RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 PP2D1A8MPX8 630 aa22.77■■□□□ 1.24
CHD1L-201ENST00000361293 USP17L5A8MUK1 530 aa22.77■■□□□ 1.24
CHD1L-201ENST00000361293 TOP1P11387 765 aaKnown RBP22.77■■□□□ 1.24
CHD1L-201ENST00000361293 PTPN14Q15678 1187 aa22.77■■□□□ 1.24
CHD1L-201ENST00000361293 VAT1LQ9HCJ6 419 aa22.77■■□□□ 1.24
CHD1L-201ENST00000361293 NOVP48745 357 aa22.77■■□□□ 1.24
CHD1L-201ENST00000361293 GABPAQ06546 454 aa22.77■■□□□ 1.24
CHD1L-201ENST00000361293 KARSQ15046 597 aaKnown RBP22.77■■□□□ 1.24
CHD1L-201ENST00000361293 NLGN1Q8N2Q7 840 aa22.77■■□□□ 1.24
CHD1L-201ENST00000361293 LZTS2Q9BRK4 669 aa22.77■■□□□ 1.24
CHD1L-201ENST00000361293 UBA5Q9GZZ9 404 aa22.77■■□□□ 1.24
CHD1L-201ENST00000361293 PPP1R3GB7ZBB8 358 aa22.76■■□□□ 1.23
CHD1L-201ENST00000361293 NPR1P16066 1061 aa22.76■■□□□ 1.23
CHD1L-201ENST00000361293 NAPAP54920 295 aa22.76■■□□□ 1.23
CHD1L-201ENST00000361293 EIF6P56537 245 aaKnown RBP22.76■■□□□ 1.23
CHD1L-201ENST00000361293 ZMYND12Q9H0C1 365 aa22.76■■□□□ 1.23
CHD1L-201ENST00000361293 COBLO75128 1261 aa22.76■■□□□ 1.23
CHD1L-201ENST00000361293 MMP10P09238 476 aa22.76■■□□□ 1.23
CHD1L-201ENST00000361293 AKR1B1P15121 316 aa22.76■■□□□ 1.23
CHD1L-201ENST00000361293 LONP1P36776 959 aaKnown RBP22.76■■□□□ 1.23
CHD1L-201ENST00000361293 DPP8Q6V1X1 898 aaPredicted RBP22.76■■□□□ 1.23
CHD1L-201ENST00000361293 PIGSQ96S52 555 aa22.76■■□□□ 1.23
CHD1L-201ENST00000361293 SYNRGQ9UMZ2 1314 aa22.76■■□□□ 1.23
CHD1L-201ENST00000361293 QSER1Q2KHR3 1735 aa22.75■■□□□ 1.23
CHD1L-201ENST00000361293 SLURP2P0DP57 97 aa22.75■■□□□ 1.23
CHD1L-201ENST00000361293 MSL1Q68DK7 614 aa22.75■■□□□ 1.23
CHD1L-201ENST00000361293 PPP1R13BQ96KQ4 1090 aa22.75■■□□□ 1.23
CHD1L-201ENST00000361293 FRMPD2Q68DX3 1309 aaPredicted RBP22.75■■□□□ 1.23
CHD1L-201ENST00000361293 GALNT17Q6IS24 598 aa22.75■■□□□ 1.23
CHD1L-201ENST00000361293 LRRC47Q8N1G4 583 aaKnown RBP22.75■■□□□ 1.23
CHD1L-201ENST00000361293 APTXQ7Z2E3 356 aaKnown RBP22.74■■□□□ 1.23
CHD1L-201ENST00000361293 TMX1Q9H3N1 280 aa22.74■■□□□ 1.23
CHD1L-201ENST00000361293 KCNQ5Q9NR82 932 aa22.74■■□□□ 1.23
CHD1L-201ENST00000361293 MTMR4Q9NYA4 1195 aa22.74■■□□□ 1.23
CHD1L-201ENST00000361293 PDHBP11177 359 aa22.74■■□□□ 1.23
CHD1L-201ENST00000361293 TBX2Q13207 712 aaPredicted RBP22.74■■□□□ 1.23
CHD1L-201ENST00000361293 MYH8P13535 1937 aa22.73■■□□□ 1.23
CHD1L-201ENST00000361293 SMCO2A6NFE2 343 aa22.73■■□□□ 1.23
CHD1L-201ENST00000361293 CTIFO43310 598 aaKnown RBP22.73■■□□□ 1.23
CHD1L-201ENST00000361293 APBA3O96018 575 aa22.73■■□□□ 1.23
CHD1L-201ENST00000361293 NAALADL2Q58DX5 795 aa22.73■■□□□ 1.23
CHD1L-201ENST00000361293 SPATA1Q5VX52 437 aa22.73■■□□□ 1.23
CHD1L-201ENST00000361293 RRP36Q96EU6 259 aaKnown RBP22.73■■□□□ 1.23
CHD1L-201ENST00000361293 USP40Q9NVE5 1235 aa22.73■■□□□ 1.23
CHD1L-201ENST00000361293 PAXBP1Q9Y5B6 917 aa22.73■■□□□ 1.23
CHD1L-201ENST00000361293 PLIN4Q96Q06 1357 aa22.73■■□□□ 1.23
CHD1L-201ENST00000361293 DTHD1Q6ZMT9 781 aa22.73■■□□□ 1.23
CHD1L-201ENST00000361293 TMEM139Q8IV31 216 aa22.73■■□□□ 1.23
CHD1L-201ENST00000361293 SUGT1Q9Y2Z0 365 aa22.73■■□□□ 1.23
CHD1L-201ENST00000361293 GTPBP6O43824 516 aaPredicted RBP22.72■■□□□ 1.23
CHD1L-201ENST00000361293 KCNJ6P48051 423 aa22.72■■□□□ 1.23
CHD1L-201ENST00000361293 DISC1Q9NRI5 854 aa22.72■■□□□ 1.23
CHD1L-201ENST00000361293 CTNND2Q9UQB3 1225 aa22.72■■□□□ 1.23
CHD1L-201ENST00000361293 NR1I3Q14994 352 aa22.72■■□□□ 1.23
CHD1L-201ENST00000361293 CDC42EP5Q6NZY7 148 aa22.72■■□□□ 1.23
CHD1L-201ENST00000361293 LRRC15Q8TF66 581 aa22.72■■□□□ 1.23
CHD1L-201ENST00000361293 PLIN2Q99541 437 aa22.72■■□□□ 1.23
CHD1L-201ENST00000361293 DBNDD1Q9H9R9 158 aa22.72■■□□□ 1.23
CHD1L-201ENST00000361293 A0A1B0GTH6 734 aa22.71■■□□□ 1.23
CHD1L-201ENST00000361293 PSDA5PKW4 1024 aaPredicted RBP22.71■■□□□ 1.23
CHD1L-201ENST00000361293 TEX33O43247 280 aa22.71■■□□□ 1.23
CHD1L-201ENST00000361293 STAT6P42226 847 aa22.71■■□□□ 1.23
CHD1L-201ENST00000361293 NFIAQ12857 509 aa22.71■■□□□ 1.23
CHD1L-201ENST00000361293 DHX8Q14562 1220 aaKnown RBP22.71■■□□□ 1.23
CHD1L-201ENST00000361293 SPECC1LQ69YQ0 1117 aa22.71■■□□□ 1.23
CHD1L-201ENST00000361293 CCDC112Q8NEF3 446 aa22.71■■□□□ 1.23
CHD1L-201ENST00000361293 SEC63Q9UGP8 760 aaKnown RBP22.71■■□□□ 1.23
CHD1L-201ENST00000361293 PCDHAC2Q9Y5I4 1007 aa22.71■■□□□ 1.23
CHD1L-201ENST00000361293 IGKV6D-41A0A0C4DH26 115 aa22.71■■□□□ 1.23
CHD1L-201ENST00000361293 PLSCR1O15162 318 aa22.71■■□□□ 1.23
CHD1L-201ENST00000361293 ALDH1B1P30837 517 aa22.71■■□□□ 1.23
CHD1L-201ENST00000361293 LETM2Q2VYF4 491 aa22.71■■□□□ 1.23
CHD1L-201ENST00000361293 CDKAL1Q5VV42 579 aa22.71■■□□□ 1.23
CHD1L-201ENST00000361293 APOBEC3HQ6NTF7 200 aaKnown RBP22.71■■□□□ 1.23
CHD1L-201ENST00000361293 PDCL3Q9H2J4 239 aa22.71■■□□□ 1.23
CHD1L-201ENST00000361293 RIOX1Q9H6W3 641 aa22.71■■□□□ 1.23
CHD1L-201ENST00000361293 SERPINB13Q9UIV8 391 aa22.71■■□□□ 1.23
CHD1L-201ENST00000361293 PDE6BP35913 854 aa22.7■■□□□ 1.22
CHD1L-201ENST00000361293 TXLNAP40222 546 aa22.7■■□□□ 1.22
CHD1L-201ENST00000361293 ADKP55263 362 aaKnown RBP22.7■■□□□ 1.22
CHD1L-201ENST00000361293 CT47A1Q5JQC4 288 aaPredicted RBP22.7■■□□□ 1.22
CHD1L-201ENST00000361293 RRAGBQ5VZM2 374 aa22.7■■□□□ 1.22
CHD1L-201ENST00000361293 TC2NQ8N9U0 490 aa22.7■■□□□ 1.22
CHD1L-201ENST00000361293 NRDCO43847 1150 aa22.7■■□□□ 1.22
CHD1L-201ENST00000361293 SHMT1P34896 483 aa22.7■■□□□ 1.22
CHD1L-201ENST00000361293 MASTLQ96GX5 879 aa22.7■■□□□ 1.22
CHD1L-201ENST00000361293 PYM1Q9BRP8 204 aaKnown RBP22.7■■□□□ 1.22
CHD1L-201ENST00000361293 TMEM260Q9NX78 707 aa22.7■■□□□ 1.22
CHD1L-201ENST00000361293 PARP3Q9Y6F1 533 aa22.7■■□□□ 1.22
CHD1L-201ENST00000361293 CCNT1O60563 726 aaKnown RBP22.69■■□□□ 1.22
CHD1L-201ENST00000361293 NONOQ15233 471 aaKnown RBP eCLIP22.69■■□□□ 1.22
CHD1L-201ENST00000361293 KRT25Q7Z3Z0 450 aa22.69■■□□□ 1.22
CHD1L-201ENST00000361293 ZFPM1Q8IX07 1006 aa22.69■■□□□ 1.22
CHD1L-201ENST00000361293 CCDC12Q8WUD4 166 aaPredicted RBP22.69■■□□□ 1.22
CHD1L-201ENST00000361293 ZNF622Q969S3 477 aaKnown RBP eCLIP22.69■■□□□ 1.226e-8■□□□□ 11.2
CHD1L-201ENST00000361293 C6orf50Q9HD87 102 aa22.69■■□□□ 1.22
CHD1L-201ENST00000361293 BIN2Q9UBW5 565 aaPredicted RBP22.69■■□□□ 1.22
CHD1L-201ENST00000361293 GDAQ9Y2T3 454 aa22.69■■□□□ 1.22
CHD1L-201ENST00000361293 RPN1P04843 607 aaKnown RBP22.69■■□□□ 1.22
CHD1L-201ENST00000361293 SMARCA1P28370 1054 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms