RNA–Protein interactions for RNA: ENST00000368300.8

LMNA-206, Transcript of lamin A/C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNA, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-206ENST00000368300 LAMB1P07942 1786 aa13.99□□□□□ -0.17
LMNA-206ENST00000368300 ZSCAN20P17040 1043 aaPredicted RBP13.99□□□□□ -0.17
LMNA-206ENST00000368300 KARSQ15046 597 aaKnown RBP13.99□□□□□ -0.17
LMNA-206ENST00000368300 SHROOM1Q2M3G4 852 aaPredicted RBP13.99□□□□□ -0.17
LMNA-206ENST00000368300 CCDC178Q5BJE1 867 aa13.99□□□□□ -0.17
LMNA-206ENST00000368300 NT5DC1Q5TFE4 455 aa13.99□□□□□ -0.17
LMNA-206ENST00000368300 CDC42EP5Q6NZY7 148 aa13.99□□□□□ -0.17
LMNA-206ENST00000368300 C4orf32Q8N8J7 132 aa13.99□□□□□ -0.17
LMNA-206ENST00000368300 BMP15O95972 392 aa13.98□□□□□ -0.17
LMNA-206ENST00000368300 TOP1P11387 765 aaKnown RBP13.98□□□□□ -0.17
LMNA-206ENST00000368300 TNNT1P13805 278 aa13.98□□□□□ -0.17
LMNA-206ENST00000368300 ALDH1B1P30837 517 aa13.98□□□□□ -0.17
LMNA-206ENST00000368300 KANK3Q6NY19 840 aa13.98□□□□□ -0.17
LMNA-206ENST00000368300 MTRQ99707 1265 aa13.98□□□□□ -0.17
LMNA-206ENST00000368300 INTS13Q9NVM9 706 aa13.98□□□□□ -0.17
LMNA-206ENST00000368300 MPHOSPH10O00566 681 aaKnown RBP13.98□□□□□ -0.17
LMNA-206ENST00000368300 PLSCR1O15162 318 aa13.98□□□□□ -0.17
LMNA-206ENST00000368300 RAD21O60216 631 aa13.98□□□□□ -0.17
LMNA-206ENST00000368300 PDE6BP35913 854 aa13.98□□□□□ -0.17
LMNA-206ENST00000368300 ZNF771Q7L3S4 317 aaPredicted RBP13.98□□□□□ -0.17
LMNA-206ENST00000368300 C2CD5Q86YS7 1000 aa13.98□□□□□ -0.17
LMNA-206ENST00000368300 MLKLQ8NB16 471 aa13.98□□□□□ -0.17
LMNA-206ENST00000368300 MASTLQ96GX5 879 aa13.98□□□□□ -0.17
LMNA-206ENST00000368300 OSBPL5Q9H0X9 879 aaPredicted RBP13.98□□□□□ -0.17
LMNA-206ENST00000368300 TMX4Q9H1E5 349 aaPredicted RBP13.98□□□□□ -0.17
LMNA-206ENST00000368300 SMCO2A6NFE2 343 aa13.97□□□□□ -0.17
LMNA-206ENST00000368300 M0R2N6 131 aa13.97□□□□□ -0.17
LMNA-206ENST00000368300 RIOK3O14730 519 aaKnown RBP13.97□□□□□ -0.17
LMNA-206ENST00000368300 RBM5P52756 815 aaKnown RBP eCLIP13.97□□□□□ -0.17
LMNA-206ENST00000368300 APOBEC3HQ6NTF7 200 aaKnown RBP13.97□□□□□ -0.17
LMNA-206ENST00000368300 TMC4Q7Z404 712 aa13.97□□□□□ -0.17
LMNA-206ENST00000368300 MAPK8IP1Q9UQF2 711 aa13.97□□□□□ -0.17
LMNA-206ENST00000368300 DLEC1Q9Y238 1755 aa13.97□□□□□ -0.17
LMNA-206ENST00000368300 TRAPPC10P48553 1259 aa13.97□□□□□ -0.17
LMNA-206ENST00000368300 CUL4BQ13620 913 aa13.97□□□□□ -0.17
LMNA-206ENST00000368300 LETM2Q2VYF4 491 aa13.97□□□□□ -0.17
LMNA-206ENST00000368300 JAKMIP3Q5VZ66 844 aa13.97□□□□□ -0.17
LMNA-206ENST00000368300 SH3RF1Q7Z6J0 888 aa13.97□□□□□ -0.17
LMNA-206ENST00000368300 ELOA2Q8IYF1 753 aaPredicted RBP13.97□□□□□ -0.17
LMNA-206ENST00000368300 MYRIPQ8NFW9 859 aa13.97□□□□□ -0.17
LMNA-206ENST00000368300 SPATA20Q8TB22 786 aa13.97□□□□□ -0.17
LMNA-206ENST00000368300 COA7Q96BR5 231 aa13.97□□□□□ -0.17
LMNA-206ENST00000368300 SH3GLB2Q9NR46 395 aa13.97□□□□□ -0.17
LMNA-206ENST00000368300 MTMR4Q9NYA4 1195 aa13.97□□□□□ -0.17
LMNA-206ENST00000368300 BIN2Q9UBW5 565 aaPredicted RBP13.97□□□□□ -0.17
LMNA-206ENST00000368300 SFPQP23246 707 aaKnown RBP eCLIP13.97□□□□□ -0.17
LMNA-206ENST00000368300 DPYDQ12882 1025 aa13.97□□□□□ -0.17
LMNA-206ENST00000368300 RASSF8Q8NHQ8 419 aa13.97□□□□□ -0.17
LMNA-206ENST00000368300 TRERF1Q96PN7 1200 aa13.97□□□□□ -0.17
LMNA-206ENST00000368300 TMEM260Q9NX78 707 aa13.97□□□□□ -0.17
LMNA-206ENST00000368300 PDHBP11177 359 aa13.96□□□□□ -0.17
LMNA-206ENST00000368300 GSDMDP57764 484 aa13.96□□□□□ -0.17
LMNA-206ENST00000368300 GABPAQ06546 454 aa13.96□□□□□ -0.17
LMNA-206ENST00000368300 E2F4Q16254 413 aa13.96□□□□□ -0.17
LMNA-206ENST00000368300 IQUBQ8NA54 791 aa13.96□□□□□ -0.17
LMNA-206ENST00000368300 RRP36Q96EU6 259 aaKnown RBP13.96□□□□□ -0.17
LMNA-206ENST00000368300 SLC16A2P36021 539 aa13.96□□□□□ -0.17
LMNA-206ENST00000368300 TTBK2Q6IQ55 1244 aa13.96□□□□□ -0.17
LMNA-206ENST00000368300 IMPACTQ9P2X3 320 aa13.96□□□□□ -0.17
LMNA-206ENST00000368300 SERPINB13Q9UIV8 391 aa13.96□□□□□ -0.17
LMNA-206ENST00000368300 NEMFO60524 1076 aa13.95□□□□□ -0.18
LMNA-206ENST00000368300 CCDC148Q8NFR7 591 aa13.95□□□□□ -0.18
LMNA-206ENST00000368300 TEKT1Q969V4 418 aa13.95□□□□□ -0.18
LMNA-206ENST00000368300 PRIMPOLQ96LW4 560 aa13.95□□□□□ -0.18
LMNA-206ENST00000368300 SEC63Q9UGP8 760 aaKnown RBP13.95□□□□□ -0.18
LMNA-206ENST00000368300 NAV1Q8NEY1 1877 aa13.95□□□□□ -0.18
LMNA-206ENST00000368300 CCNT1O60563 726 aaKnown RBP13.95□□□□□ -0.18
LMNA-206ENST00000368300 CRKP46108 304 aa13.95□□□□□ -0.18
LMNA-206ENST00000368300 PDXDC2PQ6P474 469 aa13.95□□□□□ -0.18
LMNA-206ENST00000368300 DTHD1Q6ZMT9 781 aa13.95□□□□□ -0.18
LMNA-206ENST00000368300 CREBRFQ8IUR6 639 aa13.95□□□□□ -0.18
LMNA-206ENST00000368300 ENOX1Q8TC92 643 aaKnown RBP13.95□□□□□ -0.18
LMNA-206ENST00000368300 SPZ1Q9BXG8 430 aa13.95□□□□□ -0.18
LMNA-206ENST00000368300 DDX60LQ5H9U9 1706 aaKnown RBP13.95□□□□□ -0.18
LMNA-206ENST00000368300 SHMT1P34896 483 aa13.95□□□□□ -0.18
LMNA-206ENST00000368300 E4F1Q66K89 784 aaPredicted RBP13.94□□□□□ -0.18
LMNA-206ENST00000368300 TRIML1Q8N9V2 468 aa13.94□□□□□ -0.18
LMNA-206ENST00000368300 CCDC34Q96HJ3 373 aa13.94□□□□□ -0.18
LMNA-206ENST00000368300 LZTS2Q9BRK4 669 aa13.94□□□□□ -0.18
LMNA-206ENST00000368300 ZMYND12Q9H0C1 365 aa13.94□□□□□ -0.18
LMNA-206ENST00000368300 ZNF18P17022 549 aa13.94□□□□□ -0.18
LMNA-206ENST00000368300 STAT6P42226 847 aa13.94□□□□□ -0.18
LMNA-206ENST00000368300 SOGA3Q5TF21 947 aa13.94□□□□□ -0.18
LMNA-206ENST00000368300 KCTD1Q719H9 257 aa13.94□□□□□ -0.18
LMNA-206ENST00000368300 VSTM4Q8IW00 320 aa13.94□□□□□ -0.18
LMNA-206ENST00000368300 ZSCAN29Q8IWY8 852 aaPredicted RBP13.94□□□□□ -0.18
LMNA-206ENST00000368300 CCAR2Q8N163 923 aaKnown RBP13.94□□□□□ -0.18
LMNA-206ENST00000368300 UIMC1Q96RL1 719 aa13.94□□□□□ -0.18
LMNA-206ENST00000368300 PDGFDQ9GZP0 370 aaPredicted RBP13.94□□□□□ -0.18
LMNA-206ENST00000368300 DACH1Q9UI36 760 aa13.94□□□□□ -0.18
LMNA-206ENST00000368300 ANKRD31Q8N7Z5 1873 aa13.94□□□□□ -0.18
LMNA-206ENST00000368300 PPP1R3GB7ZBB8 358 aa13.93□□□□□ -0.18
LMNA-206ENST00000368300 H0YIN7 160 aa13.93□□□□□ -0.18
LMNA-206ENST00000368300 CBFA2T2O43439 604 aa13.93□□□□□ -0.18
LMNA-206ENST00000368300 AOC3Q16853 763 aa13.93□□□□□ -0.18
LMNA-206ENST00000368300 LRRC15Q8TF66 581 aa13.93□□□□□ -0.18
LMNA-206ENST00000368300 CCDC94Q9BW85 323 aaPredicted RBP13.93□□□□□ -0.18
LMNA-206ENST00000368300 CTNND2Q9UQB3 1225 aa13.93□□□□□ -0.18
LMNA-206ENST00000368300 TEX33O43247 280 aa13.93□□□□□ -0.18
LMNA-206ENST00000368300 RRAGBQ5VZM2 374 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms