RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 OTOP1Q7RTM1 612 aa21.84■■□□□ 1.09
LMNA-204ENST00000368298 SGMS1Q86VZ5 419 aa21.84■■□□□ 1.09
LMNA-204ENST00000368298 EFCC1Q9HA90 598 aa21.84■■□□□ 1.09
LMNA-204ENST00000368298 SLC38A10Q9HBR0 1119 aa21.84■■□□□ 1.09
LMNA-204ENST00000368298 GPHNQ9NQX3 736 aaPredicted RBP21.84■■□□□ 1.09
LMNA-204ENST00000368298 MTMR7Q9Y216 660 aa21.84■■□□□ 1.09
LMNA-204ENST00000368298 ZSWIM8A7E2V4 1837 aa21.84■■□□□ 1.09
LMNA-204ENST00000368298 PKN2Q16513 984 aaKnown RBP21.83■■□□□ 1.09
LMNA-204ENST00000368298 CCDC96Q2M329 555 aa21.83■■□□□ 1.09
LMNA-204ENST00000368298 SHCBP1Q8NEM2 672 aa21.83■■□□□ 1.09
LMNA-204ENST00000368298 KIFC2Q96AC6 838 aa21.83■■□□□ 1.09
LMNA-204ENST00000368298 MAP3K14Q99558 947 aa21.83■■□□□ 1.09
LMNA-204ENST00000368298 SPATC1LQ9H0A9 340 aa21.83■■□□□ 1.09
LMNA-204ENST00000368298 ZSWIM6Q9HCJ5 1215 aa21.83■■□□□ 1.09
LMNA-204ENST00000368298 ZNF214Q9UL59 606 aaPredicted RBP21.83■■□□□ 1.09
LMNA-204ENST00000368298 MAPK4P31152 587 aa21.83■■□□□ 1.08
LMNA-204ENST00000368298 OAZ1P54368 228 aa21.83■■□□□ 1.08
LMNA-204ENST00000368298 TTBK2Q6IQ55 1244 aa21.83■■□□□ 1.08
LMNA-204ENST00000368298 BLOC1S2Q6QNY1 142 aa21.83■■□□□ 1.08
LMNA-204ENST00000368298 PORCNQ9H237 461 aa21.83■■□□□ 1.08
LMNA-204ENST00000368298 PRR12Q9ULL5 1215 aa21.83■■□□□ 1.08
LMNA-204ENST00000368298 FRMPD2Q68DX3 1309 aaPredicted RBP21.82■■□□□ 1.08
LMNA-204ENST00000368298 ZBED4O75132 1171 aa21.82■■□□□ 1.08
LMNA-204ENST00000368298 PARP1P09874 1014 aaKnown RBP21.82■■□□□ 1.08
LMNA-204ENST00000368298 RPS6KB1P23443 525 aa21.82■■□□□ 1.08
LMNA-204ENST00000368298 PRMT2P55345 433 aa21.82■■□□□ 1.08
LMNA-204ENST00000368298 CATIPQ7Z7H3 387 aa21.82■■□□□ 1.08
LMNA-204ENST00000368298 CHMP4CQ96CF2 233 aa21.82■■□□□ 1.08
LMNA-204ENST00000368298 MOV10L1Q9BXT6 1211 aaKnown RBP21.82■■□□□ 1.08
LMNA-204ENST00000368298 AGXT2Q9BYV1 514 aa21.82■■□□□ 1.08
LMNA-204ENST00000368298 GPCPD1Q9NPB8 672 aa21.82■■□□□ 1.08
LMNA-204ENST00000368298 TRIM17Q9Y577 477 aa21.82■■□□□ 1.08
LMNA-204ENST00000368298 PALM3A6NDB9 673 aaPredicted RBP21.81■■□□□ 1.08
LMNA-204ENST00000368298 DDAH1O94760 285 aa21.81■■□□□ 1.08
LMNA-204ENST00000368298 FMNL1O95466 1100 aaPredicted RBP21.81■■□□□ 1.08
LMNA-204ENST00000368298 CASTP20810 708 aaKnown RBP21.81■■□□□ 1.08
LMNA-204ENST00000368298 HOXD10P28358 340 aa21.81■■□□□ 1.08
LMNA-204ENST00000368298 IKQ13123 557 aaPredicted RBP21.81■■□□□ 1.08
LMNA-204ENST00000368298 GRM4Q14833 912 aa21.81■■□□□ 1.08
LMNA-204ENST00000368298 RUFY3Q7L099 469 aa21.81■■□□□ 1.08
LMNA-204ENST00000368298 RIOX2Q8IUF8 465 aa21.81■■□□□ 1.08
LMNA-204ENST00000368298 ZNF654Q8IZM8 581 aa21.81■■□□□ 1.08
LMNA-204ENST00000368298 IPO9Q96P70 1041 aaKnown RBP21.81■■□□□ 1.08
LMNA-204ENST00000368298 LRRC2Q9BYS8 371 aa21.81■■□□□ 1.08
LMNA-204ENST00000368298 MAD2L2Q9UI95 211 aa21.81■■□□□ 1.08
LMNA-204ENST00000368298 TNPO2O14787 897 aaKnown RBP21.8■■□□□ 1.08
LMNA-204ENST00000368298 SLC25A27O95847 323 aa21.8■■□□□ 1.08
LMNA-204ENST00000368298 GOLGA8HP0CJ92 632 aa21.8■■□□□ 1.08
LMNA-204ENST00000368298 SLC16A2P36021 539 aa21.8■■□□□ 1.08
LMNA-204ENST00000368298 STAT3P40763 770 aa21.8■■□□□ 1.08
LMNA-204ENST00000368298 SYDE2Q5VT97 1194 aa21.8■■□□□ 1.08
LMNA-204ENST00000368298 SAMD1Q6SPF0 538 aaPredicted RBP21.8■■□□□ 1.08
LMNA-204ENST00000368298 TCEANC2Q96MN5 208 aa21.8■■□□□ 1.08
LMNA-204ENST00000368298 MROH8Q9H579 483 aa21.8■■□□□ 1.08
LMNA-204ENST00000368298 SRRDQ9UH36 339 aa21.8■■□□□ 1.08
LMNA-204ENST00000368298 ISY1Q9ULR0 285 aaKnown RBP21.8■■□□□ 1.08
LMNA-204ENST00000368298 DOCK3Q8IZD9 2030 aa21.79■■□□□ 1.08
LMNA-204ENST00000368298 CCDC69A6NI79 296 aa21.79■■□□□ 1.08
LMNA-204ENST00000368298 CPA1P15085 419 aa21.79■■□□□ 1.08
LMNA-204ENST00000368298 COPB2P35606 906 aa21.79■■□□□ 1.08
LMNA-204ENST00000368298 COA7Q96BR5 231 aa21.79■■□□□ 1.08
LMNA-204ENST00000368298 TEX13BQ9BXU2 312 aa21.79■■□□□ 1.08
LMNA-204ENST00000368298 RANBP17Q9H2T7 1088 aaKnown RBP21.79■■□□□ 1.08
LMNA-204ENST00000368298 PTPN22Q9Y2R2 807 aa21.79■■□□□ 1.08
LMNA-204ENST00000368298 ZNF536O15090 1300 aa21.78■■□□□ 1.08
LMNA-204ENST00000368298 CALM1P0DP23 149 aa21.78■■□□□ 1.08
LMNA-204ENST00000368298 CALM2P0DP24 149 aa21.78■■□□□ 1.08
LMNA-204ENST00000368298 CALM3P0DP25 149 aa21.78■■□□□ 1.08
LMNA-204ENST00000368298 NFXL1Q6ZNB6 911 aa21.78■■□□□ 1.08
LMNA-204ENST00000368298 GPR142Q7Z601 462 aa21.78■■□□□ 1.08
LMNA-204ENST00000368298 STAG2Q8N3U4 1231 aa21.78■■□□□ 1.08
LMNA-204ENST00000368298 GJD2Q9UKL4 321 aa21.78■■□□□ 1.08
LMNA-204ENST00000368298 SLC12A7Q9Y666 1083 aa21.78■■□□□ 1.08
LMNA-204ENST00000368298 CYP46A1Q9Y6A2 500 aa21.78■■□□□ 1.08
LMNA-204ENST00000368298 KLRF2D3W0D1 207 aa21.77■■□□□ 1.08
LMNA-204ENST00000368298 STRNO43815 780 aa21.77■■□□□ 1.08
LMNA-204ENST00000368298 ERCC3P19447 782 aa21.77■■□□□ 1.08
LMNA-204ENST00000368298 PLS1Q14651 629 aa21.77■■□□□ 1.08
LMNA-204ENST00000368298 FBXO46Q6PJ61 603 aaPredicted RBP21.77■■□□□ 1.08
LMNA-204ENST00000368298 APOA5Q6Q788 366 aa21.77■■□□□ 1.08
LMNA-204ENST00000368298 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.77■■□□□ 1.08
LMNA-204ENST00000368298 PLEKHH3Q7Z736 793 aa21.77■■□□□ 1.08
LMNA-204ENST00000368298 CCAR1Q8IX12 1150 aaKnown RBP21.77■■□□□ 1.08
LMNA-204ENST00000368298 ABHD8Q96I13 439 aa21.77■■□□□ 1.08
LMNA-204ENST00000368298 CTDP1Q9Y5B0 961 aaPredicted RBP21.77■■□□□ 1.08
LMNA-204ENST00000368298 PLXNB2O15031 1838 aa21.77■■□□□ 1.08
LMNA-204ENST00000368298 RCAN1P53805 252 aa21.77■■□□□ 1.07
LMNA-204ENST00000368298 EVCP57679 992 aa21.77■■□□□ 1.07
LMNA-204ENST00000368298 MORN1Q5T089 497 aa21.77■■□□□ 1.07
LMNA-204ENST00000368298 SNRNP48Q6IEG0 339 aaKnown RBP21.77■■□□□ 1.07
LMNA-204ENST00000368298 Q6ZUG5 572 aa21.77■■□□□ 1.07
LMNA-204ENST00000368298 USP6NLQ92738 828 aa21.77■■□□□ 1.07
LMNA-204ENST00000368298 MCOLN1Q9GZU1 580 aa21.77■■□□□ 1.07
LMNA-204ENST00000368298 UBA5Q9GZZ9 404 aa21.77■■□□□ 1.07
LMNA-204ENST00000368298 RAVER2Q9HCJ3 691 aaKnown RBP21.77■■□□□ 1.07
LMNA-204ENST00000368298 PNMA2Q9UL42 364 aa21.77■■□□□ 1.07
LMNA-204ENST00000368298 BRPF3Q9ULD4 1205 aa21.77■■□□□ 1.07
LMNA-204ENST00000368298 ICAM1P05362 532 aa21.76■■□□□ 1.07
LMNA-204ENST00000368298 SMARCA1P28370 1054 aa21.76■■□□□ 1.07
LMNA-204ENST00000368298 KIF5BP33176 963 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms