RNA–Protein interactions for RNA: ENST00000367505.6

SHPRH-203, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SHPRH, Length 7,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-203ENST00000367505 CCDC170Q8IYT3 715 aa9.11□□□□□ -0.95
SHPRH-203ENST00000367505 PANX2Q96RD6 677 aa9.11□□□□□ -0.95
SHPRH-203ENST00000367505 TNKSO95271 1327 aa9.11□□□□□ -0.95
SHPRH-203ENST00000367505 CEP170Q5SW79 1584 aa9.11□□□□□ -0.95
SHPRH-203ENST00000367505 SLC8A3P57103 927 aa9.11□□□□□ -0.95
SHPRH-203ENST00000367505 NEK8Q86SG6 692 aa9.11□□□□□ -0.95
SHPRH-203ENST00000367505 ZBTB38Q8NAP3 1195 aaPredicted RBP9.11□□□□□ -0.95
SHPRH-203ENST00000367505 CABLES1Q8TDN4 633 aa9.11□□□□□ -0.95
SHPRH-203ENST00000367505 ATG3Q9NT62 314 aa9.11□□□□□ -0.95
SHPRH-203ENST00000367505 ZNF219Q9P2Y4 722 aaPredicted RBP9.11□□□□□ -0.95
SHPRH-203ENST00000367505 PPP1R12CQ9BZL4 782 aa9.11□□□□□ -0.95
SHPRH-203ENST00000367505 SAP30BPQ9UHR5 308 aaKnown RBP9.11□□□□□ -0.95
SHPRH-203ENST00000367505 LUC7L3O95232 432 aaKnown RBP9.11□□□□□ -0.95
SHPRH-203ENST00000367505 PTGDRQ13258 359 aa9.11□□□□□ -0.95
SHPRH-203ENST00000367505 DCUN1D2Q6PH85 259 aa9.11□□□□□ -0.95
SHPRH-203ENST00000367505 UNC5CLQ8IV45 518 aa9.11□□□□□ -0.95
SHPRH-203ENST00000367505 SLC35F6Q8N357 371 aa9.11□□□□□ -0.95
SHPRH-203ENST00000367505 SMC1BQ8NDV3 1235 aa9.11□□□□□ -0.95
SHPRH-203ENST00000367505 FAM212AQ96EL1 285 aa9.11□□□□□ -0.95
SHPRH-203ENST00000367505 PDLIM2Q96JY6 352 aa9.11□□□□□ -0.95
SHPRH-203ENST00000367505 A0A087WUV0 522 aaPredicted RBP9.11□□□□□ -0.95
SHPRH-203ENST00000367505 HSPA1LP34931 641 aa9.11□□□□□ -0.95
SHPRH-203ENST00000367505 GUCY2FP51841 1108 aa9.11□□□□□ -0.95
SHPRH-203ENST00000367505 APOA5Q6Q788 366 aa9.11□□□□□ -0.95
SHPRH-203ENST00000367505 VSTM4Q8IW00 320 aa9.11□□□□□ -0.95
SHPRH-203ENST00000367505 CDAN1Q8IWY9 1227 aa9.11□□□□□ -0.95
SHPRH-203ENST00000367505 SLFN12Q8IYM2 578 aa9.11□□□□□ -0.95
SHPRH-203ENST00000367505 ATP2A3Q93084 1043 aa9.11□□□□□ -0.95
SHPRH-203ENST00000367505 SLFN14P0C7P3 912 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 CASP14P31944 242 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 GGA1Q9UJY5 639 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 RRP15Q9Y3B9 282 aaKnown RBP9.1□□□□□ -0.95
SHPRH-203ENST00000367505 CDK12Q9NYV4 1490 aaPredicted RBP9.1□□□□□ -0.95
SHPRH-203ENST00000367505 PHBP35232 272 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 TRPC3Q13507 836 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 C11orf57Q6ZUT1 292 aaPredicted RBP9.1□□□□□ -0.95
SHPRH-203ENST00000367505 CNBD1Q8NA66 436 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 SYMPKQ92797 1274 aaKnown RBP9.1□□□□□ -0.95
SHPRH-203ENST00000367505 GDAP1L1Q96MZ0 367 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 TUBGCP2Q9BSJ2 902 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 DDX23Q9BUQ8 820 aaKnown RBP9.1□□□□□ -0.95
SHPRH-203ENST00000367505 DBNLQ9UJU6 430 aaKnown RBP9.1□□□□□ -0.95
SHPRH-203ENST00000367505 MAN1A1P33908 653 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 ZNF827Q17R98 1081 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 NELFCDQ8IXH7 590 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 KIFC2Q96AC6 838 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 RABEP2Q9H5N1 569 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 PCDHA12Q9UN75 941 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 USP17L12C9JPN9 530 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 USP17L21D6R901 530 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 FMNL1O95466 1100 aaPredicted RBP9.1□□□□□ -0.95
SHPRH-203ENST00000367505 RESTQ13127 1097 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 CLIC6Q96NY7 704 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 FAM114A2Q9NRY5 505 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 CCDC87Q9NVE4 849 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 ZBTB21Q9ULJ3 1066 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 IGSF1Q8N6C5 1336 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 SEMA3EO15041 775 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 KIF23Q02241 960 aaPredicted RBP9.1□□□□□ -0.95
SHPRH-203ENST00000367505 MIPOL1Q8TD10 442 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 U2AF1L4Q8WU68 220 aaKnown RBP9.1□□□□□ -0.95
SHPRH-203ENST00000367505 PLEKHG1Q9ULL1 1385 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 EVI5O60447 810 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 UFL1O94874 794 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 ARL1P40616 181 aaPredicted RBP9.1□□□□□ -0.95
SHPRH-203ENST00000367505 TPD52P55327 224 aaPredicted RBP9.1□□□□□ -0.95
SHPRH-203ENST00000367505 NECTIN1Q15223 517 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 SIRT2Q8IXJ6 389 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 RIC8AQ9NPQ8 531 aa9.1□□□□□ -0.95
SHPRH-203ENST00000367505 YWHAEP62258 255 aaKnown RBP9.09□□□□□ -0.95
SHPRH-203ENST00000367505 FAM26FQ5R3K3 315 aa9.09□□□□□ -0.95
SHPRH-203ENST00000367505 ALS2CLQ60I27 953 aa9.09□□□□□ -0.95
SHPRH-203ENST00000367505 PNMA1Q8ND90 353 aa9.09□□□□□ -0.95
SHPRH-203ENST00000367505 JRKLQ9Y4A0 524 aa9.09□□□□□ -0.95
SHPRH-203ENST00000367505 SUN1O94901 812 aa9.09□□□□□ -0.95
SHPRH-203ENST00000367505 LIG3P49916 1009 aa9.09□□□□□ -0.95
SHPRH-203ENST00000367505 C10orf76Q5T2E6 689 aa9.09□□□□□ -0.95
SHPRH-203ENST00000367505 GPBP1Q86WP2 473 aa9.09□□□□□ -0.95
SHPRH-203ENST00000367505 NEO1Q92859 1461 aa9.09□□□□□ -0.95
SHPRH-203ENST00000367505 ABCC12Q96J65 1359 aa9.09□□□□□ -0.95
SHPRH-203ENST00000367505 CFAP74Q9C0B2 1584 aa9.09□□□□□ -0.95
SHPRH-203ENST00000367505 COL4A3BPQ9Y5P4 624 aa9.09□□□□□ -0.95
SHPRH-203ENST00000367505 TMEM2Q9UHN6 1383 aa9.09□□□□□ -0.95
SHPRH-203ENST00000367505 IFNAR1P17181 557 aa9.09□□□□□ -0.95
SHPRH-203ENST00000367505 SNCBQ16143 134 aa9.09□□□□□ -0.95
SHPRH-203ENST00000367505 ODF2LQ9ULJ1 636 aa9.09□□□□□ -0.95
SHPRH-203ENST00000367505 CASQ2O14958 399 aaPredicted RBP9.09□□□□□ -0.95
SHPRH-203ENST00000367505 HSPA6P17066 643 aa9.09□□□□□ -0.95
SHPRH-203ENST00000367505 CCT5P48643 541 aa9.09□□□□□ -0.95
SHPRH-203ENST00000367505 ATP1A2P50993 1020 aa9.09□□□□□ -0.95
SHPRH-203ENST00000367505 CLCN6P51797 869 aa9.09□□□□□ -0.95
SHPRH-203ENST00000367505 ZNF658Q5TYW1 1059 aaPredicted RBP9.09□□□□□ -0.95
SHPRH-203ENST00000367505 DNAJC10Q8IXB1 793 aa9.09□□□□□ -0.95
SHPRH-203ENST00000367505 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.09□□□□□ -0.95
SHPRH-203ENST00000367505 SOS2Q07890 1332 aaPredicted RBP9.08□□□□□ -0.96
SHPRH-203ENST00000367505 PASKQ96RG2 1323 aa9.08□□□□□ -0.96
SHPRH-203ENST00000367505 CHMP2AO43633 222 aa9.08□□□□□ -0.96
SHPRH-203ENST00000367505 DTNBO60941 627 aa9.08□□□□□ -0.96
SHPRH-203ENST00000367505 POLA2Q14181 598 aa9.08□□□□□ -0.96
SHPRH-203ENST00000367505 TRAPPC3LQ5T215 181 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms