RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 CTAGE3PQ8IX95 158 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 MYL4P12829 197 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 NDUFAF2Q8N183 169 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 MEIS1O00470 390 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 BRD1O95696 1058 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 EEF1GP26641 437 aaKnown RBP4.13□□□□□ -1.75
SYNE1-207ENST00000367255 TBC1D5Q92609 795 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 DIAPH2O60879 1101 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 C4orf22Q6V702 233 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 UBL4BQ8N7F7 174 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 SYNJ2O15056 1496 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 CC2D2BQ6DHV5 1058 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 RPUSD2Q8IZ73 545 aaKnown RBP4.13□□□□□ -1.75
SYNE1-207ENST00000367255 MRPS27Q92552 414 aaKnown RBP4.13□□□□□ -1.75
SYNE1-207ENST00000367255 ATP6V0A4Q9HBG4 840 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 POLR3EQ9NVU0 708 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 POGZQ7Z3K3 1410 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 ACADSP16219 412 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 BPIFB4P59827 614 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 CCT2P78371 535 aaKnown RBP4.13□□□□□ -1.75
SYNE1-207ENST00000367255 LRRC23Q53EV4 343 aaPredicted RBP4.13□□□□□ -1.75
SYNE1-207ENST00000367255 C6orf52Q5T4I8 152 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 LPIN2Q92539 896 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 STN1Q9H668 368 aaKnown RBP4.13□□□□□ -1.75
SYNE1-207ENST00000367255 PHF11Q9UIL8 331 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 MIF4GDA9UHW6 222 aaKnown RBP4.13□□□□□ -1.75
SYNE1-207ENST00000367255 CCDC188H7C350 402 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 PRUNE1Q86TP1 453 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 ZHX2Q9Y6X8 837 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 KANSL1LA0AUZ9 987 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 DCTN3O75935 186 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 HOXB8P17481 243 aaPredicted RBP4.13□□□□□ -1.75
SYNE1-207ENST00000367255 CDK17Q00537 523 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 KRT80Q6KB66 452 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 BLOC1S2Q6QNY1 142 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 TRIM15Q9C019 465 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 HERC5Q9UII4 1024 aaKnown RBP4.13□□□□□ -1.75
SYNE1-207ENST00000367255 STOML2Q9UJZ1 356 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 ANGPTL2Q9UKU9 493 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 ITGA10O75578 1167 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 SERPINB2P05120 415 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 STAG2Q8N3U4 1231 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 NCLNQ969V3 563 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 KCND2Q9NZV8 630 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 PFDN6O15212 129 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 ADCY5O95622 1261 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 ZNF579Q8NAF0 562 aaKnown RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 DIXDC1Q155Q3 683 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 PCNX4Q63HM2 1172 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 ZFRQ96KR1 1074 aaKnown RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 PARNO95453 639 aaKnown RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 HABP4Q5JVS0 413 aaKnown RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 USP33Q8TEY7 942 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 SLC12A5Q9H2X9 1139 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 TRPC7Q9HCX4 862 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 NEURL4Q96JN8 1562 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 SAGE2PA6NJ88 616 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 SMTNP53814 917 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 ENPEPQ07075 957 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 ACRBPQ8NEB7 543 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 AFAP1L1Q8TED9 768 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 CABP2Q9NPB3 220 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 MAGI1Q96QZ7 1491 aaPredicted RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 RAD54L2Q9Y4B4 1467 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 CUL4BQ13620 913 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 GGNBP2Q9H3C7 697 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 SEPT10Q9P0V9 454 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 TADA2BQ86TJ2 420 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 SSH1Q8WYL5 1049 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 PIK3R4Q99570 1358 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 PRIM1P49642 420 aaKnown RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 PRPF3O43395 683 aaKnown RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 XPOTO43592 962 aaKnown RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 TRADDQ15628 312 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 SPATA1Q5VX52 437 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 USP48Q86UV5 1035 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 GIMAP4Q9NUV9 329 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 RABL2AQ9UBK7 228 aaPredicted RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 STK17AQ9UEE5 414 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 RABL2BQ9UNT1 228 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 EPRSP07814 1512 aaKnown RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 HECW1Q76N89 1606 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 CMPK2Q5EBM0 449 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 E7EVH7 732 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 HADHAP40939 763 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 KCTD19Q17RG1 926 aaPredicted RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 TDRD7Q8NHU6 1098 aaKnown RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 ITPKCQ96DU7 683 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 PLIN2Q99541 437 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 AP1M1Q9BXS5 423 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 METTL14Q9HCE5 456 aaKnown RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 OLFML3Q9NRN5 406 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 CARNS1A5YM72 827 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 ZSCAN22P10073 491 aaPredicted RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 STX1BP61266 288 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 TFAP4Q01664 338 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 DDI1Q8WTU0 396 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 I3L4J1 428 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 SPINK5Q9NQ38 1064 aaPredicted RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 UTP11Q9Y3A2 253 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms