RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 TSEN34Q9BSV6 310 aaKnown RBP10.34□□□□□ -0.75
COL4A3BP-202ENST00000357457 KANSL2Q9H9L4 492 aa10.34□□□□□ -0.75
COL4A3BP-202ENST00000357457 FBXO28Q9NVF7 368 aa10.34□□□□□ -0.75
COL4A3BP-202ENST00000357457 ZNF214Q9UL59 606 aaPredicted RBP10.34□□□□□ -0.75
COL4A3BP-202ENST00000357457 PPP1R9AQ9ULJ8 1098 aa10.34□□□□□ -0.75
COL4A3BP-202ENST00000357457 MYH7P12883 1935 aa10.34□□□□□ -0.75
COL4A3BP-202ENST00000357457 ZBED9Q6R2W3 1325 aa10.33□□□□□ -0.76
COL4A3BP-202ENST00000357457 A0A1W2PQ45 241 aaPredicted RBP10.33□□□□□ -0.76
COL4A3BP-202ENST00000357457 A0A1W2PQY0 241 aa10.33□□□□□ -0.76
COL4A3BP-202ENST00000357457 RAB11FIP3O75154 756 aa10.33□□□□□ -0.76
COL4A3BP-202ENST00000357457 MBD4O95243 580 aa10.33□□□□□ -0.76
COL4A3BP-202ENST00000357457 PGK1P00558 417 aa10.33□□□□□ -0.76
COL4A3BP-202ENST00000357457 PGK2P07205 417 aa10.33□□□□□ -0.76
COL4A3BP-202ENST00000357457 IFIT2P09913 472 aaKnown RBP10.33□□□□□ -0.76
COL4A3BP-202ENST00000357457 ATP5JP18859 108 aa10.33□□□□□ -0.76
COL4A3BP-202ENST00000357457 COPB2P35606 906 aa10.33□□□□□ -0.76
COL4A3BP-202ENST00000357457 FAAP100Q0VG06 881 aa10.33□□□□□ -0.76
COL4A3BP-202ENST00000357457 KCTD2Q14681 263 aa10.33□□□□□ -0.76
COL4A3BP-202ENST00000357457 UBE3CQ15386 1083 aa10.33□□□□□ -0.76
COL4A3BP-202ENST00000357457 SLFNL1Q499Z3 407 aa10.33□□□□□ -0.76
COL4A3BP-202ENST00000357457 CCSAPQ6IQ19 270 aaPredicted RBP10.33□□□□□ -0.76
COL4A3BP-202ENST00000357457 MAMDC4Q6UXC1 1216 aa10.33□□□□□ -0.76
COL4A3BP-202ENST00000357457 ZNF467Q7Z7K2 595 aaPredicted RBP10.33□□□□□ -0.76
COL4A3BP-202ENST00000357457 SIRT2Q8IXJ6 389 aa10.33□□□□□ -0.76
COL4A3BP-202ENST00000357457 PANK1Q8TE04 598 aa10.33□□□□□ -0.76
COL4A3BP-202ENST00000357457 MYLIPQ8WY64 445 aa10.33□□□□□ -0.76
COL4A3BP-202ENST00000357457 DNAJC2Q99543 621 aaKnown RBP10.33□□□□□ -0.76
COL4A3BP-202ENST00000357457 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.33□□□□□ -0.76
COL4A3BP-202ENST00000357457 PAG1Q9NWQ8 432 aa10.33□□□□□ -0.76
COL4A3BP-202ENST00000357457 MCM3APO60318 1980 aa10.32□□□□□ -0.76
COL4A3BP-202ENST00000357457 CYP2D7A0A087X1C5 515 aa10.32□□□□□ -0.76
COL4A3BP-202ENST00000357457 AKR1A1P14550 325 aa10.32□□□□□ -0.76
COL4A3BP-202ENST00000357457 CTR9Q6PD62 1173 aa10.32□□□□□ -0.76
COL4A3BP-202ENST00000357457 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.32□□□□□ -0.76
COL4A3BP-202ENST00000357457 HAUS7Q99871 368 aa10.32□□□□□ -0.76
COL4A3BP-202ENST00000357457 BOLA2Q9H3K6 86 aa10.32□□□□□ -0.76
COL4A3BP-202ENST00000357457 GOPCQ9HD26 462 aa10.32□□□□□ -0.76
COL4A3BP-202ENST00000357457 CHD9Q3L8U1 2897 aa10.32□□□□□ -0.76
COL4A3BP-202ENST00000357457 GREB1LQ9C091 1923 aaPredicted RBP10.32□□□□□ -0.76
COL4A3BP-202ENST00000357457 SYNGAP1Q96PV0 1343 aa10.32□□□□□ -0.76
COL4A3BP-202ENST00000357457 CHD7Q9P2D1 2997 aa10.31□□□□□ -0.76
COL4A3BP-202ENST00000357457 DNAJC25-GNG10A0A024R161 153 aa10.31□□□□□ -0.76
COL4A3BP-202ENST00000357457 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.31□□□□□ -0.76
COL4A3BP-202ENST00000357457 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.31□□□□□ -0.76
COL4A3BP-202ENST00000357457 MOXD2PA6NHM9 499 aa10.31□□□□□ -0.76
COL4A3BP-202ENST00000357457 ATP2A1O14983 1001 aa10.31□□□□□ -0.76
COL4A3BP-202ENST00000357457 SNAI1O95863 264 aaPredicted RBP10.31□□□□□ -0.76
COL4A3BP-202ENST00000357457 CHGBP05060 677 aa10.31□□□□□ -0.76
COL4A3BP-202ENST00000357457 RAG1P15918 1043 aa10.31□□□□□ -0.76
COL4A3BP-202ENST00000357457 CDK7P50613 346 aa10.31□□□□□ -0.76
COL4A3BP-202ENST00000357457 ACLYP53396 1101 aa10.31□□□□□ -0.76
COL4A3BP-202ENST00000357457 AMOTL1Q8IY63 956 aa10.31□□□□□ -0.76
COL4A3BP-202ENST00000357457 NUP133Q8WUM0 1156 aa10.31□□□□□ -0.76
COL4A3BP-202ENST00000357457 RNPC3Q96LT9 517 aaKnown RBP10.31□□□□□ -0.76
COL4A3BP-202ENST00000357457 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.31□□□□□ -0.765e-7■■□□□ 11.5
COL4A3BP-202ENST00000357457 ZBTB40Q9NUA8 1239 aa10.31□□□□□ -0.76
COL4A3BP-202ENST00000357457 TMEM39AQ9NV64 488 aa10.31□□□□□ -0.76
COL4A3BP-202ENST00000357457 FAM184BQ9ULE4 1060 aa10.31□□□□□ -0.76
COL4A3BP-202ENST00000357457 CNPY2Q9Y2B0 182 aa10.31□□□□□ -0.76
COL4A3BP-202ENST00000357457 ELP1O95163 1332 aa10.31□□□□□ -0.76
COL4A3BP-202ENST00000357457 DCDC2CA8MYV0 355 aa10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 APBB1O00213 710 aa10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 PQBP1O60828 265 aaKnown RBP10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 DUSP11O75319 330 aaKnown RBP10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 HMMRO75330 724 aa10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 TIMP1P01033 207 aa10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 MS4A1P11836 297 aa10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 FOSL2P15408 326 aa10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 CST5P28325 142 aaPredicted RBP10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 FPGSQ05932 587 aa10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 GRIN2CQ14957 1233 aa10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 KCNA10Q16322 511 aa10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 SBK1Q52WX2 424 aa10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 FAM83BQ5T0W9 1011 aa10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 RASIP1Q5U651 963 aa10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 PRPF38AQ8NAV1 312 aaKnown RBP10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 SYMPKQ92797 1274 aaKnown RBP10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 DDRGK1Q96HY6 314 aa10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 TEX13BQ9BXU2 312 aa10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 PUS7LQ9H0K6 701 aaKnown RBP10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 PRDM6Q9NQX0 595 aa10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 STARD7Q9NQZ5 370 aa10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 NYAP2Q9P242 653 aa10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 TBX21Q9UL17 535 aa10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 RIPK3Q9Y572 518 aa10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 SLC4A4Q9Y6R1 1079 aa10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 XIRP2A4UGR9 3374 aa10.3□□□□□ -0.76
COL4A3BP-202ENST00000357457 MYH4Q9Y623 1939 aa10.29□□□□□ -0.76
COL4A3BP-202ENST00000357457 F5H6K3 240 aa10.29□□□□□ -0.76
COL4A3BP-202ENST00000357457 NKX3-2P78367 333 aa10.29□□□□□ -0.76
COL4A3BP-202ENST00000357457 HNRNPUQ00839 825 aaKnown RBP eCLIP10.29□□□□□ -0.76
COL4A3BP-202ENST00000357457 KLRC3Q07444 240 aa10.29□□□□□ -0.76
COL4A3BP-202ENST00000357457 MFSD5Q6N075 450 aa10.29□□□□□ -0.76
COL4A3BP-202ENST00000357457 ZSCAN25Q6NSZ9 544 aa10.29□□□□□ -0.76
COL4A3BP-202ENST00000357457 GIMAP6Q6P9H5 292 aa10.29□□□□□ -0.76
COL4A3BP-202ENST00000357457 C16orf59Q7L2K0 433 aa10.29□□□□□ -0.76
COL4A3BP-202ENST00000357457 ZNF579Q8NAF0 562 aaKnown RBP10.29□□□□□ -0.76
COL4A3BP-202ENST00000357457 MKL1Q969V6 931 aa10.29□□□□□ -0.76
COL4A3BP-202ENST00000357457 LENG1Q96BZ8 264 aaPredicted RBP10.29□□□□□ -0.76
COL4A3BP-202ENST00000357457 STRBPQ96SI9 672 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms