680 aa19.08■□□□□ 0.64
CKS1B-202ENST00000368436 FSD1Q9BTV5 496 aa19.08■□□□□ 0.64
CKS1B-202ENST00000368436 SYNGAP1Q96PV0 1343 aa19.07■□□□□ 0.64
CKS1B-202ENST00000368436 PGK1P00558 417 aa19.07■□□□□ 0.64
CKS1B-202ENST00000368436 MX1P20591 662 aa19.07■□□□□ 0.64
CKS1B-202ENST00000368436 OAZ1P54368 228 aa19.07■□□□□ 0.64
CKS1B-202ENST00000368436 PDE4BQ07343 736 aa19.07■□□□□ 0.64
CKS1B-202ENST00000368436 ZNF467Q7Z7K2 595 aaPredicted RBP19.07■□□□□ 0.64
CKS1B-202ENST00000368436 CPXCR1Q8N123 301 aa19.07■□□□□ 0.64
CKS1B-202ENST00000368436 LRRC47Q8N1G4 583 aaKnown RBP19.07■□□□□ 0.64
CKS1B-202ENST00000368436 KIFC2Q96AC6 838 aa19.07■□□□□ 0.64
CKS1B-202ENST00000368436 DDX11Q96FC9 970 aa19.07■□□□□ 0.64
CKS1B-202ENST00000368436 NAPBQ9H115 298 aa19.07■□□□□ 0.64
CKS1B-202ENST00000368436 CNPY2Q9Y2B0 182 aa19.07■□□□□ 0.64
CKS1B-202ENST00000368436 MCM3APO60318 1980 aa19.06■□□□□ 0.64
CKS1B-202ENST00000368436 POTEB2H3BUK9 544 aa19.06■□□□□ 0.64
CKS1B-202ENST00000368436 ADAMTS4O75173 837 aa19.06■□□□□ 0.64
CKS1B-202ENST00000368436 SNAI1O95863 264 aaPredicted RBP19.06■□□□□ 0.64
CKS1B-202ENST00000368436 SLC3A2P08195 630 aaKnown RBP19.06■□□□□ 0.64
CKS1B-202ENST00000368436 TSPY3P0CV98 308 aa19.06■□□□□ 0.64
CKS1B-202ENST00000368436 TSPY8P0CW00 308 aa19.06■□□□□ 0.64
CKS1B-202ENST00000368436 TFAP4Q01664 338 aa19.06■□□□□ 0.64
CKS1B-202ENST00000368436 PPARAQ07869 468 aa19.06■□□□□ 0.64
CKS1B-202ENST00000368436 SLFN13Q68D06 897 aa19.06■□□□□ 0.64
CKS1B-202ENST00000368436 FAM109BQ6ICB4 259 aaPredicted RBP19.06■□□□□ 0.64
CKS1B-202ENST00000368436 SLC17A8Q8NDX2 589 aa19.06■□□□□ 0.64
CKS1B-202ENST00000368436 RAVER2Q9HCJ3 691 aaKnown RBP19.06■□□□□ 0.64
CKS1B-202ENST00000368436 PDLIM7Q9NR12 457 aa19.06■□□□□ 0.64
CKS1B-202ENST00000368436 STXBP5LQ9Y2K9 1186 aa19.06■□□□□ 0.64
CKS1B-202ENST00000368436 FOXP2O15409 715 aa19.05■□□□□ 0.64
CKS1B-202ENST00000368436 FDX1P10109 184 aa19.05■□□□□ 0.64
CKS1B-202ENST00000368436 BMP3P12645 472 aa19.05■□□□□ 0.64
CKS1B-202ENST00000368436 TLE2Q04725 743 aa19.05■□□□□ 0.64
CKS1B-202ENST00000368436 SH3RF1Q7Z6J0 888 aa19.05■□□□□ 0.64
CKS1B-202ENST00000368436 CHST13Q8NET6 341 aa19.05■□□□□ 0.64
CKS1B-202ENST00000368436 TSEN34Q9BSV6 310 aaKnown RBP19.05■□□□□ 0.64
CKS1B-202ENST00000368436 PRDM5Q9NQX1 630 aaPredicted RBP19.05■□□□□ 0.64
CKS1B-202ENST00000368436 CTDP1Q9Y5B0 961 aaPredicted RBP19.05■□□□□ 0.64
CKS1B-202ENST00000368436 TRIM43BA6NCK2 446 aa19.04■□□□□ 0.64
CKS1B-202ENST00000368436 KLHDC9Q8NEP7 349 aa19.04■□□□□ 0.64
CKS1B-202ENST00000368436 BADQ92934 168 aa19.04■□□□□ 0.64
CKS1B-202ENST00000368436 TRIM43Q96BQ3 446 aaPredicted RBP19.04■□□□□ 0.64
CKS1B-202ENST00000368436 LENG1Q96BZ8 264 aaPredicted RBP19.04■□□□□ 0.64
CKS1B-202ENST00000368436 FBXO40Q9UH90 709 aa19.04■□□□□ 0.64
CKS1B-202ENST00000368436 FAM184BQ9ULE4 1060 aa19.04■□□□□ 0.64
CKS1B-202ENST00000368436 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.04■□□□□ 0.64
CKS1B-202ENST00000368436 SYNRGQ9UMZ2 1314 aa19.03■□□□□ 0.64
CKS1B-202ENST00000368436 COL6A3P12111 3177 aa19.03■□□□□ 0.64
CKS1B-202ENST00000368436 A0A1W2PQ45 241 aaPredicted RBP19.03■□□□□ 0.64
CKS1B-202ENST00000368436 A0A1W2PQY0 241 aa19.03■□□□□ 0.64
CKS1B-202ENST00000368436 SLC4A3P48751 1232 aa19.03■□□□□ 0.64
CKS1B-202ENST00000368436 RRP1P56182 461 aaKnown RBP19.03■□□□□ 0.64
CKS1B-202ENST00000368436 SHHQ15465 462 aa19.03■□□□□ 0.64
CKS1B-202ENST00000368436 CCSAPQ6IQ19 270 aaPredicted RBP19.03■□□□□ 0.64
CKS1B-202ENST00000368436 ANKRD35Q8N283 1001 aa19.03■□□□□ 0.64
CKS1B-202ENST00000368436 GMCL1Q96IK5 515 aa19.03■□□□□ 0.64
CKS1B-202ENST00000368436 FGD4Q96M96 766 aa19.03■□□□□ 0.64
CKS1B-202ENST00000368436 TACC3Q9Y6A5 838 aa19.03■□□□□ 0.64
CKS1B-202ENST00000368436 TMEM232C9JQI7 657 aa19.02■□□□□ 0.64
CKS1B-202ENST00000368436 DUSP11O75319 330 aaKnown RBP19.02■□□□□ 0.64
CKS1B-202ENST00000368436 STAT2P52630 851 aa19.02■□□□□ 0.64
CKS1B-202ENST00000368436 ACLYP53396 1101 aa19.02■□□□□ 0.64
CKS1B-202ENST00000368436 ACVR2BQ13705 512 aa19.02■□□□□ 0.64
CKS1B-202ENST00000368436 PPP4R3BQ5MIZ7 849 aa19.02■□□□□ 0.64
CKS1B-202ENST00000368436 C9orf50Q5SZB4 431 aa19.02■□□□□ 0.64
CKS1B-202ENST00000368436 CCDC129Q6ZRS4 1044 aa19.02■□□□□ 0.64
CKS1B-202ENST00000368436 FAM160B2Q86V87 743 aa19.02■□□□□ 0.64
CKS1B-202ENST00000368436 CHURC1Q8WUH1 139 aa19.02■□□□□ 0.64
CKS1B-202ENST00000368436 STAG1Q8WVM7 1258 aa19.02■□□□□ 0.64
CKS1B-202ENST00000368436 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.02■□□□□ 0.64
CKS1B-202ENST00000368436 MOXD2PA6NHM9 499 aa19.01■□□□□ 0.63
CKS1B-202ENST00000368436 KIAA0355O15063 1070 aa19.01■□□□□ 0.63
CKS1B-202ENST00000368436 PLA2G6O60733 806 aa19.01■□□□□ 0.63
CKS1B-202ENST00000368436 CLTBP09497 229 aa19.01■□□□□ 0.63
CKS1B-202ENST00000368436 ANKRD45Q5TZF3 282 aa19.01■□□□□ 0.63
CKS1B-202ENST00000368436 PIAS4Q8N2W9 510 aaPredicted RBP19.01■□□□□ 0.63
CKS1B-202ENST00000368436 EVI5LQ96CN4 794 aa19.01■□□□□ 0.63
CKS1B-202ENST00000368436 ABHD16BQ9H3Z7 469 aa19.01■□□□□ 0.63
CKS1B-202ENST00000368436 INCENPQ9NQS7 918 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms