RNA–Protein interactions for RNA: ENST00000357508.5

C1orf228-201, Transcript of Uncharacterized protein C1orf228, humanhuman

TSL 1 (best)

Gene C1orf228, Length 2,113 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-201ENST00000357508 SERPINB13Q9UIV8 391 aa29.66■■■□□ 2.34
C1orf228-201ENST00000357508 MYO3BQ8WXR4 1341 aa29.66■■■□□ 2.34
C1orf228-201ENST00000357508 TERF1P54274 439 aa29.66■■■□□ 2.34
C1orf228-201ENST00000357508 IL17AQ16552 155 aa29.66■■■□□ 2.34
C1orf228-201ENST00000357508 C4orf32Q8N8J7 132 aa29.66■■■□□ 2.34
C1orf228-201ENST00000357508 SWAP70Q9UH65 585 aa29.66■■■□□ 2.34
C1orf228-201ENST00000357508 CCDC194A0A1B0GVG4 234 aa29.65■■■□□ 2.34
C1orf228-201ENST00000357508 CRKP46108 304 aa29.65■■■□□ 2.34
C1orf228-201ENST00000357508 ILDR2Q71H61 639 aa29.65■■■□□ 2.34
C1orf228-201ENST00000357508 LRRC8AQ8IWT6 810 aa29.65■■■□□ 2.34
C1orf228-201ENST00000357508 USP17L5A8MUK1 530 aa29.65■■■□□ 2.34
C1orf228-201ENST00000357508 SMC2O95347 1197 aa29.65■■■□□ 2.34
C1orf228-201ENST00000357508 ARL6IP4Q66PJ3 421 aaKnown RBP29.65■■■□□ 2.34
C1orf228-201ENST00000357508 RTKN2Q8IZC4 609 aa29.65■■■□□ 2.34
C1orf228-201ENST00000357508 CCDC34Q96HJ3 373 aa29.65■■■□□ 2.34
C1orf228-201ENST00000357508 CD2APQ9Y5K6 639 aa29.65■■■□□ 2.34
C1orf228-201ENST00000357508 PDHBP11177 359 aa29.64■■■□□ 2.34
C1orf228-201ENST00000357508 GRIPAP1Q4V328 841 aa29.64■■■□□ 2.34
C1orf228-201ENST00000357508 SUPT20HQ8NEM7 779 aa29.64■■■□□ 2.34
C1orf228-201ENST00000357508 RRP36Q96EU6 259 aaKnown RBP29.64■■■□□ 2.34
C1orf228-201ENST00000357508 ZMYND12Q9H0C1 365 aa29.64■■■□□ 2.34
C1orf228-201ENST00000357508 ATP1A3P13637 1013 aa29.63■■■□□ 2.33
C1orf228-201ENST00000357508 FKBP1AP62942 108 aaKnown RBP29.63■■■□□ 2.33
C1orf228-201ENST00000357508 FANCCQ00597 558 aa29.63■■■□□ 2.33
C1orf228-201ENST00000357508 ARID5BQ14865 1188 aa29.63■■■□□ 2.33
C1orf228-201ENST00000357508 MLKLQ8NB16 471 aa29.63■■■□□ 2.33
C1orf228-201ENST00000357508 ZDHHC15Q96MV8 337 aa29.63■■■□□ 2.33
C1orf228-201ENST00000357508 SHMT1P34896 483 aa29.63■■■□□ 2.33
C1orf228-201ENST00000357508 STRIP1Q5VSL9 837 aa29.63■■■□□ 2.33
C1orf228-201ENST00000357508 FILIP1Q7Z7B0 1213 aa29.63■■■□□ 2.33
C1orf228-201ENST00000357508 PAGE5Q96GU1 130 aa29.63■■■□□ 2.33
C1orf228-201ENST00000357508 ECE2O60344 883 aa29.62■■■□□ 2.33
C1orf228-201ENST00000357508 NEMFO60524 1076 aa29.62■■■□□ 2.33
C1orf228-201ENST00000357508 NFIAQ12857 509 aa29.62■■■□□ 2.33
C1orf228-201ENST00000357508 DNTTIP2Q5QJE6 756 aaKnown RBP29.62■■■□□ 2.33
C1orf228-201ENST00000357508 HOMER1Q86YM7 354 aa29.62■■■□□ 2.33
C1orf228-201ENST00000357508 CCDC12Q8WUD4 166 aaPredicted RBP29.62■■■□□ 2.33
C1orf228-201ENST00000357508 NAPAP54920 295 aa29.62■■■□□ 2.33
C1orf228-201ENST00000357508 DALRD3Q5D0E6 543 aaKnown RBP29.62■■■□□ 2.33
C1orf228-201ENST00000357508 DACT2Q5SW24 774 aa29.62■■■□□ 2.33
C1orf228-201ENST00000357508 PSMD1Q99460 953 aa29.62■■■□□ 2.33
C1orf228-201ENST00000357508 RIOX1Q9H6W3 641 aa29.62■■■□□ 2.33
C1orf228-201ENST00000357508 IMPACTQ9P2X3 320 aa29.62■■■□□ 2.33
C1orf228-201ENST00000357508 DACH1Q9UI36 760 aa29.62■■■□□ 2.33
C1orf228-201ENST00000357508 AFMP43652 599 aa29.61■■■□□ 2.33
C1orf228-201ENST00000357508 E2F4Q16254 413 aa29.61■■■□□ 2.33
C1orf228-201ENST00000357508 LRRC47Q8N1G4 583 aaKnown RBP29.61■■■□□ 2.33
C1orf228-201ENST00000357508 MRIQ9BWK5 157 aa29.61■■■□□ 2.33
C1orf228-201ENST00000357508 SEC63Q9UGP8 760 aaKnown RBP29.61■■■□□ 2.33
C1orf228-201ENST00000357508 PPIP5K2O43314 1243 aa29.6■■■□□ 2.33
C1orf228-201ENST00000357508 MYO1BO43795 1136 aa29.6■■■□□ 2.33
C1orf228-201ENST00000357508 HLA-DOAP06340 250 aa29.6■■■□□ 2.33
C1orf228-201ENST00000357508 INF2Q27J81 1249 aa29.6■■■□□ 2.33
C1orf228-201ENST00000357508 CLEC10AQ8IUN9 316 aa29.6■■■□□ 2.33
C1orf228-201ENST00000357508 KIAA0825Q8IV33 1275 aa29.6■■■□□ 2.33
C1orf228-201ENST00000357508 PIGSQ96S52 555 aa29.6■■■□□ 2.33
C1orf228-201ENST00000357508 SNHG28P0DPA3 235 aa29.6■■■□□ 2.33
C1orf228-201ENST00000357508 UBA5Q9GZZ9 404 aa29.6■■■□□ 2.33
C1orf228-201ENST00000357508 FANCLQ9NW38 375 aa29.6■■■□□ 2.33
C1orf228-201ENST00000357508 FRMPD2Q68DX3 1309 aaPredicted RBP29.6■■■□□ 2.33
C1orf228-201ENST00000357508 LONP1P36776 959 aaKnown RBP29.59■■■□□ 2.33
C1orf228-201ENST00000357508 EIF6P56537 245 aaKnown RBP29.59■■■□□ 2.33
C1orf228-201ENST00000357508 ASPRV1Q53RT3 343 aa29.59■■■□□ 2.33
C1orf228-201ENST00000357508 VAT1LQ9HCJ6 419 aa29.59■■■□□ 2.33
C1orf228-201ENST00000357508 PCDHAC2Q9Y5I4 1007 aa29.59■■■□□ 2.33
C1orf228-201ENST00000357508 TTLL1O95922 423 aa29.59■■■□□ 2.33
C1orf228-201ENST00000357508 TPM2P07951 284 aa29.59■■■□□ 2.33
C1orf228-201ENST00000357508 GSDMDP57764 484 aa29.59■■■□□ 2.33
C1orf228-201ENST00000357508 DPYDQ12882 1025 aa29.59■■■□□ 2.33
C1orf228-201ENST00000357508 PYM1Q9BRP8 204 aaKnown RBP29.59■■■□□ 2.33
C1orf228-201ENST00000357508 EHD4Q9H223 541 aa29.59■■■□□ 2.33
C1orf228-201ENST00000357508 HDLBPQ00341 1268 aaKnown RBP29.58■■■□□ 2.33
C1orf228-201ENST00000357508 FMR1Q06787 632 aaKnown RBP eCLIP29.58■■■□□ 2.33
C1orf228-201ENST00000357508 ZFPM1Q8IX07 1006 aa29.58■■■□□ 2.33
C1orf228-201ENST00000357508 IQUBQ8NA54 791 aa29.58■■■□□ 2.33
C1orf228-201ENST00000357508 C6orf50Q9HD87 102 aa29.58■■■□□ 2.33
C1orf228-201ENST00000357508 SMCO2A6NFE2 343 aa29.57■■■□□ 2.32
C1orf228-201ENST00000357508 SOGA3Q5TF21 947 aa29.57■■■□□ 2.32
C1orf228-201ENST00000357508 TMC6Q7Z403 805 aa29.57■■■□□ 2.32
C1orf228-201ENST00000357508 ZNF277Q9NRM2 450 aaPredicted RBP29.57■■■□□ 2.32
C1orf228-201ENST00000357508 CASP1P29466 404 aa29.57■■■□□ 2.32
C1orf228-201ENST00000357508 GNA11P29992 359 aa29.57■■■□□ 2.32
C1orf228-201ENST00000357508 KRT25Q7Z3Z0 450 aa29.57■■■□□ 2.32
C1orf228-201ENST00000357508 BRCA1P38398 1863 aaKnown RBP29.56■■■□□ 2.32
C1orf228-201ENST00000357508 PDXDC2PQ6P474 469 aa29.56■■■□□ 2.32
C1orf228-201ENST00000357508 ENOX1Q8TC92 643 aaKnown RBP29.56■■■□□ 2.32
C1orf228-201ENST00000357508 TMEM60Q9H2L4 133 aa29.56■■■□□ 2.32
C1orf228-201ENST00000357508 PSME4Q14997 1843 aa29.56■■■□□ 2.32
C1orf228-201ENST00000357508 CCZ1BP86790 482 aa29.56■■■□□ 2.32
C1orf228-201ENST00000357508 CCZ1P86791 482 aaPredicted RBP29.56■■■□□ 2.32
C1orf228-201ENST00000357508 DPF2Q92785 391 aa29.56■■■□□ 2.32
C1orf228-201ENST00000357508 GSDMAQ96QA5 445 aa29.56■■■□□ 2.32
C1orf228-201ENST00000357508 ESYT2A0FGR8 921 aa29.55■■■□□ 2.32
C1orf228-201ENST00000357508 hCG_1984214I3L0E3 225 aa29.55■■■□□ 2.32
C1orf228-201ENST00000357508 CBFA2T2O43439 604 aa29.55■■■□□ 2.32
C1orf228-201ENST00000357508 UBASH3AP57075 661 aa29.55■■■□□ 2.32
C1orf228-201ENST00000357508 ZNF713Q8N859 430 aaPredicted RBP29.55■■■□□ 2.32
C1orf228-201ENST00000357508 NLGN2Q8NFZ4 835 aa29.55■■■□□ 2.32
C1orf228-201ENST00000357508 SPON1Q9HCB6 807 aa29.55■■■□□ 2.32
C1orf228-201ENST00000357508 YDJCA8MPS7 323 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms