RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 RINT1Q6NUQ1 792 aa14.42□□□□□ -0.1
SRGAP3-201ENST00000360413 NME8Q8N427 588 aa14.42□□□□□ -0.1
SRGAP3-201ENST00000360413 TMEM63CQ9P1W3 806 aa14.42□□□□□ -0.1
SRGAP3-201ENST00000360413 GFAPP14136 432 aa14.42□□□□□ -0.1
SRGAP3-201ENST00000360413 SUPT20HQ8NEM7 779 aa14.42□□□□□ -0.1
SRGAP3-201ENST00000360413 SLC4A7Q9Y6M7 1214 aa14.42□□□□□ -0.1
SRGAP3-201ENST00000360413 GUCY2DQ02846 1103 aa14.42□□□□□ -0.1
SRGAP3-201ENST00000360413 SLC9C2Q5TAH2 1124 aa14.42□□□□□ -0.1
SRGAP3-201ENST00000360413 CCNT1O60563 726 aaKnown RBP14.42□□□□□ -0.1
SRGAP3-201ENST00000360413 FNBP4Q8N3X1 1017 aaPredicted RBP14.42□□□□□ -0.1
SRGAP3-201ENST00000360413 DPH5Q9H2P9 285 aa14.42□□□□□ -0.1
SRGAP3-201ENST00000360413 KIF22Q14807 665 aa14.42□□□□□ -0.1
SRGAP3-201ENST00000360413 PPARGP37231 505 aaPredicted RBP14.42□□□□□ -0.1
SRGAP3-201ENST00000360413 SLMAPQ14BN4 828 aa14.42□□□□□ -0.1
SRGAP3-201ENST00000360413 MYO1CO00159 1063 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 KRT81Q14533 505 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 HNRNPCL2B2RXH8 293 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 HNRNPCL1O60812 293 aaKnown RBP14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 PTPREP23469 700 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 PABPC4Q13310 644 aaKnown RBP eCLIP14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 BSPRYQ5W0U4 402 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 TADA2BQ86TJ2 420 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 DYDC2Q96IM9 177 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 hCG_2014768A0A024R1R8 64 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 TOM1O60784 492 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 RPS6KB1P23443 525 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 CAPN12Q6ZSI9 719 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 PPP1R13BQ96KQ4 1090 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 TMEM247A6NEH6 219 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 NEK2P51955 445 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 SEPT2Q15019 361 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 TMTC4Q5T4D3 741 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 HIBCHQ6NVY1 386 aaPredicted RBP14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 TRIML2Q8N7C3 387 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 SCYL1Q96KG9 808 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 HINFPQ9BQA5 517 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 DNM3Q9UQ16 869 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 ZNF711Q9Y462 761 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 MAP3K1Q13233 1512 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 PDHA1P08559 390 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 TNFAIP1Q13829 316 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 ZBTB3Q9H5J0 574 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 SLC8A2Q9UPR5 921 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 GNGT2O14610 69 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 DEXIO95424 95 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 CHMLP26374 656 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 GRM1Q13255 1194 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 HADHQ16836 314 aaKnown RBP14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 PLEKHM2Q8IWE5 1019 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 EXOC8Q8IYI6 725 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 FAM207AQ9NSI2 230 aaPredicted RBP14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 ZNF233A6NK53 670 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 EEF1GP26641 437 aaKnown RBP14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 TMEM87BQ96K49 555 aa14.41□□□□□ -0.1
SRGAP3-201ENST00000360413 MCF2L2Q86YR7 1114 aa14.4□□□□□ -0.1
SRGAP3-201ENST00000360413 PAWRQ96IZ0 340 aaKnown RBP14.4□□□□□ -0.1
SRGAP3-201ENST00000360413 ZNF219Q9P2Y4 722 aaPredicted RBP14.4□□□□□ -0.1
SRGAP3-201ENST00000360413 KDM2BQ8NHM5 1336 aa14.4□□□□□ -0.1
SRGAP3-201ENST00000360413 POLR3CQ9BUI4 534 aaPredicted RBP14.4□□□□□ -0.1
SRGAP3-201ENST00000360413 SLC13A4Q9UKG4 626 aa14.4□□□□□ -0.1
SRGAP3-201ENST00000360413 UHMK1Q8TAS1 419 aaKnown RBP14.4□□□□□ -0.1
SRGAP3-201ENST00000360413 CCHCR1Q8TD31 782 aa14.4□□□□□ -0.1
SRGAP3-201ENST00000360413 TTLL3Q9Y4R7 772 aa14.4□□□□□ -0.1
SRGAP3-201ENST00000360413 TTI1O43156 1089 aa14.4□□□□□ -0.1
SRGAP3-201ENST00000360413 BUB1O43683 1085 aa14.4□□□□□ -0.1
SRGAP3-201ENST00000360413 EIF6P56537 245 aaKnown RBP14.4□□□□□ -0.1
SRGAP3-201ENST00000360413 TRMT44Q8IYL2 757 aaKnown RBP14.4□□□□□ -0.1
SRGAP3-201ENST00000360413 SYNJ1O43426 1573 aa14.4□□□□□ -0.1
SRGAP3-201ENST00000360413 CTNND1O60716 968 aaKnown RBP14.4□□□□□ -0.1
SRGAP3-201ENST00000360413 MCF2P10911 925 aa14.4□□□□□ -0.1
SRGAP3-201ENST00000360413 CASP2P42575 452 aa14.4□□□□□ -0.1
SRGAP3-201ENST00000360413 LETM2Q2VYF4 491 aa14.4□□□□□ -0.1
SRGAP3-201ENST00000360413 CAPN9O14815 690 aa14.4□□□□□ -0.1
SRGAP3-201ENST00000360413 IFNB1P01574 187 aa14.4□□□□□ -0.1
SRGAP3-201ENST00000360413 KCNA4P22459 653 aa14.4□□□□□ -0.1
SRGAP3-201ENST00000360413 GNPTABQ3T906 1256 aa14.4□□□□□ -0.1
SRGAP3-201ENST00000360413 EDEM3Q9BZQ6 932 aa14.4□□□□□ -0.1
SRGAP3-201ENST00000360413 SPDYE16A6NNV3 312 aaPredicted RBP14.4□□□□□ -0.11
SRGAP3-201ENST00000360413 SPDYE2Q495Y8 402 aa14.4□□□□□ -0.11
SRGAP3-201ENST00000360413 KIAA2013Q8IYS2 634 aa14.4□□□□□ -0.11
SRGAP3-201ENST00000360413 CHUKO15111 745 aa14.39□□□□□ -0.11
SRGAP3-201ENST00000360413 XPOTO43592 962 aaKnown RBP14.39□□□□□ -0.11
SRGAP3-201ENST00000360413 TCP1P17987 556 aaKnown RBP14.39□□□□□ -0.11
SRGAP3-201ENST00000360413 NBPF10Q6P3W6 841 aaKnown RBP14.39□□□□□ -0.11
SRGAP3-201ENST00000360413 KIFC3Q9BVG8 833 aa14.39□□□□□ -0.11
SRGAP3-201ENST00000360413 ASXL1Q8IXJ9 1541 aa14.39□□□□□ -0.11
SRGAP3-201ENST00000360413 SERPINI2O75830 405 aa14.39□□□□□ -0.11
SRGAP3-201ENST00000360413 CPA1P15085 419 aa14.39□□□□□ -0.11
SRGAP3-201ENST00000360413 OR8K1Q8NGG5 319 aa14.39□□□□□ -0.11
SRGAP3-201ENST00000360413 SBNO1A3KN83 1393 aa14.39□□□□□ -0.11
SRGAP3-201ENST00000360413 OCA2Q04671 838 aa14.39□□□□□ -0.11
SRGAP3-201ENST00000360413 USHBP1Q8N6Y0 703 aa14.39□□□□□ -0.11
SRGAP3-201ENST00000360413 ADPGKQ9BRR6 497 aa14.39□□□□□ -0.11
SRGAP3-201ENST00000360413 SCAF11Q99590 1463 aaKnown RBP14.39□□□□□ -0.11
SRGAP3-201ENST00000360413 PNOCQ13519 176 aa14.39□□□□□ -0.11
SRGAP3-201ENST00000360413 SPZ1Q9BXG8 430 aa14.39□□□□□ -0.11
SRGAP3-201ENST00000360413 PAIP2BQ9ULR5 123 aaKnown RBP14.39□□□□□ -0.11
SRGAP3-201ENST00000360413 POTEB3A0JP26 581 aa14.39□□□□□ -0.11
SRGAP3-201ENST00000360413 PPP1R12AO14974 1030 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms