RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 SCAF8Q9UPN6 1271 aaKnown RBP15.98■□□□□ 0.15
PDLIM5-203ENST00000359265 CNPY2Q9Y2B0 182 aa15.98■□□□□ 0.15
PDLIM5-203ENST00000359265 USP17L5A8MUK1 530 aa15.97■□□□□ 0.15
PDLIM5-203ENST00000359265 UBE2Q2LH0YL09 131 aa15.97■□□□□ 0.15
PDLIM5-203ENST00000359265 FIBPO43427 364 aa15.97■□□□□ 0.15
PDLIM5-203ENST00000359265 MMP1P03956 469 aa15.97■□□□□ 0.15
PDLIM5-203ENST00000359265 SCG2P13521 617 aa15.97■□□□□ 0.15
PDLIM5-203ENST00000359265 PKN1Q16512 942 aa15.97■□□□□ 0.15
PDLIM5-203ENST00000359265 PKN2Q16513 984 aaKnown RBP15.97■□□□□ 0.15
PDLIM5-203ENST00000359265 PFKFB3Q16875 520 aaPredicted RBP15.97■□□□□ 0.15
PDLIM5-203ENST00000359265 CCDC96Q2M329 555 aa15.97■□□□□ 0.15
PDLIM5-203ENST00000359265 SHROOM1Q2M3G4 852 aaPredicted RBP15.97■□□□□ 0.15
PDLIM5-203ENST00000359265 GPATCH4Q5T3I0 446 aaKnown RBP15.97■□□□□ 0.15
PDLIM5-203ENST00000359265 NBPF12Q5TAG4 269 aaPredicted RBP15.97■□□□□ 0.15
PDLIM5-203ENST00000359265 USP17L2Q6R6M4 530 aa15.97■□□□□ 0.15
PDLIM5-203ENST00000359265 DCAF4Q8WV16 495 aa15.97■□□□□ 0.15
PDLIM5-203ENST00000359265 ZNF396Q96N95 335 aaPredicted RBP15.97■□□□□ 0.15
PDLIM5-203ENST00000359265 GJB4Q9NTQ9 266 aa15.97■□□□□ 0.15
PDLIM5-203ENST00000359265 LMBRD1Q9NUN5 540 aa15.97■□□□□ 0.15
PDLIM5-203ENST00000359265 FRMPD2Q68DX3 1309 aaPredicted RBP15.96■□□□□ 0.15
PDLIM5-203ENST00000359265 POTEFA5A3E0 1075 aa15.96■□□□□ 0.15
PDLIM5-203ENST00000359265 PRPF40AO75400 957 aaKnown RBP15.96■□□□□ 0.15
PDLIM5-203ENST00000359265 GOLGA8HP0CJ92 632 aa15.96■□□□□ 0.15
PDLIM5-203ENST00000359265 CAP2P40123 477 aa15.96■□□□□ 0.15
PDLIM5-203ENST00000359265 ZNF543Q08ER8 600 aa15.96■□□□□ 0.15
PDLIM5-203ENST00000359265 RRP1BQ14684 758 aaKnown RBP15.96■□□□□ 0.15
PDLIM5-203ENST00000359265 FAM173BQ6P4H8 233 aa15.96■□□□□ 0.15
PDLIM5-203ENST00000359265 RASGRP2Q7LDG7 609 aa15.96■□□□□ 0.15
PDLIM5-203ENST00000359265 hCG_1642624A0A1W2PR95 340 aa15.95■□□□□ 0.14
PDLIM5-203ENST00000359265 ADM5C9JUS6 153 aa15.95■□□□□ 0.14
PDLIM5-203ENST00000359265 TRAK2O60296 914 aa15.95■□□□□ 0.14
PDLIM5-203ENST00000359265 CTNND1O60716 968 aaKnown RBP15.95■□□□□ 0.14
PDLIM5-203ENST00000359265 ASNSP08243 561 aa15.95■□□□□ 0.14
PDLIM5-203ENST00000359265 JAG1P78504 1218 aa15.95■□□□□ 0.14
PDLIM5-203ENST00000359265 SLFN13Q68D06 897 aa15.95■□□□□ 0.14
PDLIM5-203ENST00000359265 FAM177A1Q8N128 213 aaPredicted RBP15.95■□□□□ 0.14
PDLIM5-203ENST00000359265 GMCL1P1Q8NEA9 526 aa15.95■□□□□ 0.14
PDLIM5-203ENST00000359265 RRP36Q96EU6 259 aaKnown RBP15.95■□□□□ 0.14
PDLIM5-203ENST00000359265 SCAND2PQ9GZW5 306 aaPredicted RBP15.95■□□□□ 0.14
PDLIM5-203ENST00000359265 SH2D4AQ9H788 454 aa15.95■□□□□ 0.14
PDLIM5-203ENST00000359265 GDPD2Q9HCC8 539 aa15.95■□□□□ 0.14
PDLIM5-203ENST00000359265 BRMS1Q9HCU9 246 aa15.95■□□□□ 0.14
PDLIM5-203ENST00000359265 VPS54Q9P1Q0 977 aa15.95■□□□□ 0.14
PDLIM5-203ENST00000359265 SEC63Q9UGP8 760 aaKnown RBP15.95■□□□□ 0.14
PDLIM5-203ENST00000359265 CFAP45Q9UL16 551 aa15.95■□□□□ 0.14
PDLIM5-203ENST00000359265 OTOFQ9HC10 1997 aa15.95■□□□□ 0.14
PDLIM5-203ENST00000359265 PHIPQ8WWQ0 1821 aa15.94■□□□□ 0.14
PDLIM5-203ENST00000359265 CYTH3O43739 400 aa15.94■□□□□ 0.14
PDLIM5-203ENST00000359265 PPP1R12BO60237 982 aaPredicted RBP15.94■□□□□ 0.14
PDLIM5-203ENST00000359265 MBD3O95983 291 aa15.94■□□□□ 0.14
PDLIM5-203ENST00000359265 SLC1A4P43007 532 aa15.94■□□□□ 0.14
PDLIM5-203ENST00000359265 ZNF157P51786 506 aaPredicted RBP15.94■□□□□ 0.14
PDLIM5-203ENST00000359265 DIS3L2Q8IYB7 885 aaKnown RBP15.94■□□□□ 0.14
PDLIM5-203ENST00000359265 CCDC148Q8NFR7 591 aa15.94■□□□□ 0.14
PDLIM5-203ENST00000359265 ZNF296Q8WUU4 475 aaPredicted RBP15.94■□□□□ 0.14
PDLIM5-203ENST00000359265 PIBF1Q8WXW3 757 aa15.94■□□□□ 0.14
PDLIM5-203ENST00000359265 CCDC102AQ96A19 550 aa15.94■□□□□ 0.14
PDLIM5-203ENST00000359265 PHF20Q9BVI0 1012 aa15.94■□□□□ 0.14
PDLIM5-203ENST00000359265 FOXP1Q9H334 677 aaPredicted RBP15.94■□□□□ 0.14
PDLIM5-203ENST00000359265 GPCPD1Q9NPB8 672 aa15.94■□□□□ 0.14
PDLIM5-203ENST00000359265 SH3GLB2Q9NR46 395 aa15.94■□□□□ 0.14
PDLIM5-203ENST00000359265 ISY1Q9ULR0 285 aaKnown RBP15.94■□□□□ 0.14
PDLIM5-203ENST00000359265 KCNJ14Q9UNX9 436 aa15.94■□□□□ 0.14
PDLIM5-203ENST00000359265 SSC5DA1L4H1 1573 aa15.94■□□□□ 0.14
PDLIM5-203ENST00000359265 PAPPA2Q9BXP8 1791 aa15.94■□□□□ 0.14
PDLIM5-203ENST00000359265 ELP1O95163 1332 aa15.94■□□□□ 0.14
PDLIM5-203ENST00000359265 PHF20L1A8MW92 1017 aa15.93■□□□□ 0.14
PDLIM5-203ENST00000359265 KIF28PB7ZC32 967 aa15.93■□□□□ 0.14
PDLIM5-203ENST00000359265 hCG_1984214I3L0E3 225 aa15.93■□□□□ 0.14
PDLIM5-203ENST00000359265 RAD21O60216 631 aa15.93■□□□□ 0.14
PDLIM5-203ENST00000359265 U2AF2P26368 475 aaKnown RBP eCLIP15.93■□□□□ 0.142e-7■■■■□ 19.5
PDLIM5-203ENST00000359265 KRT2P35908 639 aa15.93■□□□□ 0.14
PDLIM5-203ENST00000359265 SLC35G1Q2M3R5 365 aa15.93■□□□□ 0.14
PDLIM5-203ENST00000359265 MYSM1Q5VVJ2 828 aa15.93■□□□□ 0.14
PDLIM5-203ENST00000359265 PRAMEF18Q5VWM3 479 aa15.93■□□□□ 0.14
PDLIM5-203ENST00000359265 SIAH1Q8IUQ4 282 aa15.93■□□□□ 0.14
PDLIM5-203ENST00000359265 ZNF713Q8N859 430 aaPredicted RBP15.93■□□□□ 0.14
PDLIM5-203ENST00000359265 GMCL1Q96IK5 515 aa15.93■□□□□ 0.14
PDLIM5-203ENST00000359265 SPATA32Q96LK8 384 aa15.93■□□□□ 0.14
PDLIM5-203ENST00000359265 RIOX1Q9H6W3 641 aa15.93■□□□□ 0.14
PDLIM5-203ENST00000359265 GOPCQ9HD26 462 aa15.93■□□□□ 0.14
PDLIM5-203ENST00000359265 ZNF112Q9UJU3 913 aa15.93■□□□□ 0.14
PDLIM5-203ENST00000359265 DDX49Q9Y6V7 483 aaKnown RBP15.93■□□□□ 0.14
PDLIM5-203ENST00000359265 F5H6K3 240 aa15.92■□□□□ 0.14
PDLIM5-203ENST00000359265 NDUFB10O96000 172 aa15.92■□□□□ 0.14
PDLIM5-203ENST00000359265 CALML3P27482 149 aa15.92■□□□□ 0.14
PDLIM5-203ENST00000359265 NLRP5P59047 1200 aa15.92■□□□□ 0.14
PDLIM5-203ENST00000359265 KLRC3Q07444 240 aa15.92■□□□□ 0.14
PDLIM5-203ENST00000359265 KLHL40Q2TBA0 621 aa15.92■□□□□ 0.14
PDLIM5-203ENST00000359265 CCDC12Q8WUD4 166 aaPredicted RBP15.92■□□□□ 0.14
PDLIM5-203ENST00000359265 CDCA5Q96FF9 252 aa15.92■□□□□ 0.14
PDLIM5-203ENST00000359265 WRNIP1Q96S55 665 aa15.92■□□□□ 0.14
PDLIM5-203ENST00000359265 TFIP11Q9UBB9 837 aaKnown RBP15.92■□□□□ 0.14
PDLIM5-203ENST00000359265 TMX2Q9Y320 296 aa15.92■□□□□ 0.14
PDLIM5-203ENST00000359265 TBC1D8O95759 1140 aa15.91■□□□□ 0.14
PDLIM5-203ENST00000359265 SLC10A3P09131 477 aa15.91■□□□□ 0.14
PDLIM5-203ENST00000359265 IREB2P48200 963 aaKnown RBP15.91■□□□□ 0.14
PDLIM5-203ENST00000359265 UBE2HP62256 183 aa15.91■□□□□ 0.14
PDLIM5-203ENST00000359265 FBXO46Q6PJ61 603 aaPredicted RBP15.91■□□□□ 0.14
PDLIM5-203ENST00000359265 KCTD1Q719H9 257 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms