RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 DPH5Q9H2P9 285 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 PTPN21Q16825 1174 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 NOSTRINQ8IVI9 506 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 TEKT4Q8WW24 435 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 TRAF3IP3Q9Y228 551 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 MYH7P12883 1935 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 ANO9A1A5B4 782 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 LIN9Q5TKA1 542 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 PDP2Q9P2J9 529 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 RNF14Q9UBS8 474 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 SLCO1A2P46721 670 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 RCN2Q14257 317 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 DIS3L2Q8IYB7 885 aaKnown RBP6.66□□□□□ -1.34
VPS13B-203ENST00000358544 AFAP1Q8N556 730 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 ETAA1Q9NY74 926 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 DAAM1Q9Y4D1 1078 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 SCINQ9Y6U3 715 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 NOS1P29475 1434 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 MMEP08473 750 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 CALM1P0DP23 149 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 CALM2P0DP24 149 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 CALM3P0DP25 149 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 PSMD6Q15008 389 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 ARMCX5Q6P1M9 558 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 ZNF513Q8N8E2 541 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-203ENST00000358544 CNKSR2Q8WXI2 1034 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 DNAI2Q9GZS0 605 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 INTUQ9ULD6 942 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 PPIP5K1Q6PFW1 1433 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 NDC80O14777 642 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 ATF2P15336 505 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 C16orf87Q6PH81 154 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 C14orf93Q9H972 538 aaKnown RBP6.66□□□□□ -1.34
VPS13B-203ENST00000358544 NUB1Q9Y5A7 615 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 SBNO2Q9Y2G9 1366 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 KCNK3O14649 394 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 TFCP2Q12800 502 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 B4GALNT2Q8NHY0 566 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 ANKRD2Q9GZV1 360 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 ZNF287Q9HBT7 754 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 ATP5HO75947 161 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 DEXIO95424 95 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 NAPAP54920 295 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 IFIT1BQ5T764 474 aaKnown RBP6.66□□□□□ -1.34
VPS13B-203ENST00000358544 HS2ST1Q7LGA3 356 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 ZNF653Q96CK0 615 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 THOC1Q96FV9 657 aaKnown RBP6.66□□□□□ -1.34
VPS13B-203ENST00000358544 RUNDC3BQ96NL0 473 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 KIF2CQ99661 725 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 VIPAS39Q9H9C1 493 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 BUB1O43683 1085 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 ARHGEF25Q86VW2 580 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 RCOR1Q9UKL0 485 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 AMFRQ9UKV5 643 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 GMNCA6NCL1 334 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 TTC36A6NLP5 189 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 H0Y3Z8 333 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 TRPA1O75762 1119 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 SMTNP53814 917 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 RRP36Q96EU6 259 aaKnown RBP6.66□□□□□ -1.34
VPS13B-203ENST00000358544 PHACTR3Q96KR7 559 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 ATP6V0A4Q9HBG4 840 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 RETREG2Q8NC44 543 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 PIP4K2CQ8TBX8 421 aa6.66□□□□□ -1.34
VPS13B-203ENST00000358544 PPP1R1BQ9UD71 204 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-203ENST00000358544 FAM13AO94988 1023 aa6.65□□□□□ -1.34
VPS13B-203ENST00000358544 PLA2G4AP47712 749 aa6.65□□□□□ -1.34
VPS13B-203ENST00000358544 ANKRD20A4Q4UJ75 823 aa6.65□□□□□ -1.34
VPS13B-203ENST00000358544 SLC44A4Q53GD3 710 aa6.65□□□□□ -1.34
VPS13B-203ENST00000358544 ANKRD20A8PQ5CZ79 823 aa6.65□□□□□ -1.34
VPS13B-203ENST00000358544 DCAF17Q5H9S7 520 aaPredicted RBP6.65□□□□□ -1.34
VPS13B-203ENST00000358544 ANKRD20A2Q5SQ80 823 aa6.65□□□□□ -1.34
VPS13B-203ENST00000358544 ANKRD20A1Q5TYW2 823 aa6.65□□□□□ -1.34
VPS13B-203ENST00000358544 UHMK1Q8TAS1 419 aaKnown RBP6.65□□□□□ -1.34
VPS13B-203ENST00000358544 CHCHD3Q9NX63 227 aaKnown RBP6.65□□□□□ -1.34
VPS13B-203ENST00000358544 SNRNP200O75643 2136 aaKnown RBP6.65□□□□□ -1.34
VPS13B-203ENST00000358544 PGRMC1O00264 195 aaKnown RBP6.65□□□□□ -1.34
VPS13B-203ENST00000358544 PDE6CP51160 858 aa6.65□□□□□ -1.34
VPS13B-203ENST00000358544 EIF3BP55884 814 aaKnown RBP6.65□□□□□ -1.34
VPS13B-203ENST00000358544 CRYMQ14894 314 aa6.65□□□□□ -1.34
VPS13B-203ENST00000358544 ZNF449Q6P9G9 518 aa6.65□□□□□ -1.34
VPS13B-203ENST00000358544 AATFQ9NY61 560 aaKnown RBP eCLIP6.65□□□□□ -1.345e-6■■■■□ 19.3
VPS13B-203ENST00000358544 PCDHA5Q9Y5H7 936 aa6.65□□□□□ -1.34
VPS13B-203ENST00000358544 CLIC4Q9Y696 253 aa6.65□□□□□ -1.34
VPS13B-203ENST00000358544 IL15P40933 162 aaPredicted RBP6.65□□□□□ -1.34
VPS13B-203ENST00000358544 PPP4R1Q8TF05 950 aa6.65□□□□□ -1.34
VPS13B-203ENST00000358544 CTCFP49711 727 aaPredicted RBP6.65□□□□□ -1.34
VPS13B-203ENST00000358544 KRT24Q2M2I5 525 aa6.65□□□□□ -1.34
VPS13B-203ENST00000358544 MOV10L1Q9BXT6 1211 aaKnown RBP6.65□□□□□ -1.34
VPS13B-203ENST00000358544 C6orf50Q9HD87 102 aa6.65□□□□□ -1.34
VPS13B-203ENST00000358544 A0A0D9SFI3 127 aa6.65□□□□□ -1.34
VPS13B-203ENST00000358544 MOCS3O95396 460 aa6.65□□□□□ -1.34
VPS13B-203ENST00000358544 ESRRGP62508 458 aa6.65□□□□□ -1.34
VPS13B-203ENST00000358544 PDE4BQ07343 736 aa6.65□□□□□ -1.34
VPS13B-203ENST00000358544 MYO18BQ8IUG5 2567 aa6.65□□□□□ -1.34
VPS13B-203ENST00000358544 PPP2R2AP63151 447 aa6.65□□□□□ -1.34
VPS13B-203ENST00000358544 NEK9Q8TD19 979 aa6.65□□□□□ -1.34
VPS13B-203ENST00000358544 COG1Q8WTW3 980 aa6.65□□□□□ -1.34
VPS13B-203ENST00000358544 RESTQ13127 1097 aa6.65□□□□□ -1.35
VPS13B-203ENST00000358544 SNX1Q13596 522 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms