RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 MAPKAPK2P49137 400 aa4.54□□□□□ -1.68
RNU6-238P-201ENST00000363313 CYP4F8P98187 520 aa4.54□□□□□ -1.68
RNU6-238P-201ENST00000363313 LMNB2Q03252 620 aa4.54□□□□□ -1.68
RNU6-238P-201ENST00000363313 RAB3GAP1Q15042 981 aa4.54□□□□□ -1.68
RNU6-238P-201ENST00000363313 HSF5Q4G112 596 aaPredicted RBP4.54□□□□□ -1.68
RNU6-238P-201ENST00000363313 UBXN11Q5T124 520 aa4.54□□□□□ -1.68
RNU6-238P-201ENST00000363313 PHC3Q8NDX5 983 aa4.54□□□□□ -1.68
RNU6-238P-201ENST00000363313 JARID2Q92833 1246 aaPredicted RBP4.54□□□□□ -1.68
RNU6-238P-201ENST00000363313 REV1Q9UBZ9 1251 aa4.54□□□□□ -1.68
RNU6-238P-201ENST00000363313 TAF6LQ9Y6J9 622 aa4.54□□□□□ -1.68
RNU6-238P-201ENST00000363313 CHURC1-FNTBB4DL54 471 aa4.53□□□□□ -1.68
RNU6-238P-201ENST00000363313 SUV39H1O43463 412 aa4.53□□□□□ -1.68
RNU6-238P-201ENST00000363313 PRICKLE3O43900 615 aaPredicted RBP4.53□□□□□ -1.68
RNU6-238P-201ENST00000363313 GBP1P32455 592 aa4.53□□□□□ -1.68
RNU6-238P-201ENST00000363313 NBPF9Q3BBW0 867 aa4.53□□□□□ -1.68
RNU6-238P-201ENST00000363313 BBS9Q3SYG4 887 aa4.53□□□□□ -1.68
RNU6-238P-201ENST00000363313 TMC6Q7Z403 805 aa4.53□□□□□ -1.68
RNU6-238P-201ENST00000363313 CRELD1Q96HD1 420 aa4.53□□□□□ -1.68
RNU6-238P-201ENST00000363313 PLCD4Q9BRC7 762 aa4.53□□□□□ -1.68
RNU6-238P-201ENST00000363313 TNFRSF12AQ9NP84 129 aa4.53□□□□□ -1.68
RNU6-238P-201ENST00000363313 SH3D21A4FU49 640 aa4.52□□□□□ -1.69
RNU6-238P-201ENST00000363313 AKAP8O43823 692 aaKnown RBP4.52□□□□□ -1.69
RNU6-238P-201ENST00000363313 HTR3BO95264 441 aa4.52□□□□□ -1.69
RNU6-238P-201ENST00000363313 SYPP08247 313 aa4.52□□□□□ -1.69
RNU6-238P-201ENST00000363313 CCNFP41002 786 aa4.52□□□□□ -1.69
RNU6-238P-201ENST00000363313 TAF1CQ15572 869 aaPredicted RBP4.52□□□□□ -1.69
RNU6-238P-201ENST00000363313 SLCO6A1Q86UG4 719 aa4.52□□□□□ -1.69
RNU6-238P-201ENST00000363313 PHACTR4Q8IZ21 702 aa4.52□□□□□ -1.69
RNU6-238P-201ENST00000363313 TTC9BQ8N6N2 239 aa4.52□□□□□ -1.69
RNU6-238P-201ENST00000363313 C1QTNF3Q9BXJ4 246 aa4.52□□□□□ -1.69
RNU6-238P-201ENST00000363313 PRR13Q9NZ81 148 aa4.52□□□□□ -1.69
RNU6-238P-201ENST00000363313 SIGLEC6O43699 453 aa4.51□□□□□ -1.69
RNU6-238P-201ENST00000363313 P4HBP07237 508 aaKnown RBP4.51□□□□□ -1.69
RNU6-238P-201ENST00000363313 TNFRSF1AP19438 455 aa4.51□□□□□ -1.69
RNU6-238P-201ENST00000363313 ZXDAP98168 799 aa4.51□□□□□ -1.69
RNU6-238P-201ENST00000363313 CAMK2GQ13555 558 aaPredicted RBP4.51□□□□□ -1.69
RNU6-238P-201ENST00000363313 MAP3K11Q16584 847 aa4.51□□□□□ -1.69
RNU6-238P-201ENST00000363313 NBPF12Q5TAG4 269 aaPredicted RBP4.51□□□□□ -1.69
RNU6-238P-201ENST00000363313 ZC3H14Q6PJT7 736 aaKnown RBP4.51□□□□□ -1.69
RNU6-238P-201ENST00000363313 AEBP1Q8IUX7 1158 aa4.51□□□□□ -1.69
RNU6-238P-201ENST00000363313 RETREG2Q8NC44 543 aa4.51□□□□□ -1.69
RNU6-238P-201ENST00000363313 RNF38Q9H0F5 515 aa4.51□□□□□ -1.69
RNU6-238P-201ENST00000363313 USP40Q9NVE5 1235 aa4.51□□□□□ -1.69
RNU6-238P-201ENST00000363313 SRRDQ9UH36 339 aa4.51□□□□□ -1.69
RNU6-238P-201ENST00000363313 ROBO2Q9HCK4 1378 aa4.51□□□□□ -1.69
RNU6-238P-201ENST00000363313 ITGB3P05106 788 aa4.5□□□□□ -1.69
RNU6-238P-201ENST00000363313 MSL3P1P0C860 447 aa4.5□□□□□ -1.69
RNU6-238P-201ENST00000363313 PRKCAP17252 672 aa4.5□□□□□ -1.69
RNU6-238P-201ENST00000363313 SDHBP21912 280 aa4.5□□□□□ -1.69
RNU6-238P-201ENST00000363313 BMP8BP34820 402 aa4.5□□□□□ -1.69
RNU6-238P-201ENST00000363313 ADAM17P78536 824 aa4.5□□□□□ -1.69
RNU6-238P-201ENST00000363313 PWP1Q13610 501 aa4.5□□□□□ -1.69
RNU6-238P-201ENST00000363313 MPP2Q14168 576 aa4.5□□□□□ -1.69
RNU6-238P-201ENST00000363313 VWA3BQ502W6 1294 aa4.5□□□□□ -1.69
RNU6-238P-201ENST00000363313 LIPIQ6XZB0 460 aa4.5□□□□□ -1.69
RNU6-238P-201ENST00000363313 SAPCD2Q86UD0 394 aa4.5□□□□□ -1.69
RNU6-238P-201ENST00000363313 KIF2CQ99661 725 aa4.5□□□□□ -1.69
RNU6-238P-201ENST00000363313 TLR6Q9Y2C9 796 aa4.5□□□□□ -1.69
RNU6-238P-201ENST00000363313 USP31Q70CQ4 1352 aa4.5□□□□□ -1.69
RNU6-238P-201ENST00000363313 SRGAP3O43295 1099 aa4.49□□□□□ -1.69
RNU6-238P-201ENST00000363313 ZNF205O95201 554 aa4.49□□□□□ -1.69
RNU6-238P-201ENST00000363313 CYBBP04839 570 aa4.49□□□□□ -1.69
RNU6-238P-201ENST00000363313 HTRA3P83110 453 aa4.49□□□□□ -1.69
RNU6-238P-201ENST00000363313 CPZQ66K79 652 aa4.49□□□□□ -1.69
RNU6-238P-201ENST00000363313 PAQR3Q6TCH7 311 aa4.49□□□□□ -1.69
RNU6-238P-201ENST00000363313 RPTNQ6XPR3 784 aa4.49□□□□□ -1.69
RNU6-238P-201ENST00000363313 BNC2Q6ZN30 1099 aaPredicted RBP4.49□□□□□ -1.69
RNU6-238P-201ENST00000363313 FNIP1Q8TF40 1166 aa4.49□□□□□ -1.69
RNU6-238P-201ENST00000363313 SAMD11Q96NU1 681 aa4.49□□□□□ -1.69
RNU6-238P-201ENST00000363313 RSRP1Q9BUV0 290 aa4.49□□□□□ -1.69
RNU6-238P-201ENST00000363313 KLHL3Q9UH77 587 aa4.49□□□□□ -1.69
RNU6-238P-201ENST00000363313 GPR55Q9Y2T6 319 aaPredicted RBP4.49□□□□□ -1.69
RNU6-238P-201ENST00000363313 NUDT19A8MXV4 375 aa4.48□□□□□ -1.69
RNU6-238P-201ENST00000363313 UBOX5O94941 541 aa4.48□□□□□ -1.69
RNU6-238P-201ENST00000363313 ATE1O95260 518 aa4.48□□□□□ -1.69
RNU6-238P-201ENST00000363313 F13A1P00488 732 aa4.48□□□□□ -1.69
RNU6-238P-201ENST00000363313 RBM10P98175 930 aaKnown RBP4.48□□□□□ -1.69
RNU6-238P-201ENST00000363313 FOXO4P98177 505 aa4.48□□□□□ -1.69
RNU6-238P-201ENST00000363313 PLEKHN1Q494U1 663 aaPredicted RBP4.48□□□□□ -1.69
RNU6-238P-201ENST00000363313 NT5DC1Q5TFE4 455 aa4.48□□□□□ -1.69
RNU6-238P-201ENST00000363313 CDCP2Q5VXM1 449 aa4.48□□□□□ -1.69
RNU6-238P-201ENST00000363313 TMC3Q7Z5M5 1100 aa4.48□□□□□ -1.69
RNU6-238P-201ENST00000363313 NUP43Q8NFH3 380 aa4.48□□□□□ -1.69
RNU6-238P-201ENST00000363313 SORCS2Q96PQ0 1159 aa4.48□□□□□ -1.69
RNU6-238P-201ENST00000363313 RBM15Q96T37 977 aaKnown RBP eCLIP4.48□□□□□ -1.69
RNU6-238P-201ENST00000363313 ERVK13-1Q9NX77 482 aa4.48□□□□□ -1.69
RNU6-238P-201ENST00000363313 SMPD4Q9NXE4 827 aa4.48□□□□□ -1.69
RNU6-238P-201ENST00000363313 SUSD2Q9UGT4 822 aa4.48□□□□□ -1.69
RNU6-238P-201ENST00000363313 POLR3KQ9Y2Y1 108 aaPredicted RBP4.48□□□□□ -1.69
RNU6-238P-201ENST00000363313 MATN3O15232 486 aa4.47□□□□□ -1.69
RNU6-238P-201ENST00000363313 NOBOXO60393 691 aa4.47□□□□□ -1.69
RNU6-238P-201ENST00000363313 PRAMEF1O95521 474 aa4.47□□□□□ -1.69
RNU6-238P-201ENST00000363313 RAG1P15918 1043 aa4.47□□□□□ -1.69
RNU6-238P-201ENST00000363313 FBLN1P23142 703 aa4.47□□□□□ -1.69
RNU6-238P-201ENST00000363313 CORO7P57737 925 aa4.47□□□□□ -1.69
RNU6-238P-201ENST00000363313 HLA-DQA1Q5Y7H0 255 aa4.47□□□□□ -1.69
RNU6-238P-201ENST00000363313 REC114Q7Z4M0 266 aa4.47□□□□□ -1.69
RNU6-238P-201ENST00000363313 RELL1Q8IUW5 271 aa4.47□□□□□ -1.69
RNU6-238P-201ENST00000363313 RHOVQ96L33 236 aa4.47□□□□□ -1.69
RNU6-238P-201ENST00000363313 CHST7Q9NS84 486 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms