RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 PRPF40BQ6NWY9 871 aaKnown RBP1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 WAPLQ7Z5K2 1190 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 B3GNT8Q7Z7M8 397 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 C12orf40Q86WS4 652 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 HID1Q8IV36 788 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 DTWD2Q8NBA8 298 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 IGDCC4Q8TDY8 1250 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 DDX11Q96FC9 970 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 PRIMPOLQ96LW4 560 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 G6PC3Q9BUM1 346 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 CBX8Q9HC52 389 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 TNFRSF12AQ9NP84 129 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 JADE2Q9NQC1 790 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 PPP4R1LQ9P1A2 415 aa1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 ACIN1Q9UKV3 1341 aaKnown RBP1.07□□□□□ -2.24
RNU6-54P-201ENST00000365563 PATE3B3GLJ2 98 aa1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 ZNF623O75123 536 aa1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 POLR3DP05423 398 aaPredicted RBP1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 CBSLP0DN79 551 aa1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 PRKCAP17252 672 aa1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 CBSP35520 551 aa1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 SCRN1Q12765 414 aa1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 AAMPQ13685 434 aa1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 OCLNQ16625 522 aa1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 PRAMEF13Q5VWM6 474 aa1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 DTHD1Q6ZMT9 781 aa1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 ARHGEF18Q6ZSZ5 1173 aa1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 HDXQ7Z353 690 aa1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 CDH24Q86UP0 819 aa1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 ZNF483Q8TF39 744 aaPredicted RBP1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 XAGE3Q8WTP9 111 aa1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 Q96M66 194 aa1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 NELL2Q99435 816 aa1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 ASCC2Q9H1I8 757 aaPredicted RBP1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 PCDH18Q9HCL0 1135 aa1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 ABCB6Q9NP58 842 aa1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 CXXC1Q9P0U4 656 aaPredicted RBP1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 TFIP11Q9UBB9 837 aaKnown RBP1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 TNFRSF10DQ9UBN6 386 aa1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 EBF1Q9UH73 591 aa1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 POLIQ9UNA4 740 aa1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 COG6Q9Y2V7 657 aa1.06□□□□□ -2.24
RNU6-54P-201ENST00000365563 TMEM238LA0A1B0GVL6 79 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 A0A1W2PQ27 194 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 A0A1W2PQ64 194 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 A0A1W2PQC6 194 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 A0A1W2PQD8 194 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 A0A1W2PQJ5 194 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 RBM47A0AV96 593 aaKnown RBP1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 TMEM191CA6NGB0 347 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 C9orf118A6NHY6 69 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 GPR42O15529 346 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 SRGAP3O43295 1099 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 EFEMP2O95967 443 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 NUDT3O95989 172 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 CYBBP04839 570 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 XRCC5P13010 732 aaKnown RBP1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 EPHB4P54760 987 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 PCBP3P57721 371 aaKnown RBP1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 ZNF252P-AS1Q0IIN9 211 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 MCM6Q14566 821 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 GRM7Q14831 915 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 LRRC14Q15048 493 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 HSF5Q4G112 596 aaPredicted RBP1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 USP39Q53GS9 565 aaKnown RBP1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 KANK4Q5T7N3 995 aaPredicted RBP1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 SLFN13Q68D06 897 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 PAQR3Q6TCH7 311 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 NUP43Q8NFH3 380 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 RIN3Q8TB24 985 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 HELQQ8TDG4 1101 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 ADAMTS19Q8TE59 1207 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 HHIPL1Q96JK4 782 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 LCORQ96JN0 433 aaPredicted RBP1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 FCRL2Q96LA5 508 aaPredicted RBP1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 PLCD4Q9BRC7 762 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 WNT10AQ9GZT5 417 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 FBRSQ9HAH7 460 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 PPP4R2Q9NY27 417 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 CACNA2D2Q9NY47 1150 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 DBR1Q9UK59 544 aaKnown RBP1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 PCDHA4Q9UN74 947 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 ZNF281Q9Y2X9 895 aa1.05□□□□□ -2.24
RNU6-54P-201ENST00000365563 A0A1W2PQ45 241 aaPredicted RBP1.04□□□□□ -2.24
RNU6-54P-201ENST00000365563 A0A1W2PQY0 241 aa1.04□□□□□ -2.24
RNU6-54P-201ENST00000365563 POM121CA8CG34 1229 aa1.04□□□□□ -2.24
RNU6-54P-201ENST00000365563 GADD45BO75293 160 aaPredicted RBP1.04□□□□□ -2.24
RNU6-54P-201ENST00000365563 ATF2P15336 505 aa1.04□□□□□ -2.24
RNU6-54P-201ENST00000365563 RPL13P26373 211 aaKnown RBP1.04□□□□□ -2.24
RNU6-54P-201ENST00000365563 EIF1AXP47813 144 aaKnown RBP1.04□□□□□ -2.24
RNU6-54P-201ENST00000365563 CEBPAP49715 358 aaPredicted RBP1.04□□□□□ -2.24
RNU6-54P-201ENST00000365563 PPP2CBP62714 309 aa1.04□□□□□ -2.24
RNU6-54P-201ENST00000365563 PPP2CAP67775 309 aa1.04□□□□□ -2.24
RNU6-54P-201ENST00000365563 NKG7Q16617 165 aa1.04□□□□□ -2.24
RNU6-54P-201ENST00000365563 IGFL4Q6B9Z1 124 aa1.04□□□□□ -2.24
RNU6-54P-201ENST00000365563 LLGL2Q6P1M3 1020 aa1.04□□□□□ -2.24
RNU6-54P-201ENST00000365563 PRIMA1Q86XR5 153 aa1.04□□□□□ -2.24
RNU6-54P-201ENST00000365563 ENOX1Q8TC92 643 aaKnown RBP1.04□□□□□ -2.24
RNU6-54P-201ENST00000365563 RNF141Q8WVD5 230 aa1.04□□□□□ -2.24
RNU6-54P-201ENST00000365563 ALG3Q92685 438 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms