RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 XBP1P17861 261 aa16.65■□□□□ 0.26
PRKN-204ENST00000366896 GYS2P54840 703 aa16.65■□□□□ 0.26
PRKN-204ENST00000366896 NR1I3Q14994 352 aa16.65■□□□□ 0.26
PRKN-204ENST00000366896 SEC23AQ15436 765 aa16.65■□□□□ 0.26
PRKN-204ENST00000366896 CAVIN4Q5BKX8 364 aa16.65■□□□□ 0.26
PRKN-204ENST00000366896 EARS2Q5JPH6 523 aaKnown RBP16.65■□□□□ 0.26
PRKN-204ENST00000366896 A0A087X0B3 334 aa16.64■□□□□ 0.25
PRKN-204ENST00000366896 A0A1B0GTH6 734 aa16.64■□□□□ 0.25
PRKN-204ENST00000366896 MINDY4BA8MYZ0 360 aa16.64■□□□□ 0.25
PRKN-204ENST00000366896 SEMA3EO15041 775 aa16.64■□□□□ 0.25
PRKN-204ENST00000366896 DPP8Q6V1X1 898 aaPredicted RBP16.64■□□□□ 0.25
PRKN-204ENST00000366896 UBAC1Q9BSL1 405 aa16.64■□□□□ 0.25
PRKN-204ENST00000366896 LCMT1Q9UIC8 334 aa16.64■□□□□ 0.25
PRKN-204ENST00000366896 TNKSO95271 1327 aa16.64■□□□□ 0.25
PRKN-204ENST00000366896 C21orf2O43822 256 aa16.64■□□□□ 0.25
PRKN-204ENST00000366896 CC2D2BQ6DHV5 1058 aa16.64■□□□□ 0.25
PRKN-204ENST00000366896 SH3RF1Q7Z6J0 888 aa16.64■□□□□ 0.25
PRKN-204ENST00000366896 VPS54Q9P1Q0 977 aa16.64■□□□□ 0.25
PRKN-204ENST00000366896 C6orf229H3BNL8 230 aa16.63■□□□□ 0.25
PRKN-204ENST00000366896 CYP7A1P22680 504 aa16.63■□□□□ 0.25
PRKN-204ENST00000366896 ACTN2P35609 894 aa16.63■□□□□ 0.25
PRKN-204ENST00000366896 LMAN1P49257 510 aa16.63■□□□□ 0.25
PRKN-204ENST00000366896 SRLQ86TD4 932 aa16.63■□□□□ 0.25
PRKN-204ENST00000366896 HNRNPLLQ8WVV9 542 aaKnown RBP16.63■□□□□ 0.25
PRKN-204ENST00000366896 ESR2Q92731 530 aa16.63■□□□□ 0.25
PRKN-204ENST00000366896 FERMT2Q96AC1 680 aa16.63■□□□□ 0.25
PRKN-204ENST00000366896 PANX2Q96RD6 677 aa16.63■□□□□ 0.25
PRKN-204ENST00000366896 NAA15Q9BXJ9 866 aaKnown RBP16.63■□□□□ 0.25
PRKN-204ENST00000366896 RAI14Q9P0K7 980 aa16.63■□□□□ 0.25
PRKN-204ENST00000366896 WNT7AO00755 349 aa16.63■□□□□ 0.25
PRKN-204ENST00000366896 PRDM1O75626 825 aa16.63■□□□□ 0.25
PRKN-204ENST00000366896 CASP1P29466 404 aa16.63■□□□□ 0.25
PRKN-204ENST00000366896 HIBADHP31937 336 aaKnown RBP16.63■□□□□ 0.25
PRKN-204ENST00000366896 NLGN2Q8NFZ4 835 aa16.63■□□□□ 0.25
PRKN-204ENST00000366896 TRIM75PA6NK02 468 aa16.62■□□□□ 0.25
PRKN-204ENST00000366896 PRPF3O43395 683 aaKnown RBP16.62■□□□□ 0.25
PRKN-204ENST00000366896 TMED8Q6PL24 325 aaPredicted RBP16.62■□□□□ 0.25
PRKN-204ENST00000366896 EPSTI1Q96J88 318 aa16.62■□□□□ 0.25
PRKN-204ENST00000366896 PHF20Q9BVI0 1012 aa16.62■□□□□ 0.25
PRKN-204ENST00000366896 EFCC1Q9HA90 598 aa16.62■□□□□ 0.25
PRKN-204ENST00000366896 CYP2D7A0A087X1C5 515 aa16.62■□□□□ 0.25
PRKN-204ENST00000366896 TRIM66O15016 1216 aa16.62■□□□□ 0.25
PRKN-204ENST00000366896 FGRP09769 529 aa16.62■□□□□ 0.25
PRKN-204ENST00000366896 FUT2Q10981 343 aa16.62■□□□□ 0.25
PRKN-204ENST00000366896 PKN1Q16512 942 aa16.62■□□□□ 0.25
PRKN-204ENST00000366896 DALRD3Q5D0E6 543 aaKnown RBP16.62■□□□□ 0.25
PRKN-204ENST00000366896 MSL3Q8N5Y2 521 aaKnown RBP16.62■□□□□ 0.25
PRKN-204ENST00000366896 CCDC12Q8WUD4 166 aaPredicted RBP16.62■□□□□ 0.25
PRKN-204ENST00000366896 DESI2Q9BSY9 194 aa16.62■□□□□ 0.25
PRKN-204ENST00000366896 GNL3LQ9NVN8 582 aaKnown RBP16.62■□□□□ 0.25
PRKN-204ENST00000366896 RBM28Q9NW13 759 aaKnown RBP16.62■□□□□ 0.25
PRKN-204ENST00000366896 RSPH14Q9UHP6 348 aa16.62■□□□□ 0.25
PRKN-204ENST00000366896 NOM1Q5C9Z4 860 aaKnown RBP16.61■□□□□ 0.25
PRKN-204ENST00000366896 SPATA1Q5VX52 437 aa16.61■□□□□ 0.25
PRKN-204ENST00000366896 APTXQ7Z2E3 356 aaKnown RBP16.61■□□□□ 0.25
PRKN-204ENST00000366896 SRGAP1Q7Z6B7 1085 aa16.61■□□□□ 0.25
PRKN-204ENST00000366896 C10orf67Q8IYJ2 551 aa16.61■□□□□ 0.25
PRKN-204ENST00000366896 ENAHQ8N8S7 591 aaPredicted RBP16.61■□□□□ 0.25
PRKN-204ENST00000366896 GSDMAQ96QA5 445 aa16.61■□□□□ 0.25
PRKN-204ENST00000366896 CTAGE1Q96RT6 745 aa16.61■□□□□ 0.25
PRKN-204ENST00000366896 RTFDC1Q9BY42 306 aaPredicted RBP16.61■□□□□ 0.25
PRKN-204ENST00000366896 ABCF2Q9UG63 623 aa16.61■□□□□ 0.25
PRKN-204ENST00000366896 COL1A1P02452 1464 aaPredicted RBP16.61■□□□□ 0.25
PRKN-204ENST00000366896 MYH6P13533 1939 aa16.61■□□□□ 0.25
PRKN-204ENST00000366896 MYH13Q9UKX3 1938 aa16.61■□□□□ 0.25
PRKN-204ENST00000366896 PLEKHA8P1O95397 391 aa16.61■□□□□ 0.25
PRKN-204ENST00000366896 CALM1P0DP23 149 aa16.61■□□□□ 0.25
PRKN-204ENST00000366896 CALM2P0DP24 149 aa16.61■□□□□ 0.25
PRKN-204ENST00000366896 CALM3P0DP25 149 aa16.61■□□□□ 0.25
PRKN-204ENST00000366896 CD44P16070 742 aaKnown RBP16.61■□□□□ 0.25
PRKN-204ENST00000366896 AFMP43652 599 aa16.61■□□□□ 0.25
PRKN-204ENST00000366896 USP5P45974 858 aa16.61■□□□□ 0.25
PRKN-204ENST00000366896 CHMP4BP1P59074 171 aa16.61■□□□□ 0.25
PRKN-204ENST00000366896 AKAP17AQ02040 695 aaKnown RBP16.61■□□□□ 0.25
PRKN-204ENST00000366896 MTF1Q14872 753 aa16.61■□□□□ 0.25
PRKN-204ENST00000366896 BEND6Q5SZJ8 279 aaPredicted RBP16.61■□□□□ 0.25
PRKN-204ENST00000366896 FHDC1Q9C0D6 1143 aaPredicted RBP16.61■□□□□ 0.25
PRKN-204ENST00000366896 KRT2P35908 639 aa16.6■□□□□ 0.25
PRKN-204ENST00000366896 PBX1P40424 430 aa16.6■□□□□ 0.25
PRKN-204ENST00000366896 ZNF804AQ7Z570 1209 aa16.6■□□□□ 0.25
PRKN-204ENST00000366896 PLCD3Q8N3E9 789 aa16.6■□□□□ 0.25
PRKN-204ENST00000366896 ANKZF1Q9H8Y5 726 aa16.6■□□□□ 0.25
PRKN-204ENST00000366896 RAB21Q9UL25 225 aa16.6■□□□□ 0.25
PRKN-204ENST00000366896 RRP15Q9Y3B9 282 aaKnown RBP16.6■□□□□ 0.25
PRKN-204ENST00000366896 MAGEB6P1A0A0J9YX57 407 aa16.6■□□□□ 0.25
PRKN-204ENST00000366896 TEX33O43247 280 aa16.6■□□□□ 0.25
PRKN-204ENST00000366896 STX17P56962 302 aa16.6■□□□□ 0.25
PRKN-204ENST00000366896 CUL4BQ13620 913 aa16.6■□□□□ 0.25
PRKN-204ENST00000366896 KARSQ15046 597 aaKnown RBP16.6■□□□□ 0.25
PRKN-204ENST00000366896 GRIPAP1Q4V328 841 aa16.6■□□□□ 0.25
PRKN-204ENST00000366896 CDKAL1Q5VV42 579 aa16.6■□□□□ 0.25
PRKN-204ENST00000366896 KLHL10Q6JEL2 608 aa16.6■□□□□ 0.25
PRKN-204ENST00000366896 PYM1Q9BRP8 204 aaKnown RBP16.6■□□□□ 0.25
PRKN-204ENST00000366896 MRPL44Q9H9J2 332 aaKnown RBP16.6■□□□□ 0.25
PRKN-204ENST00000366896 AKR1B15C9JRZ8 316 aaPredicted RBP16.59■□□□□ 0.25
PRKN-204ENST00000366896 FECHP22830 423 aa16.59■□□□□ 0.25
PRKN-204ENST00000366896 TNNT3P45378 269 aaPredicted RBP16.59■□□□□ 0.25
PRKN-204ENST00000366896 SMYD4Q8IYR2 804 aaPredicted RBP16.59■□□□□ 0.25
PRKN-204ENST00000366896 MSANTD4Q8NCY6 345 aa16.59■□□□□ 0.25
PRKN-204ENST00000366896 SYMPKQ92797 1274 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms