RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 CTSKP43235 329 aa6.72□□□□□ -1.33
RNU6-553P-201ENST00000364047 GNPTABQ3T906 1256 aa6.72□□□□□ -1.33
RNU6-553P-201ENST00000364047 TIGD5Q53EQ6 642 aa6.72□□□□□ -1.33
RNU6-553P-201ENST00000364047 ANKRD39Q53RE8 183 aa6.72□□□□□ -1.33
RNU6-553P-201ENST00000364047 ZNF648Q5T619 568 aaPredicted RBP6.72□□□□□ -1.33
RNU6-553P-201ENST00000364047 LILRA2Q8N149 483 aa6.72□□□□□ -1.33
RNU6-553P-201ENST00000364047 ANAPC16Q96DE5 110 aa6.72□□□□□ -1.33
RNU6-553P-201ENST00000364047 RNF32Q9H0A6 362 aa6.72□□□□□ -1.33
RNU6-553P-201ENST00000364047 PHAXQ9H814 394 aaKnown RBP6.72□□□□□ -1.33
RNU6-553P-201ENST00000364047 SP110Q9HB58 689 aa6.72□□□□□ -1.33
RNU6-553P-201ENST00000364047 GP6Q9HCN6 339 aa6.72□□□□□ -1.33
RNU6-553P-201ENST00000364047 PCDHB10Q9UN67 800 aa6.72□□□□□ -1.33
RNU6-553P-201ENST00000364047 KRTAP9-6A0A140TA67 174 aa6.71□□□□□ -1.34
RNU6-553P-201ENST00000364047 USP2O75604 605 aaPredicted RBP6.71□□□□□ -1.34
RNU6-553P-201ENST00000364047 GSNP06396 782 aa6.71□□□□□ -1.34
RNU6-553P-201ENST00000364047 BMP8BP34820 402 aa6.71□□□□□ -1.34
RNU6-553P-201ENST00000364047 GNL2Q13823 731 aaKnown RBP6.71□□□□□ -1.34
RNU6-553P-201ENST00000364047 NR0B2Q15466 257 aa6.71□□□□□ -1.34
RNU6-553P-201ENST00000364047 ZPBP2Q6X784 338 aa6.71□□□□□ -1.34
RNU6-553P-201ENST00000364047 PRR23BQ6ZRT6 265 aa6.71□□□□□ -1.34
RNU6-553P-201ENST00000364047 VPS37DQ86XT2 251 aa6.71□□□□□ -1.34
RNU6-553P-201ENST00000364047 BRF1Q92994 677 aa6.71□□□□□ -1.34
RNU6-553P-201ENST00000364047 MAP6Q96JE9 813 aa6.71□□□□□ -1.34
RNU6-553P-201ENST00000364047 KRTAP4-12Q9BQ66 201 aa6.71□□□□□ -1.34
RNU6-553P-201ENST00000364047 CDADC1Q9BWV3 514 aa6.71□□□□□ -1.34
RNU6-553P-201ENST00000364047 GPR160Q9UJ42 338 aa6.71□□□□□ -1.34
RNU6-553P-201ENST00000364047 ZNF451Q9Y4E5 1061 aa6.71□□□□□ -1.34
RNU6-553P-201ENST00000364047 H0Y8X5 98 aa6.7□□□□□ -1.34
RNU6-553P-201ENST00000364047 ZNF205O95201 554 aa6.7□□□□□ -1.34
RNU6-553P-201ENST00000364047 ITGA4P13612 1032 aa6.7□□□□□ -1.34
RNU6-553P-201ENST00000364047 VAV1P15498 845 aa6.7□□□□□ -1.34
RNU6-553P-201ENST00000364047 CD247P20963 164 aa6.7□□□□□ -1.34
RNU6-553P-201ENST00000364047 ENDOUP21128 410 aaKnown RBP6.7□□□□□ -1.34
RNU6-553P-201ENST00000364047 ZNF445P59923 1031 aa6.7□□□□□ -1.34
RNU6-553P-201ENST00000364047 SLC7A5Q01650 507 aa6.7□□□□□ -1.34
RNU6-553P-201ENST00000364047 TCEAL1Q15170 157 aa6.7□□□□□ -1.34
RNU6-553P-201ENST00000364047 CWF19L1Q69YN2 538 aaKnown RBP6.7□□□□□ -1.34
RNU6-553P-201ENST00000364047 FAM169BQ8N8A8 192 aa6.7□□□□□ -1.34
RNU6-553P-201ENST00000364047 HHIPL1Q96JK4 782 aa6.7□□□□□ -1.34
RNU6-553P-201ENST00000364047 FCRL2Q96LA5 508 aaPredicted RBP6.7□□□□□ -1.34
RNU6-553P-201ENST00000364047 DIRC2Q96SL1 478 aa6.7□□□□□ -1.34
RNU6-553P-201ENST00000364047 HAUS7Q99871 368 aa6.7□□□□□ -1.34
RNU6-553P-201ENST00000364047 NSUN3Q9H649 340 aaKnown RBP6.7□□□□□ -1.34
RNU6-553P-201ENST00000364047 FHOD1Q9Y613 1164 aa6.7□□□□□ -1.34
RNU6-553P-201ENST00000364047 CBFA2T2O43439 604 aa6.69□□□□□ -1.34
RNU6-553P-201ENST00000364047 C8AP07357 584 aa6.69□□□□□ -1.34
RNU6-553P-201ENST00000364047 SLC14A2Q15849 920 aa6.69□□□□□ -1.34
RNU6-553P-201ENST00000364047 CEP128Q6ZU80 1094 aa6.69□□□□□ -1.34
RNU6-553P-201ENST00000364047 FIBCD1Q8N539 461 aa6.69□□□□□ -1.34
RNU6-553P-201ENST00000364047 E9PSI1 815 aa6.68□□□□□ -1.34
RNU6-553P-201ENST00000364047 PSPNO60542 156 aa6.68□□□□□ -1.34
RNU6-553P-201ENST00000364047 SSBP05455 408 aaKnown RBP eCLIP6.68□□□□□ -1.34
RNU6-553P-201ENST00000364047 KIR2DL1P43626 348 aaPredicted RBP6.68□□□□□ -1.34
RNU6-553P-201ENST00000364047 KIR2DL2P43627 348 aaPredicted RBP6.68□□□□□ -1.34
RNU6-553P-201ENST00000364047 CASP7P55210 303 aa6.68□□□□□ -1.34
RNU6-553P-201ENST00000364047 SNX17Q15036 470 aa6.68□□□□□ -1.34
RNU6-553P-201ENST00000364047 HEATR6Q6AI08 1181 aaKnown RBP6.68□□□□□ -1.34
RNU6-553P-201ENST00000364047 KSR1Q8IVT5 923 aa6.68□□□□□ -1.34
RNU6-553P-201ENST00000364047 SLC38A3Q99624 504 aa6.68□□□□□ -1.34
RNU6-553P-201ENST00000364047 NOL6Q9H6R4 1146 aaKnown RBP6.68□□□□□ -1.34
RNU6-553P-201ENST00000364047 CWC22Q9HCG8 908 aaKnown RBP6.68□□□□□ -1.34
RNU6-553P-201ENST00000364047 AP5S1Q9NUS5 200 aa6.68□□□□□ -1.34
RNU6-553P-201ENST00000364047 WHRNQ9P202 907 aa6.68□□□□□ -1.34
RNU6-553P-201ENST00000364047 SF3B6Q9Y3B4 125 aaKnown RBP6.68□□□□□ -1.34
RNU6-553P-201ENST00000364047 MRVI1Q9Y6F6 885 aa6.68□□□□□ -1.34
RNU6-553P-201ENST00000364047 NOTOA8MTQ0 251 aa6.67□□□□□ -1.34
RNU6-553P-201ENST00000364047 GSTM1P09488 218 aa6.67□□□□□ -1.34
RNU6-553P-201ENST00000364047 GALK1P51570 392 aa6.67□□□□□ -1.34
RNU6-553P-201ENST00000364047 MESP2Q0VG99 397 aa6.67□□□□□ -1.34
RNU6-553P-201ENST00000364047 PKN1Q16512 942 aa6.67□□□□□ -1.34
RNU6-553P-201ENST00000364047 RTP2Q5QGT7 225 aa6.67□□□□□ -1.34
RNU6-553P-201ENST00000364047 VHLLQ6RSH7 139 aa6.67□□□□□ -1.34
RNU6-553P-201ENST00000364047 ADAT2Q7Z6V5 191 aaKnown RBP6.67□□□□□ -1.34
RNU6-553P-201ENST00000364047 KRTAP19-1Q8IUB9 90 aa6.67□□□□□ -1.34
RNU6-553P-201ENST00000364047 ADCY4Q8NFM4 1077 aa6.67□□□□□ -1.34
RNU6-553P-201ENST00000364047 KLHL6Q8WZ60 621 aa6.67□□□□□ -1.34
RNU6-553P-201ENST00000364047 FAM84AQ96KN4 292 aa6.67□□□□□ -1.34
RNU6-553P-201ENST00000364047 ZDHHC15Q96MV8 337 aa6.67□□□□□ -1.34
RNU6-553P-201ENST00000364047 SLC12A9Q9BXP2 914 aa6.67□□□□□ -1.34
RNU6-553P-201ENST00000364047 KLHL25Q9H0H3 589 aa6.67□□□□□ -1.34
RNU6-553P-201ENST00000364047 GBP3Q9H0R5 595 aa6.67□□□□□ -1.34
RNU6-553P-201ENST00000364047 SLC6A17Q9H1V8 727 aa6.67□□□□□ -1.34
RNU6-553P-201ENST00000364047 EPB41L4BQ9H329 900 aa6.67□□□□□ -1.34
RNU6-553P-201ENST00000364047 DCP1AQ9NPI6 582 aaPredicted RBP6.67□□□□□ -1.34
RNU6-553P-201ENST00000364047 ERVK13-1Q9NX77 482 aa6.67□□□□□ -1.34
RNU6-553P-201ENST00000364047 TNFRSF10DQ9UBN6 386 aa6.67□□□□□ -1.34
RNU6-553P-201ENST00000364047 GPR55Q9Y2T6 319 aaPredicted RBP6.67□□□□□ -1.34
RNU6-553P-201ENST00000364047 YBX2Q9Y2T7 364 aaKnown RBP6.67□□□□□ -1.34
RNU6-553P-201ENST00000364047 NRDCO43847 1150 aa6.66□□□□□ -1.34
RNU6-553P-201ENST00000364047 EPHX1P07099 455 aa6.66□□□□□ -1.34
RNU6-553P-201ENST00000364047 YBX3P16989 372 aaKnown RBP eCLIP6.66□□□□□ -1.34
RNU6-553P-201ENST00000364047 RTP1P59025 263 aa6.66□□□□□ -1.34
RNU6-553P-201ENST00000364047 PPP2R5DQ14738 602 aa6.66□□□□□ -1.34
RNU6-553P-201ENST00000364047 KIAA1211LQ6NV74 962 aa6.66□□□□□ -1.34
RNU6-553P-201ENST00000364047 SIRT2Q8IXJ6 389 aa6.66□□□□□ -1.34
RNU6-553P-201ENST00000364047 NAT16Q8N8M0 369 aa6.66□□□□□ -1.34
RNU6-553P-201ENST00000364047 SHISA4Q96DD7 197 aa6.66□□□□□ -1.34
RNU6-553P-201ENST00000364047 INTS4Q96HW7 963 aaKnown RBP6.66□□□□□ -1.34
RNU6-553P-201ENST00000364047 FGD4Q96M96 766 aa6.66□□□□□ -1.34
RNU6-553P-201ENST00000364047 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms