RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 ZNF236Q9UL36 1845 aa28.2■■■□□ 2.1
PFDN2-201ENST00000368010 SGSM2O43147 1006 aa28.19■■■□□ 2.1
PFDN2-201ENST00000368010 SGPL1O95470 568 aa28.19■■■□□ 2.1
PFDN2-201ENST00000368010 FCER1AP12319 257 aa28.19■■■□□ 2.1
PFDN2-201ENST00000368010 PRKAR2AP13861 404 aaKnown RBP28.19■■■□□ 2.1
PFDN2-201ENST00000368010 IKQ13123 557 aaPredicted RBP28.19■■■□□ 2.1
PFDN2-201ENST00000368010 MAP3K21Q5TCX8 1036 aa28.19■■■□□ 2.1
PFDN2-201ENST00000368010 CHURC1Q8WUH1 139 aa28.19■■■□□ 2.1
PFDN2-201ENST00000368010 CHMP4CQ96CF2 233 aa28.19■■■□□ 2.1
PFDN2-201ENST00000368010 TTC14Q96N46 770 aa28.19■■■□□ 2.1
PFDN2-201ENST00000368010 TMEM47Q9BQJ4 181 aa28.19■■■□□ 2.1
PFDN2-201ENST00000368010 MTMR7Q9Y216 660 aa28.19■■■□□ 2.1
PFDN2-201ENST00000368010 COL11A1P12107 1806 aaPredicted RBP28.19■■■□□ 2.1
PFDN2-201ENST00000368010 SNRNP48Q6IEG0 339 aaKnown RBP28.18■■■□□ 2.1
PFDN2-201ENST00000368010 RCSD1Q6JBY9 416 aa28.18■■■□□ 2.1
PFDN2-201ENST00000368010 NPLOC4Q8TAT6 608 aa28.18■■■□□ 2.1
PFDN2-201ENST00000368010 DCAF4Q8WV16 495 aa28.18■■■□□ 2.1
PFDN2-201ENST00000368010 SLC38A10Q9HBR0 1119 aa28.18■■■□□ 2.1
PFDN2-201ENST00000368010 SLC5A4Q9NY91 659 aa28.18■■■□□ 2.1
PFDN2-201ENST00000368010 ATP2A1O14983 1001 aa28.17■■■□□ 2.1
PFDN2-201ENST00000368010 KDM4AO75164 1064 aa28.17■■■□□ 2.1
PFDN2-201ENST00000368010 FDX1P10109 184 aa28.17■■■□□ 2.1
PFDN2-201ENST00000368010 CAPN2P17655 700 aa28.17■■■□□ 2.1
PFDN2-201ENST00000368010 MFSD14CQ5VZR4 134 aa28.17■■■□□ 2.1
PFDN2-201ENST00000368010 KCTD1Q719H9 257 aa28.17■■■□□ 2.1
PFDN2-201ENST00000368010 SKAP1Q86WV1 359 aa28.17■■■□□ 2.1
PFDN2-201ENST00000368010 IQCA1Q86XH1 822 aa28.17■■■□□ 2.1
PFDN2-201ENST00000368010 CPXCR1Q8N123 301 aa28.17■■■□□ 2.1
PFDN2-201ENST00000368010 CNNM2Q9H8M5 875 aa28.17■■■□□ 2.1
PFDN2-201ENST00000368010 B4E1Z4 1266 aa28.16■■■□□ 2.1
PFDN2-201ENST00000368010 PLA2G6O60733 806 aa28.16■■■□□ 2.1
PFDN2-201ENST00000368010 KCTD2Q14681 263 aa28.16■■■□□ 2.1
PFDN2-201ENST00000368010 CCDC96Q2M329 555 aa28.16■■■□□ 2.1
PFDN2-201ENST00000368010 CCDC178Q5BJE1 867 aa28.16■■■□□ 2.1
PFDN2-201ENST00000368010 BMP2KLQ5H9B9 411 aa28.16■■■□□ 2.1
PFDN2-201ENST00000368010 RASGRP2Q7LDG7 609 aa28.16■■■□□ 2.1
PFDN2-201ENST00000368010 MMP19Q99542 508 aa28.16■■■□□ 2.1
PFDN2-201ENST00000368010 KRT23Q9C075 422 aa28.16■■■□□ 2.1
PFDN2-201ENST00000368010 FLRT1Q9NZU1 646 aa28.16■■■□□ 2.1
PFDN2-201ENST00000368010 U3KPZ7 1027 aaPredicted RBP28.16■■■□□ 2.1
PFDN2-201ENST00000368010 OAZ1P54368 228 aa28.15■■■□□ 2.1
PFDN2-201ENST00000368010 PTH1RQ03431 593 aa28.15■■■□□ 2.1
PFDN2-201ENST00000368010 CACNB2Q08289 660 aaPredicted RBP28.15■■■□□ 2.1
PFDN2-201ENST00000368010 ZKSCAN3Q9BRR0 538 aa28.15■■■□□ 2.1
PFDN2-201ENST00000368010 RAVER2Q9HCJ3 691 aaKnown RBP28.15■■■□□ 2.1
PFDN2-201ENST00000368010 BRCA2P51587 3418 aa28.15■■■□□ 2.1
PFDN2-201ENST00000368010 COBLO75128 1261 aa28.14■■■□□ 2.1
PFDN2-201ENST00000368010 TFRCP02786 760 aaKnown RBP28.14■■■□□ 2.1
PFDN2-201ENST00000368010 SLC4A3P48751 1232 aa28.14■■■□□ 2.1
PFDN2-201ENST00000368010 DGKHQ86XP1 1220 aa28.14■■■□□ 2.1
PFDN2-201ENST00000368010 OLFML2BQ68BL8 750 aa28.13■■■□□ 2.09
PFDN2-201ENST00000368010 CRISPLD2Q9H0B8 497 aa28.13■■■□□ 2.09
PFDN2-201ENST00000368010 RIPK3Q9Y572 518 aa28.13■■■□□ 2.09
PFDN2-201ENST00000368010 KIAA1211Q6ZU35 1233 aa28.12■■■□□ 2.09
PFDN2-201ENST00000368010 ZSCAN10Q96SZ4 725 aaPredicted RBP28.12■■■□□ 2.09
PFDN2-201ENST00000368010 ZSWIM5Q9P217 1185 aa28.12■■■□□ 2.09
PFDN2-201ENST00000368010 PRR12Q9ULL5 1215 aa28.12■■■□□ 2.09
PFDN2-201ENST00000368010 CYP21A2P08686 494 aa28.11■■■□□ 2.09
PFDN2-201ENST00000368010 PDHBP11177 359 aa28.11■■■□□ 2.09
PFDN2-201ENST00000368010 CYP2C19P33261 490 aa28.11■■■□□ 2.09
PFDN2-201ENST00000368010 TRDNQ13061 729 aa28.11■■■□□ 2.09
PFDN2-201ENST00000368010 FARP2O94887 1054 aaPredicted RBP28.1■■■□□ 2.09
PFDN2-201ENST00000368010 CCND3P30281 292 aaPredicted RBP28.1■■■□□ 2.09
PFDN2-201ENST00000368010 MAP4K1Q92918 833 aa28.1■■■□□ 2.09
PFDN2-201ENST00000368010 UBAC1Q9BSL1 405 aa28.1■■■□□ 2.09
PFDN2-201ENST00000368010 FBXO40Q9UH90 709 aa28.1■■■□□ 2.09
PFDN2-201ENST00000368010 FRMPD2Q68DX3 1309 aaPredicted RBP28.1■■■□□ 2.09
PFDN2-201ENST00000368010 IGHA2P01877 340 aa28.09■■■□□ 2.09
PFDN2-201ENST00000368010 PGK2P07205 417 aa28.09■■■□□ 2.09
PFDN2-201ENST00000368010 CHST13Q8NET6 341 aa28.09■■■□□ 2.09
PFDN2-201ENST00000368010 ANKS1AQ92625 1134 aa28.09■■■□□ 2.09
PFDN2-201ENST00000368010 MAML3Q96JK9 1138 aa28.09■■■□□ 2.09
PFDN2-201ENST00000368010 ESYT1Q9BSJ8 1104 aa28.09■■■□□ 2.09
PFDN2-201ENST00000368010 KAT14Q9H8E8 782 aa28.09■■■□□ 2.09
PFDN2-201ENST00000368010 GPCPD1Q9NPB8 672 aa28.09■■■□□ 2.09
PFDN2-201ENST00000368010 TNKSO95271 1327 aa28.09■■■□□ 2.09
PFDN2-201ENST00000368010 CENPBP07199 599 aaPredicted RBP28.08■■■□□ 2.09
PFDN2-201ENST00000368010 SNHG28P0DPA3 235 aa28.08■■■□□ 2.09
PFDN2-201ENST00000368010 TTBK2Q6IQ55 1244 aa28.08■■■□□ 2.09
PFDN2-201ENST00000368010 BTNL9Q6UXG8 535 aa28.08■■■□□ 2.09
PFDN2-201ENST00000368010 UBE2Q1Q7Z7E8 422 aa28.08■■■□□ 2.09
PFDN2-201ENST00000368010 DDX11Q96FC9 970 aa28.08■■■□□ 2.09
PFDN2-201ENST00000368010 DIS3Q9Y2L1 958 aaKnown RBP28.08■■■□□ 2.09
PFDN2-201ENST00000368010 SLC16A2P36021 539 aa28.07■■■□□ 2.08
PFDN2-201ENST00000368010 ZNF543Q08ER8 600 aa28.07■■■□□ 2.08
PFDN2-201ENST00000368010 ZNF792Q3KQV3 632 aa28.07■■■□□ 2.08
PFDN2-201ENST00000368010 SYDE2Q5VT97 1194 aa28.07■■■□□ 2.08
PFDN2-201ENST00000368010 CCDC174Q6PII3 467 aa28.07■■■□□ 2.08
PFDN2-201ENST00000368010 ENAHQ8N8S7 591 aaPredicted RBP28.07■■■□□ 2.08
PFDN2-201ENST00000368010 ANKLE1Q8NAG6 615 aa28.07■■■□□ 2.08
PFDN2-201ENST00000368010 PNMA1Q8ND90 353 aa28.07■■■□□ 2.08
PFDN2-201ENST00000368010 RBM8AQ9Y5S9 174 aaKnown RBP28.07■■■□□ 2.08
PFDN2-201ENST00000368010 ZNF536O15090 1300 aa28.07■■■□□ 2.08
PFDN2-201ENST00000368010 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.06■■■□□ 2.08
PFDN2-201ENST00000368010 RALYLQ86SE5 291 aaKnown RBP28.06■■■□□ 2.08
PFDN2-201ENST00000368010 AGBL1Q96MI9 1066 aa28.06■■■□□ 2.08
PFDN2-201ENST00000368010 HOMER2Q9NSB8 354 aa28.06■■■□□ 2.08
PFDN2-201ENST00000368010 OGDHLQ9ULD0 1010 aa28.06■■■□□ 2.08
PFDN2-201ENST00000368010 TNRC18O15417 2968 aaPredicted RBP28.06■■■□□ 2.08
PFDN2-201ENST00000368010 PDE4DIPQ5VU43 2346 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms