RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 STAT3P40763 770 aa14.01□□□□□ -0.17
MRPL55-213ENST00000366740 FAAP100Q0VG06 881 aa14.01□□□□□ -0.17
MRPL55-213ENST00000366740 CCSAPQ6IQ19 270 aaPredicted RBP14.01□□□□□ -0.17
MRPL55-213ENST00000366740 MSL3Q8N5Y2 521 aaKnown RBP14.01□□□□□ -0.17
MRPL55-213ENST00000366740 LENG1Q96BZ8 264 aaPredicted RBP14.01□□□□□ -0.17
MRPL55-213ENST00000366740 PAG1Q9NWQ8 432 aa14.01□□□□□ -0.17
MRPL55-213ENST00000366740 PTPRSQ13332 1948 aa14.01□□□□□ -0.17
MRPL55-213ENST00000366740 SYNGAP1Q96PV0 1343 aa14□□□□□ -0.17
MRPL55-213ENST00000366740 CHD9Q3L8U1 2897 aa14□□□□□ -0.17
MRPL55-213ENST00000366740 USP17L12C9JPN9 530 aa14□□□□□ -0.17
MRPL55-213ENST00000366740 USP17L21D6R901 530 aa14□□□□□ -0.17
MRPL55-213ENST00000366740 PQBP1O60828 265 aaKnown RBP14□□□□□ -0.17
MRPL55-213ENST00000366740 SLFNL1Q499Z3 407 aa14□□□□□ -0.17
MRPL55-213ENST00000366740 SAMD1Q6SPF0 538 aaPredicted RBP14□□□□□ -0.17
MRPL55-213ENST00000366740 MAMDC4Q6UXC1 1216 aa14□□□□□ -0.17
MRPL55-213ENST00000366740 KLHDC9Q8NEP7 349 aa14□□□□□ -0.17
MRPL55-213ENST00000366740 GOPCQ9HD26 462 aa14□□□□□ -0.17
MRPL55-213ENST00000366740 PRDM6Q9NQX0 595 aa14□□□□□ -0.17
MRPL55-213ENST00000366740 SUPT16HQ9Y5B9 1047 aaKnown RBP14□□□□□ -0.17
MRPL55-213ENST00000366740 REV3LO60673 3130 aa14□□□□□ -0.17
MRPL55-213ENST00000366740 NCOR1O75376 2440 aa13.99□□□□□ -0.17
MRPL55-213ENST00000366740 DNAJC25-GNG10A0A024R161 153 aa13.99□□□□□ -0.17
MRPL55-213ENST00000366740 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.99□□□□□ -0.17
MRPL55-213ENST00000366740 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.99□□□□□ -0.17
MRPL55-213ENST00000366740 MOXD2PA6NHM9 499 aa13.99□□□□□ -0.17
MRPL55-213ENST00000366740 ATP5JP18859 108 aa13.99□□□□□ -0.17
MRPL55-213ENST00000366740 DNAJB2P25686 324 aa13.99□□□□□ -0.17
MRPL55-213ENST00000366740 CST5P28325 142 aaPredicted RBP13.99□□□□□ -0.17
MRPL55-213ENST00000366740 ACLYP53396 1101 aa13.99□□□□□ -0.17
MRPL55-213ENST00000366740 UBE3CQ15386 1083 aa13.99□□□□□ -0.17
MRPL55-213ENST00000366740 FAM83BQ5T0W9 1011 aa13.99□□□□□ -0.17
MRPL55-213ENST00000366740 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.99□□□□□ -0.17
MRPL55-213ENST00000366740 AMOTL1Q8IY63 956 aa13.99□□□□□ -0.17
MRPL55-213ENST00000366740 SYMPKQ92797 1274 aaKnown RBP13.99□□□□□ -0.17
MRPL55-213ENST00000366740 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.99□□□□□ -0.17
MRPL55-213ENST00000366740 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.99□□□□□ -0.17
MRPL55-213ENST00000366740 BOLA2Q9H3K6 86 aa13.99□□□□□ -0.17
MRPL55-213ENST00000366740 STARD7Q9NQZ5 370 aa13.99□□□□□ -0.17
MRPL55-213ENST00000366740 TMEM39AQ9NV64 488 aa13.99□□□□□ -0.17
MRPL55-213ENST00000366740 TBX21Q9UL17 535 aa13.99□□□□□ -0.17
MRPL55-213ENST00000366740 CNPY2Q9Y2B0 182 aa13.99□□□□□ -0.17
MRPL55-213ENST00000366740 MYH6P13533 1939 aa13.99□□□□□ -0.17
MRPL55-213ENST00000366740 TRIP12Q14669 1992 aaPredicted RBP13.98□□□□□ -0.17
MRPL55-213ENST00000366740 MROH7Q68CQ1 1323 aa13.98□□□□□ -0.17
MRPL55-213ENST00000366740 DCDC2CA8MYV0 355 aa13.98□□□□□ -0.17
MRPL55-213ENST00000366740 SNAI1O95863 264 aaPredicted RBP13.98□□□□□ -0.17
MRPL55-213ENST00000366740 GRIN2CQ14957 1233 aa13.98□□□□□ -0.17
MRPL55-213ENST00000366740 CTR9Q6PD62 1173 aa13.98□□□□□ -0.17
MRPL55-213ENST00000366740 NUP133Q8WUM0 1156 aa13.98□□□□□ -0.17
MRPL55-213ENST00000366740 HAUS7Q99871 368 aa13.98□□□□□ -0.17
MRPL55-213ENST00000366740 TEX13BQ9BXU2 312 aa13.98□□□□□ -0.17
MRPL55-213ENST00000366740 ELP1O95163 1332 aa13.97□□□□□ -0.17
MRPL55-213ENST00000366740 ATP2A1O14983 1001 aa13.97□□□□□ -0.17
MRPL55-213ENST00000366740 DUSP11O75319 330 aaKnown RBP13.97□□□□□ -0.17
MRPL55-213ENST00000366740 TIMP1P01033 207 aa13.97□□□□□ -0.17
MRPL55-213ENST00000366740 CHGBP05060 677 aa13.97□□□□□ -0.17
MRPL55-213ENST00000366740 CDK7P50613 346 aa13.97□□□□□ -0.17
MRPL55-213ENST00000366740 RASIP1Q5U651 963 aa13.97□□□□□ -0.17
MRPL55-213ENST00000366740 ZNF467Q7Z7K2 595 aaPredicted RBP13.97□□□□□ -0.17
MRPL55-213ENST00000366740 USP38Q8NB14 1042 aa13.97□□□□□ -0.17
MRPL55-213ENST00000366740 EXOC6Q8TAG9 804 aa13.97□□□□□ -0.17
MRPL55-213ENST00000366740 DDRGK1Q96HY6 314 aa13.97□□□□□ -0.17
MRPL55-213ENST00000366740 SLF1Q9BQI6 1058 aa13.97□□□□□ -0.17
MRPL55-213ENST00000366740 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.97□□□□□ -0.171e-7■■■■□ 24.9
MRPL55-213ENST00000366740 ZNF576Q9H609 170 aa13.97□□□□□ -0.17
MRPL55-213ENST00000366740 ARPP21Q9UBL0 812 aaPredicted RBP13.97□□□□□ -0.17
MRPL55-213ENST00000366740 FAM184BQ9ULE4 1060 aa13.97□□□□□ -0.17
MRPL55-213ENST00000366740 RIPK3Q9Y572 518 aa13.97□□□□□ -0.17
MRPL55-213ENST00000366740 KIAA1217Q5T5P2 1943 aa13.96□□□□□ -0.17
MRPL55-213ENST00000366740 MYADML2A6NDP7 307 aa13.96□□□□□ -0.17
MRPL55-213ENST00000366740 ADCY6O43306 1168 aa13.96□□□□□ -0.17
MRPL55-213ENST00000366740 KCNA10Q16322 511 aa13.96□□□□□ -0.17
MRPL55-213ENST00000366740 TSHZ3Q63HK5 1081 aa13.96□□□□□ -0.17
MRPL55-213ENST00000366740 SNRNP48Q6IEG0 339 aaKnown RBP13.96□□□□□ -0.17
MRPL55-213ENST00000366740 MFSD5Q6N075 450 aa13.96□□□□□ -0.17
MRPL55-213ENST00000366740 OTUD7AQ8TE49 926 aaPredicted RBP13.96□□□□□ -0.17
MRPL55-213ENST00000366740 UPF3AQ9H1J1 476 aaKnown RBP13.96□□□□□ -0.17
MRPL55-213ENST00000366740 NYAP2Q9P242 653 aa13.96□□□□□ -0.17
MRPL55-213ENST00000366740 SLC4A4Q9Y6R1 1079 aa13.96□□□□□ -0.17
MRPL55-213ENST00000366740 TRANK1O15050 2925 aa13.96□□□□□ -0.18
MRPL55-213ENST00000366740 SCN10AQ9Y5Y9 1956 aa13.96□□□□□ -0.18
MRPL55-213ENST00000366740 CHD7Q9P2D1 2997 aa13.95□□□□□ -0.18
MRPL55-213ENST00000366740 RASA1P20936 1047 aa13.95□□□□□ -0.18
MRPL55-213ENST00000366740 PPIGQ13427 754 aaKnown RBP eCLIP13.95□□□□□ -0.186e-7■■■■□ 20.4
MRPL55-213ENST00000366740 HDAC1Q13547 482 aaPredicted RBP13.95□□□□□ -0.18
MRPL55-213ENST00000366740 SBK1Q52WX2 424 aa13.95□□□□□ -0.18
MRPL55-213ENST00000366740 TJAP1Q5JTD0 557 aa13.95□□□□□ -0.18
MRPL55-213ENST00000366740 C16orf59Q7L2K0 433 aa13.95□□□□□ -0.18
MRPL55-213ENST00000366740 PRPF38AQ8NAV1 312 aaKnown RBP13.95□□□□□ -0.18
MRPL55-213ENST00000366740 TIFAQ96CG3 184 aa13.95□□□□□ -0.18
MRPL55-213ENST00000366740 FGD4Q96M96 766 aa13.95□□□□□ -0.18
MRPL55-213ENST00000366740 GLT1D1Q96MS3 346 aa13.95□□□□□ -0.18
MRPL55-213ENST00000366740 NUP88Q99567 741 aaPredicted RBP13.95□□□□□ -0.18
MRPL55-213ENST00000366740 PUS7LQ9H0K6 701 aaKnown RBP13.95□□□□□ -0.18
MRPL55-213ENST00000366740 ECHDC1Q9NTX5 307 aa13.95□□□□□ -0.18
MRPL55-213ENST00000366740 ZHX1Q9UKY1 873 aaPredicted RBP13.95□□□□□ -0.18
MRPL55-213ENST00000366740 COL4A4P53420 1690 aaPredicted RBP13.95□□□□□ -0.18
MRPL55-213ENST00000366740 IGKV6D-41A0A0C4DH26 115 aa13.94□□□□□ -0.18
MRPL55-213ENST00000366740 F5H6K3 240 aa13.94□□□□□ -0.18
MRPL55-213ENST00000366740 NDUFB10O96000 172 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms