RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 CARD10Q9BWT7 1032 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 IL6STP40189 918 aaPredicted RBP9.95□□□□□ -0.82
SYNE1-205ENST00000367251 SLC1A4P43007 532 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 MXRA7P84157 204 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 LRRC24Q50LG9 513 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 SARM1Q6SZW1 724 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 GBP6Q6ZN66 633 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 TRMT44Q8IYL2 757 aaKnown RBP9.95□□□□□ -0.82
SYNE1-205ENST00000367251 DHTKD1Q96HY7 919 aaPredicted RBP9.95□□□□□ -0.82
SYNE1-205ENST00000367251 METTL14Q9HCE5 456 aaKnown RBP9.95□□□□□ -0.82
SYNE1-205ENST00000367251 ALKQ9UM73 1620 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 RESTQ13127 1097 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 NCAPH2Q6IBW4 605 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 LINC00301Q8NCQ3 95 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 NPHP4O75161 1426 aaPredicted RBP9.95□□□□□ -0.82
SYNE1-205ENST00000367251 GMNNO75496 209 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 CRCPO75575 148 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 ADD2P35612 726 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 ADKP55263 362 aaKnown RBP9.95□□□□□ -0.82
SYNE1-205ENST00000367251 TTLL7Q6ZT98 887 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 CDAN1Q8IWY9 1227 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 PPP1R13BQ96KQ4 1090 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 FANCLQ9NW38 375 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 ATP2C2O75185 946 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 ADD1P35611 737 aaKnown RBP9.95□□□□□ -0.82
SYNE1-205ENST00000367251 KIF23Q02241 960 aaPredicted RBP9.95□□□□□ -0.82
SYNE1-205ENST00000367251 APOA5Q6Q788 366 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 FAM71BQ8TC56 605 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 BLZF1Q9H2G9 400 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 MAPK8IP1Q9UQF2 711 aa9.95□□□□□ -0.82
SYNE1-205ENST00000367251 ERVV-1B6SEH8 477 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 USP17L12C9JPN9 530 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 USP17L21D6R901 530 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 INPP5BP32019 993 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 ZBTB16Q05516 673 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 SKIV2LQ15477 1246 aaKnown RBP9.94□□□□□ -0.82
SYNE1-205ENST00000367251 RSRC1Q96IZ7 334 aaKnown RBP9.94□□□□□ -0.82
SYNE1-205ENST00000367251 RUNDC3BQ96NL0 473 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 KCNK9Q9NPC2 374 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 BZW2Q9Y6E2 419 aaKnown RBP9.94□□□□□ -0.82
SYNE1-205ENST00000367251 ABCC12Q96J65 1359 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 STRN3Q13033 797 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 FYB2Q5VWT5 728 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 PEX26Q7Z412 305 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 MAK16Q9BXY0 300 aaKnown RBP9.94□□□□□ -0.82
SYNE1-205ENST00000367251 PRR36Q9H6K5 1346 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 TLDC2A0PJX2 215 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 ALDH1B1P30837 517 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 LIFRP42702 1097 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 INTS8Q75QN2 995 aaKnown RBP9.94□□□□□ -0.82
SYNE1-205ENST00000367251 LARGE2Q8N3Y3 721 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 ENOX1Q8TC92 643 aaKnown RBP9.94□□□□□ -0.82
SYNE1-205ENST00000367251 MTA3Q9BTC8 594 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.94□□□□□ -0.82
SYNE1-205ENST00000367251 ANAPC4Q9UJX5 808 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 CEP104O60308 925 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 COPB1P53618 953 aaKnown RBP9.94□□□□□ -0.82
SYNE1-205ENST00000367251 ZNF365Q70YC5 407 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 RRAGAQ7L523 313 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 NOP9Q86U38 636 aaKnown RBP9.94□□□□□ -0.82
SYNE1-205ENST00000367251 RNF169Q8NCN4 708 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 SLAIN2Q9P270 581 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 CDC23Q9UJX2 597 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 PCDHB13Q9Y5F0 798 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 KIAA1210Q9ULL0 1709 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 SH2B2O14492 632 aaPredicted RBP9.94□□□□□ -0.82
SYNE1-205ENST00000367251 CSPG5O95196 566 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 RCAN1P53805 252 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 TGFBRAP1Q8WUH2 860 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 BPIFA3Q9BQP9 254 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 AMFRQ9UKV5 643 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 ZNF215Q9UL58 517 aaPredicted RBP9.94□□□□□ -0.82
SYNE1-205ENST00000367251 HEG1Q9ULI3 1381 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 AFG3L2Q9Y4W6 797 aa9.94□□□□□ -0.82
SYNE1-205ENST00000367251 E9PCH4 1651 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 KRT5P13647 590 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 IFNAR1P17181 557 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 PNMA1Q8ND90 353 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 SYMPKQ92797 1274 aaKnown RBP9.93□□□□□ -0.82
SYNE1-205ENST00000367251 SLC5A4Q9NY91 659 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 BTBD18B2RXH4 712 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 M0R2C6 588 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 SRGAP1Q7Z6B7 1085 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 MRPL44Q9H9J2 332 aaKnown RBP9.93□□□□□ -0.82
SYNE1-205ENST00000367251 CTTNBP2NLQ9P2B4 639 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 PYCARDQ9ULZ3 195 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 PCDHA4Q9UN74 947 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 H0YCG3 227 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 MMP1P03956 469 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 CHRNDQ07001 517 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 TYW1BQ6NUM6 668 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 SND1Q7KZF4 910 aaKnown RBP eCLIP9.93□□□□□ -0.82
SYNE1-205ENST00000367251 DYMQ7RTS9 669 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 TMC4Q7Z404 712 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 ZNF589Q86UQ0 364 aaPredicted RBP9.93□□□□□ -0.82
SYNE1-205ENST00000367251 C2CD5Q86YS7 1000 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 MYCT1Q8N699 235 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 SLC17A8Q8NDX2 589 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 STIM2Q9P246 746 aa9.93□□□□□ -0.82
SYNE1-205ENST00000367251 BCS1LQ9Y276 419 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms