RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 SV2BQ7L1I2 683 aa9.31□□□□□ -0.92
SSR2-202ENST00000368311 PNMA1Q8ND90 353 aa9.31□□□□□ -0.92
SSR2-202ENST00000368311 CELF1Q92879 486 aaKnown RBP9.31□□□□□ -0.92
SSR2-202ENST00000368311 PGBD4Q96DM1 585 aa9.31□□□□□ -0.92
SSR2-202ENST00000368311 SSX2IPQ9Y2D8 614 aa9.31□□□□□ -0.92
SSR2-202ENST00000368311 PPME1Q9Y570 386 aa9.31□□□□□ -0.92
SSR2-202ENST00000368311 PHKA1P46020 1223 aa9.31□□□□□ -0.92
SSR2-202ENST00000368311 TRPC3Q13507 836 aa9.31□□□□□ -0.92
SSR2-202ENST00000368311 CCDC83Q8IWF9 413 aa9.31□□□□□ -0.92
SSR2-202ENST00000368311 DPF3Q92784 378 aa9.31□□□□□ -0.92
SSR2-202ENST00000368311 TEX13BQ9BXU2 312 aa9.31□□□□□ -0.92
SSR2-202ENST00000368311 TBC1D22BQ9NU19 505 aa9.31□□□□□ -0.92
SSR2-202ENST00000368311 NYAP2Q9P242 653 aa9.31□□□□□ -0.92
SSR2-202ENST00000368311 WDR19Q8NEZ3 1342 aa9.31□□□□□ -0.92
SSR2-202ENST00000368311 STAT3P40763 770 aa9.31□□□□□ -0.92
SSR2-202ENST00000368311 CREB3L3Q68CJ9 461 aa9.31□□□□□ -0.92
SSR2-202ENST00000368311 TDRD3Q9H7E2 651 aaKnown RBP9.31□□□□□ -0.92
SSR2-202ENST00000368311 COL1A1P02452 1464 aaPredicted RBP9.31□□□□□ -0.92
SSR2-202ENST00000368311 TYW5A2RUC4 315 aaKnown RBP9.31□□□□□ -0.92
SSR2-202ENST00000368311 CCDC192P0DO97 292 aa9.31□□□□□ -0.92
SSR2-202ENST00000368311 GPR101Q96P66 508 aaPredicted RBP9.31□□□□□ -0.92
SSR2-202ENST00000368311 HOMER2Q9NSB8 354 aa9.31□□□□□ -0.92
SSR2-202ENST00000368311 GPRC5DQ9NZD1 345 aa9.31□□□□□ -0.92
SSR2-202ENST00000368311 SFSWAPQ12872 951 aaKnown RBP9.3□□□□□ -0.92
SSR2-202ENST00000368311 GLT1D1Q96MS3 346 aa9.3□□□□□ -0.92
SSR2-202ENST00000368311 ZDHHC15Q96MV8 337 aa9.3□□□□□ -0.92
SSR2-202ENST00000368311 EHD4Q9H223 541 aa9.3□□□□□ -0.92
SSR2-202ENST00000368311 RRN3P2A6NIE6 340 aa9.3□□□□□ -0.92
SSR2-202ENST00000368311 GH1P01241 217 aa9.3□□□□□ -0.92
SSR2-202ENST00000368311 CCT6AP40227 531 aaKnown RBP9.3□□□□□ -0.92
SSR2-202ENST00000368311 RRAGBQ5VZM2 374 aa9.3□□□□□ -0.92
SSR2-202ENST00000368311 KCTD17Q8N5Z5 321 aa9.3□□□□□ -0.92
SSR2-202ENST00000368311 CACTINQ8WUQ7 758 aaKnown RBP9.3□□□□□ -0.92
SSR2-202ENST00000368311 MSRAQ9UJ68 235 aa9.3□□□□□ -0.92
SSR2-202ENST00000368311 SETD1AO15047 1707 aaKnown RBP9.3□□□□□ -0.92
SSR2-202ENST00000368311 N4BP1O75113 896 aaKnown RBP9.3□□□□□ -0.92
SSR2-202ENST00000368311 KRT10P13645 584 aa9.3□□□□□ -0.92
SSR2-202ENST00000368311 TRAPPC10P48553 1259 aa9.3□□□□□ -0.92
SSR2-202ENST00000368311 Q6ZUG5 572 aa9.3□□□□□ -0.92
SSR2-202ENST00000368311 KIFAP3Q92845 792 aa9.3□□□□□ -0.92
SSR2-202ENST00000368311 C2orf40Q9H1Z8 148 aa9.3□□□□□ -0.92
SSR2-202ENST00000368311 PNMA6FA0A0J9YX94 578 aa9.3□□□□□ -0.92
SSR2-202ENST00000368311 MAFGO15525 162 aa9.3□□□□□ -0.92
SSR2-202ENST00000368311 ELF1P32519 619 aa9.3□□□□□ -0.92
SSR2-202ENST00000368311 KRT24Q2M2I5 525 aa9.3□□□□□ -0.92
SSR2-202ENST00000368311 SMC5Q8IY18 1101 aa9.3□□□□□ -0.92
SSR2-202ENST00000368311 SLAIN1Q8ND83 568 aa9.3□□□□□ -0.92
SSR2-202ENST00000368311 GABPB2Q8TAK5 448 aaPredicted RBP9.3□□□□□ -0.92
SSR2-202ENST00000368311 SLC7A3Q8WY07 619 aa9.3□□□□□ -0.92
SSR2-202ENST00000368311 CTAGE1Q96RT6 745 aa9.3□□□□□ -0.92
SSR2-202ENST00000368311 SYNCQ9H7C4 482 aa9.3□□□□□ -0.92
SSR2-202ENST00000368311 CDK8P49336 464 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 PPM1FP49593 454 aaPredicted RBP9.29□□□□□ -0.92
SSR2-202ENST00000368311 OAZ1P54368 228 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 KRT76Q01546 638 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 KIAA1841Q6NSI8 718 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 BRF1Q92994 677 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 CCDC94Q9BW85 323 aaPredicted RBP9.29□□□□□ -0.92
SSR2-202ENST00000368311 TM6SF1Q9BZW5 370 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 LOC102724159A0A0B4J2E5 919 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 ZNF233A6NK53 670 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 TNNC2P02585 160 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 PTPREP23469 700 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 TM4SF1P30408 202 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 PWP2Q15269 919 aaKnown RBP9.29□□□□□ -0.92
SSR2-202ENST00000368311 ALX1Q15699 326 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 RABL6Q3YEC7 729 aaPredicted RBP9.29□□□□□ -0.92
SSR2-202ENST00000368311 LRRC24Q50LG9 513 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 ZMYM1Q5SVZ6 1142 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 RUFY3Q7L099 469 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 PLA2G4DQ86XP0 818 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 IQCDQ96DY2 449 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 FAM205AQ6ZU69 1335 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 ZBBXA8MT70 800 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 IL1R1P14778 569 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 SFPQP23246 707 aaKnown RBP eCLIP9.29□□□□□ -0.92
SSR2-202ENST00000368311 TTC39CQ8N584 583 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 TNMDQ9H2S6 317 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 HMX1Q9NP08 348 aaPredicted RBP9.29□□□□□ -0.92
SSR2-202ENST00000368311 DDX19AQ9NUU7 478 aaKnown RBP9.29□□□□□ -0.92
SSR2-202ENST00000368311 PCDHB13Q9Y5F0 798 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 M0R2C6 588 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 PSMA7O14818 248 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 RNASELQ05823 741 aaKnown RBP9.29□□□□□ -0.92
SSR2-202ENST00000368311 USH1GQ495M9 461 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 CNNM3Q8NE01 707 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 CDCA5Q96FF9 252 aa9.29□□□□□ -0.92
SSR2-202ENST00000368311 CALCRLQ16602 461 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 ZNF827Q17R98 1081 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 SPDYE2Q495Y8 402 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 SBK1Q52WX2 424 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 ANO10Q9NW15 660 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 CAMTA1Q9Y6Y1 1673 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 SPDYE2BA6NHP3 402 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 KLRF2D3W0D1 207 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 SPDYE6P0CI01 402 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 POLGP54098 1239 aaPredicted RBP9.28□□□□□ -0.92
SSR2-202ENST00000368311 RASSF7Q02833 373 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 PROSER3Q2NL68 480 aa9.28□□□□□ -0.92
SSR2-202ENST00000368311 SNRNP48Q6IEG0 339 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms