RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 PUM3Q15397 648 aaKnown RBP18.3■□□□□ 0.52
NID1-202ENST00000366595 SRGAP2BP0DMP2 458 aa18.3■□□□□ 0.52
NID1-202ENST00000366595 HSPA6P17066 643 aa18.3■□□□□ 0.52
NID1-202ENST00000366595 ECE1P42892 770 aa18.3■□□□□ 0.52
NID1-202ENST00000366595 BPIFB4P59827 614 aa18.3■□□□□ 0.52
NID1-202ENST00000366595 ABCB4P21439 1286 aa18.3■□□□□ 0.52
NID1-202ENST00000366595 EEF1GP26641 437 aaKnown RBP18.3■□□□□ 0.52
NID1-202ENST00000366595 TMED1Q13445 227 aa18.3■□□□□ 0.52
NID1-202ENST00000366595 PICK1Q9NRD5 415 aa18.3■□□□□ 0.52
NID1-202ENST00000366595 BABAM1Q9NWV8 329 aa18.3■□□□□ 0.52
NID1-202ENST00000366595 SCHIP1Q9P0W5 487 aaPredicted RBP18.3■□□□□ 0.52
NID1-202ENST00000366595 TRMT44Q8IYL2 757 aaKnown RBP18.29■□□□□ 0.52
NID1-202ENST00000366595 REXO1Q8N1G1 1221 aaKnown RBP18.29■□□□□ 0.52
NID1-202ENST00000366595 EXOC4Q96A65 974 aa18.29■□□□□ 0.52
NID1-202ENST00000366595 RTEL1Q9NZ71 1219 aa18.29■□□□□ 0.52
NID1-202ENST00000366595 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.29■□□□□ 0.52
NID1-202ENST00000366595 SERTAD1Q9UHV2 236 aa18.29■□□□□ 0.52
NID1-202ENST00000366595 ZNF148Q9UQR1 794 aa18.29■□□□□ 0.52
NID1-202ENST00000366595 ZBED4O75132 1171 aa18.29■□□□□ 0.52
NID1-202ENST00000366595 RPSAP08865 295 aaKnown RBP18.29■□□□□ 0.52
NID1-202ENST00000366595 LRRC8AQ8IWT6 810 aa18.29■□□□□ 0.52
NID1-202ENST00000366595 MAGEF1Q9HAY2 307 aa18.29■□□□□ 0.52
NID1-202ENST00000366595 RAPGEF3O95398 923 aa18.29■□□□□ 0.52
NID1-202ENST00000366595 CDC25BP30305 580 aa18.29■□□□□ 0.52
NID1-202ENST00000366595 YWHAGP61981 247 aaKnown RBP eCLIP18.29■□□□□ 0.52
NID1-202ENST00000366595 LCA5Q86VQ0 697 aa18.29■□□□□ 0.52
NID1-202ENST00000366595 SRRM1Q8IYB3 904 aaKnown RBP18.29■□□□□ 0.52
NID1-202ENST00000366595 TCP11Q8WWU5 503 aa18.29■□□□□ 0.52
NID1-202ENST00000366595 MAN1A2O60476 641 aa18.29■□□□□ 0.52
NID1-202ENST00000366595 BRD1O95696 1058 aa18.29■□□□□ 0.52
NID1-202ENST00000366595 IL1RL1Q01638 556 aa18.29■□□□□ 0.52
NID1-202ENST00000366595 GUCY2DQ02846 1103 aa18.29■□□□□ 0.52
NID1-202ENST00000366595 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.29■□□□□ 0.52
NID1-202ENST00000366595 TNNI3KQ59H18 835 aa18.29■□□□□ 0.52
NID1-202ENST00000366595 FNBP4Q8N3X1 1017 aaPredicted RBP18.29■□□□□ 0.52
NID1-202ENST00000366595 HESX1Q9UBX0 185 aa18.29■□□□□ 0.52
NID1-202ENST00000366595 FPGT-TNNI3KV9GXZ4 949 aa18.29■□□□□ 0.52
NID1-202ENST00000366595 PYGBP11216 843 aa18.28■□□□□ 0.52
NID1-202ENST00000366595 YARSP54577 528 aaKnown RBP18.28■□□□□ 0.52
NID1-202ENST00000366595 POMGNT1Q8WZA1 660 aa18.28■□□□□ 0.52
NID1-202ENST00000366595 ATP8A2Q9NTI2 1148 aa18.28■□□□□ 0.52
NID1-202ENST00000366595 POLE2P56282 527 aa18.28■□□□□ 0.52
NID1-202ENST00000366595 TRIM15Q9C019 465 aa18.28■□□□□ 0.52
NID1-202ENST00000366595 EPN1Q9Y6I3 576 aaPredicted RBP18.28■□□□□ 0.52
NID1-202ENST00000366595 TNNC2P02585 160 aa18.28■□□□□ 0.52
NID1-202ENST00000366595 SNX1Q13596 522 aa18.28■□□□□ 0.52
NID1-202ENST00000366595 MYSM1Q5VVJ2 828 aa18.28■□□□□ 0.52
NID1-202ENST00000366595 SPATA1Q5VX52 437 aa18.28■□□□□ 0.52
NID1-202ENST00000366595 BICC1Q9H694 974 aaKnown RBP18.28■□□□□ 0.52
NID1-202ENST00000366595 YY1AP1Q9H869 796 aa18.28■□□□□ 0.52
NID1-202ENST00000366595 RPRD2Q5VT52 1461 aaKnown RBP18.28■□□□□ 0.52
NID1-202ENST00000366595 CPA1P15085 419 aa18.28■□□□□ 0.52
NID1-202ENST00000366595 RCN2Q14257 317 aa18.28■□□□□ 0.52
NID1-202ENST00000366595 SEPT2Q15019 361 aa18.28■□□□□ 0.52
NID1-202ENST00000366595 DEPTORQ8TB45 409 aa18.28■□□□□ 0.52
NID1-202ENST00000366595 POLR3CQ9BUI4 534 aaPredicted RBP18.28■□□□□ 0.52
NID1-202ENST00000366595 ST7Q9NRC1 585 aa18.28■□□□□ 0.52
NID1-202ENST00000366595 TBC1D7Q9P0N9 293 aa18.28■□□□□ 0.52
NID1-202ENST00000366595 E9PMD0 336 aa18.28■□□□□ 0.52
NID1-202ENST00000366595 GPAA1O43292 621 aa18.28■□□□□ 0.52
NID1-202ENST00000366595 CREB3O43889 395 aa18.28■□□□□ 0.52
NID1-202ENST00000366595 PPARDQ03181 441 aa18.28■□□□□ 0.52
NID1-202ENST00000366595 OCA2Q04671 838 aa18.28■□□□□ 0.52
NID1-202ENST00000366595 NCOA5Q9HCD5 579 aaKnown RBP18.28■□□□□ 0.52
NID1-202ENST00000366595 MAP3K5Q99683 1374 aa18.27■□□□□ 0.52
NID1-202ENST00000366595 DISP3Q9P2K9 1392 aa18.27■□□□□ 0.52
NID1-202ENST00000366595 FRMD3A2A2Y4 597 aa18.27■□□□□ 0.52
NID1-202ENST00000366595 SPDYE16A6NNV3 312 aaPredicted RBP18.27■□□□□ 0.52
NID1-202ENST00000366595 CAPN9O14815 690 aa18.27■□□□□ 0.52
NID1-202ENST00000366595 SPDYE2Q495Y8 402 aa18.27■□□□□ 0.52
NID1-202ENST00000366595 PARP10Q53GL7 1025 aa18.27■□□□□ 0.52
NID1-202ENST00000366595 RBM17Q96I25 401 aaKnown RBP18.27■□□□□ 0.52
NID1-202ENST00000366595 PLCH2O75038 1416 aa18.27■□□□□ 0.52
NID1-202ENST00000366595 GTPBP6O43824 516 aaPredicted RBP18.27■□□□□ 0.52
NID1-202ENST00000366595 LPXNO60711 386 aa18.27■□□□□ 0.52
NID1-202ENST00000366595 GUCY2CP25092 1073 aa18.27■□□□□ 0.52
NID1-202ENST00000366595 SLC1A4P43007 532 aa18.27■□□□□ 0.52
NID1-202ENST00000366595 ZNF449Q6P9G9 518 aa18.27■□□□□ 0.52
NID1-202ENST00000366595 KRT82Q9NSB4 513 aa18.27■□□□□ 0.52
NID1-202ENST00000366595 PNOCQ13519 176 aa18.27■□□□□ 0.52
NID1-202ENST00000366595 TMTC4Q5T4D3 741 aa18.27■□□□□ 0.52
NID1-202ENST00000366595 ATG16L1Q676U5 607 aa18.27■□□□□ 0.52
NID1-202ENST00000366595 NLRX1Q86UT6 975 aa18.27■□□□□ 0.52
NID1-202ENST00000366595 CADPS2Q86UW7 1296 aa18.27■□□□□ 0.52
NID1-202ENST00000366595 BBS5Q8N3I7 341 aa18.27■□□□□ 0.52
NID1-202ENST00000366595 KBTBD3Q8NAB2 608 aa18.27■□□□□ 0.52
NID1-202ENST00000366595 UPF3AQ9H1J1 476 aaKnown RBP18.27■□□□□ 0.52
NID1-202ENST00000366595 ANAPC5Q9UJX4 755 aa18.27■□□□□ 0.52
NID1-202ENST00000366595 GSTA4O15217 222 aa18.27■□□□□ 0.51
NID1-202ENST00000366595 CDC37L1Q7L3B6 337 aa18.27■□□□□ 0.51
NID1-202ENST00000366595 IVNS1ABPQ9Y6Y0 642 aa18.27■□□□□ 0.51
NID1-202ENST00000366595 ARHGEF9O43307 516 aa18.26■□□□□ 0.51
NID1-202ENST00000366595 PFKFB1P16118 471 aa18.26■□□□□ 0.51
NID1-202ENST00000366595 HOXA7P31268 230 aaPredicted RBP18.26■□□□□ 0.51
NID1-202ENST00000366595 DYNC1I2Q13409 638 aaKnown RBP18.26■□□□□ 0.51
NID1-202ENST00000366595 GALNT17Q6IS24 598 aa18.26■□□□□ 0.51
NID1-202ENST00000366595 NME8Q8N427 588 aa18.26■□□□□ 0.51
NID1-202ENST00000366595 GIPC2Q8TF65 315 aa18.26■□□□□ 0.51
NID1-202ENST00000366595 TSC22D3Q99576 134 aa18.26■□□□□ 0.51
NID1-202ENST00000366595 CLEC11AQ9Y240 323 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms