RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 SCAND2PQ9GZW5 306 aaPredicted RBP3.29□□□□□ -1.88
LTN1-201ENST00000361371 CSRNP2Q9H175 543 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 DNAJC25Q9H1X3 360 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 EMILIN3Q9NT22 766 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 SERTAD1Q9UHV2 236 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 PRR12Q9ULL5 1215 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 NAPAP54920 295 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 ZRSR1Q15695 479 aaKnown RBP3.29□□□□□ -1.88
LTN1-201ENST00000361371 LETM2Q2VYF4 491 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 FCHSD1Q86WN1 690 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 BLIDQ8IZY5 108 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 SLC37A4O43826 429 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 PTPREP23469 700 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 HMGCS2P54868 508 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 AKAP17AQ02040 695 aaKnown RBP3.29□□□□□ -1.88
LTN1-201ENST00000361371 PTGDRQ13258 359 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 TNIP1Q15025 636 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 CDC37Q16543 378 aaPredicted RBP3.29□□□□□ -1.88
LTN1-201ENST00000361371 TMEM179Q6ZVK1 233 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 KCNK18Q7Z418 384 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 WRNIP1Q96S55 665 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 ZNF341Q9BYN7 854 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 ZSCAN16Q9H4T2 348 aaPredicted RBP3.29□□□□□ -1.88
LTN1-201ENST00000361371 GRPEL1Q9HAV7 217 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 CCDC196A0A1B0GTZ2 297 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 YEATS4O95619 227 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 DPYDQ12882 1025 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 IKQ13123 557 aaPredicted RBP3.29□□□□□ -1.88
LTN1-201ENST00000361371 TRIM29Q14134 588 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 IL31RAQ8NI17 732 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 ATG4CQ96DT6 458 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 KLRG1Q96E93 195 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 CCDC17Q96LX7 622 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 ZNF408Q9H9D4 720 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 HOMER2Q9NSB8 354 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 BARHL2Q9NY43 387 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 SBF2Q86WG5 1849 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 STK36Q9NRP7 1315 aa3.29□□□□□ -1.88
LTN1-201ENST00000361371 COL11A2P13942 1736 aaPredicted RBP3.28□□□□□ -1.88
LTN1-201ENST00000361371 SLX4Q8IY92 1834 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 VWA3AA6NCI4 1184 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 GOLGA6L4A6NEF3 574 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 CDKL5O76039 1030 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 CALM1P0DP23 149 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 CALM2P0DP24 149 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 CALM3P0DP25 149 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 PCP11498 1178 aaKnown RBP3.28□□□□□ -1.88
LTN1-201ENST00000361371 GNL2Q13823 731 aaKnown RBP3.28□□□□□ -1.88
LTN1-201ENST00000361371 TRMT1LQ7Z2T5 733 aaKnown RBP3.28□□□□□ -1.88
LTN1-201ENST00000361371 TBCKQ8TEA7 893 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 EEF2KMTQ96G04 330 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 SPZ1Q9BXG8 430 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 POLR3EQ9NVU0 708 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 USP25Q9UHP3 1055 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 TMX2Q9Y320 296 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 PCDHA5Q9Y5H7 936 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 PCDHA1Q9Y5I3 950 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 NID2Q14112 1375 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 GOLGA6L3A6NEY3 463 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 MEIS2O14770 477 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 PTPRAP18433 802 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 MAP3K10Q02779 954 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 FSTL1Q12841 308 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 PNOCQ13519 176 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 EAPPQ56P03 285 aaPredicted RBP3.28□□□□□ -1.88
LTN1-201ENST00000361371 TTC38Q5R3I4 469 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 GPC2Q8N158 579 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 MRPS27Q92552 414 aaKnown RBP3.28□□□□□ -1.88
LTN1-201ENST00000361371 RTN4Q9NQC3 1192 aaKnown RBP3.28□□□□□ -1.88
LTN1-201ENST00000361371 HPSEQ9Y251 543 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 ZHX2Q9Y6X8 837 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 LTBP3Q9NS15 1303 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 NFIBO00712 420 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 BMP3P12645 472 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 ZNF445P59923 1031 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 MTMR2Q13614 643 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 KARSQ15046 597 aaKnown RBP3.28□□□□□ -1.88
LTN1-201ENST00000361371 DPCR1Q3MIW9 517 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 SOGA3Q5TF21 947 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 MTMR14Q8NCE2 650 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 KIFC2Q96AC6 838 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 DHX58Q96C10 678 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 BLZF1Q9H2G9 400 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 CLSTN2Q9H4D0 955 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 VCPKMTQ9H867 229 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 RAVER2Q9HCJ3 691 aaKnown RBP3.28□□□□□ -1.88
LTN1-201ENST00000361371 COL20A1Q9P218 1284 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 ZNF536O15090 1300 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 AFDNP55196 1824 aaKnown RBP3.28□□□□□ -1.88
LTN1-201ENST00000361371 NPM3O75607 178 aaKnown RBP3.28□□□□□ -1.88
LTN1-201ENST00000361371 PLCB2Q00722 1185 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 DHX8Q14562 1220 aaKnown RBP3.28□□□□□ -1.88
LTN1-201ENST00000361371 ADALQ6DHV7 355 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 HPS3Q969F9 1004 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 ELP1O95163 1332 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 MYO3BQ8WXR4 1341 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 POTEMA6NI47 508 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 H7C1D1 291 aa3.28□□□□□ -1.88
LTN1-201ENST00000361371 USP2O75604 605 aaPredicted RBP3.28□□□□□ -1.88
LTN1-201ENST00000361371 KIF5BP33176 963 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms