RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 KRT33BQ14525 404 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 PPP2R5AQ15172 486 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 UBE2Q2Q8WVN8 375 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 IFNKQ9P0W0 207 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 SAMD15Q9P1V8 674 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 PCDHB15Q9Y5E8 787 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 AFF2P51816 1311 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 DKC1O60832 514 aaKnown RBP eCLIP7.79□□□□□ -1.16
SPTA1-201ENST00000368147 TUBBP07437 444 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 P4HA1P13674 534 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 PPARAQ07869 468 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 LRRC23Q53EV4 343 aaPredicted RBP7.79□□□□□ -1.16
SPTA1-201ENST00000368147 CNNM4Q6P4Q7 775 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 ZNF496Q96IT1 587 aaPredicted RBP7.79□□□□□ -1.16
SPTA1-201ENST00000368147 PGBD1Q96JS3 809 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 RALGAPBQ86X10 1494 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 POLR3AO14802 1390 aaPredicted RBP7.78□□□□□ -1.16
SPTA1-201ENST00000368147 IREB2P48200 963 aaKnown RBP7.78□□□□□ -1.16
SPTA1-201ENST00000368147 POTEDQ86YR6 584 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 ANKRD44Q8N8A2 993 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 NAP1L4Q99733 375 aaKnown RBP7.78□□□□□ -1.16
SPTA1-201ENST00000368147 HINFPQ9BQA5 517 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 ADPGKQ9BRR6 497 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 ZNF277Q9NRM2 450 aaPredicted RBP7.78□□□□□ -1.16
SPTA1-201ENST00000368147 OLA1Q9NTK5 396 aaKnown RBP7.78□□□□□ -1.16
SPTA1-201ENST00000368147 DDX25Q9UHL0 483 aaKnown RBP7.78□□□□□ -1.16
SPTA1-201ENST00000368147 DNAI1Q9UI46 699 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 TMOD1P28289 359 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 GNL1P36915 607 aaPredicted RBP7.78□□□□□ -1.16
SPTA1-201ENST00000368147 PSMD2Q13200 908 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 TTC38Q5R3I4 469 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 CABP7Q86V35 215 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 FBXO11Q86XK2 927 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 ZBTB8OSQ8IWT0 167 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 GREM2Q9H772 168 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.78□□□□□ -1.16
SPTA1-201ENST00000368147 ARAP3Q8WWN8 1544 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 ZNF804BA4D1E1 1349 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 DEXIO95424 95 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 TNNC2P02585 160 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 DMP1Q13316 513 aaPredicted RBP7.78□□□□□ -1.16
SPTA1-201ENST00000368147 SUPT20HL1Q3ZLR7 823 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 HSP90AA5PQ58FG0 334 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 RASSF4Q9H2L5 321 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 UBN1Q9NPG3 1134 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 ADGBQ8N7X0 1667 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 KIAA0232Q92628 1395 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.78□□□□□ -1.16
SPTA1-201ENST00000368147 TLR3O15455 904 aaKnown RBP7.78□□□□□ -1.16
SPTA1-201ENST00000368147 BUB1BO60566 1050 aaPredicted RBP7.78□□□□□ -1.16
SPTA1-201ENST00000368147 RASSF2P50749 326 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 CACNB3P54284 484 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 TRIM50Q86XT4 487 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 INPP5FQ9Y2H2 1132 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 ESPNB1AK53 854 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 SMIM5Q71RC9 77 aa7.78□□□□□ -1.16
SPTA1-201ENST00000368147 ESYT2A0FGR8 921 aa7.77□□□□□ -1.16
SPTA1-201ENST00000368147 PFDN1O60925 122 aa7.77□□□□□ -1.16
SPTA1-201ENST00000368147 RPS6KB1P23443 525 aa7.77□□□□□ -1.16
SPTA1-201ENST00000368147 LRRC24Q50LG9 513 aa7.77□□□□□ -1.16
SPTA1-201ENST00000368147 ZSCAN30Q86W11 494 aa7.77□□□□□ -1.16
SPTA1-201ENST00000368147 GPBP1Q86WP2 473 aa7.77□□□□□ -1.16
SPTA1-201ENST00000368147 TBC1D22AQ8WUA7 517 aa7.77□□□□□ -1.16
SPTA1-201ENST00000368147 NOX5Q96PH1 765 aa7.77□□□□□ -1.16
SPTA1-201ENST00000368147 GBP5Q96PP8 586 aa7.77□□□□□ -1.16
SPTA1-201ENST00000368147 LMCD1Q9NZU5 365 aa7.77□□□□□ -1.16
SPTA1-201ENST00000368147 F13A1P00488 732 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 CTAGE8P0CG41 777 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 LTKP29376 864 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 CYP4A11Q02928 519 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 CCDC157Q569K6 752 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 CEP85LQ5SZL2 805 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 C1orf228Q6PIY5 440 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 CAPN12Q6ZSI9 719 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 CTAGE4Q8IX94 777 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 ARFGAP2Q8N6H7 521 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 IQUBQ8NA54 791 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 ALKBH8Q96BT7 664 aaKnown RBP7.77□□□□□ -1.17
SPTA1-201ENST00000368147 SEC31BQ9NQW1 1179 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 HAUS2Q9NVX0 235 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 NUB1Q9Y5A7 615 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 CFAP43Q8NDM7 1665 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 SRGAP2CP0DJJ0 459 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 MYBP10242 640 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 NLGN1Q8N2Q7 840 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 OTUD7AQ8TE49 926 aaPredicted RBP7.77□□□□□ -1.17
SPTA1-201ENST00000368147 ATP7AQ04656 1500 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 LUC7L3O95232 432 aaKnown RBP7.77□□□□□ -1.17
SPTA1-201ENST00000368147 MMP10P09238 476 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 GCNAQ96QF7 691 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 LARSQ9P2J5 1176 aaKnown RBP7.77□□□□□ -1.17
SPTA1-201ENST00000368147 SCAF8Q9UPN6 1271 aaKnown RBP7.77□□□□□ -1.17
SPTA1-201ENST00000368147 ABCC10Q5T3U5 1492 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 TTC41PQ6P2S7 1318 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 SMIM24O75264 130 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 CLNS1AP54105 237 aaKnown RBP7.77□□□□□ -1.17
SPTA1-201ENST00000368147 DYNLL1P63167 89 aaKnown RBP7.77□□□□□ -1.17
SPTA1-201ENST00000368147 FAM160B1Q5W0V3 765 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 INTS8Q75QN2 995 aaKnown RBP7.77□□□□□ -1.17
SPTA1-201ENST00000368147 SDCCAG8Q86SQ7 713 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms