RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 IFIH1Q9BYX4 1025 aaKnown RBP7.64□□□□□ -1.19
RTN4-203ENST00000357376 CPVLQ9H3G5 476 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 HAUS4Q9H6D7 363 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 FAM204AQ9H8W3 233 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 SUGCTQ9HAC7 445 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 ABHD10Q9NUJ1 306 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 HDAC6Q9UBN7 1215 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 OVOS2A0A0G2JMS6 1433 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 UBR1Q8IWV7 1749 aa7.64□□□□□ -1.19
RTN4-203ENST00000357376 GOLGA6BA6NDN3 693 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 ATP8B1O43520 1251 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 USP17L8P0C7I0 530 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 CYP19A1P11511 503 aaPredicted RBP7.63□□□□□ -1.19
RTN4-203ENST00000357376 GNA11P29992 359 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 MAP3K9P80192 1104 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 PRPF4BQ13523 1007 aaKnown RBP7.63□□□□□ -1.19
RTN4-203ENST00000357376 CASP8Q14790 479 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 ALX1Q15699 326 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 NTRK3Q16288 839 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 TCP11X2Q5H9J9 407 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 RPGRQ92834 1020 aaKnown RBP7.63□□□□□ -1.19
RTN4-203ENST00000357376 DYNLL2Q96FJ2 89 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 BIN2Q9UBW5 565 aaPredicted RBP7.63□□□□□ -1.19
RTN4-203ENST00000357376 CDHR2Q9BYE9 1310 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 LOC102724428A0A0B4J2F2 783 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 GOLGA6CA6NDK9 693 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 ACTN4O43707 911 aaKnown RBP7.63□□□□□ -1.19
RTN4-203ENST00000357376 DDAH1O94760 285 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 TFRCP02786 760 aaKnown RBP7.63□□□□□ -1.19
RTN4-203ENST00000357376 GOLGA6DP0CG33 693 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 CXCR5P32302 372 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 SIK1P57059 783 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 NONOQ15233 471 aaKnown RBP eCLIP7.63□□□□□ -1.194e-8■■□□□ 12.2
RTN4-203ENST00000357376 ZNF658Q5TYW1 1059 aaPredicted RBP7.63□□□□□ -1.19
RTN4-203ENST00000357376 PLCD3Q8N3E9 789 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 CCDC43Q96MW1 224 aaKnown RBP7.63□□□□□ -1.19
RTN4-203ENST00000357376 GPCPD1Q9NPB8 672 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 GOLGA6AQ9NYA3 693 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 TRIM10Q9UDY6 481 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 XRN1Q8IZH2 1706 aaKnown RBP7.63□□□□□ -1.19
RTN4-203ENST00000357376 A0A1B0GTH6 734 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 ZNF76P36508 570 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 PRCPP42785 496 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 MAGEA1P43355 309 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 DNM2P50570 870 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 RPS8P62241 208 aaKnown RBP7.63□□□□□ -1.19
RTN4-203ENST00000357376 RAPGEF1Q13905 1077 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 NR1I3Q14994 352 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 ERFEQ4G0M1 354 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 TTC19Q6DKK2 380 aaPredicted RBP7.63□□□□□ -1.19
RTN4-203ENST00000357376 TRIM65Q6PJ69 517 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 TMTC3Q6ZXV5 915 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 LRP10Q7Z4F1 713 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 GSPT2Q8IYD1 628 aaKnown RBP7.63□□□□□ -1.19
RTN4-203ENST00000357376 CNOT6LQ96LI5 555 aaKnown RBP7.63□□□□□ -1.19
RTN4-203ENST00000357376 LRWD1Q9UFC0 647 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 RWDD2AQ9UIY3 292 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 TFR2Q9UP52 801 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 TNS3Q68CZ2 1445 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 SMCO2A6NFE2 343 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 BUB1O43683 1085 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 CD44P16070 742 aaKnown RBP7.63□□□□□ -1.19
RTN4-203ENST00000357376 BMP6P22004 513 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 PRDX5P30044 214 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 CDR1P51861 262 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 C8orf74Q6P047 294 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 CNNM4Q6P4Q7 775 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 NELFCDQ8IXH7 590 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 CHP1Q99653 195 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 NBPF3Q9H094 633 aa7.63□□□□□ -1.19
RTN4-203ENST00000357376 USP17L3A6NCW0 530 aa7.62□□□□□ -1.19
RTN4-203ENST00000357376 USP17L4A6NCW7 530 aa7.62□□□□□ -1.19
RTN4-203ENST00000357376 LONP1P36776 959 aaKnown RBP7.62□□□□□ -1.19
RTN4-203ENST00000357376 VAV2P52735 878 aa7.62□□□□□ -1.19
RTN4-203ENST00000357376 VSNL1P62760 191 aa7.62□□□□□ -1.19
RTN4-203ENST00000357376 CT47A1Q5JQC4 288 aaPredicted RBP7.62□□□□□ -1.19
RTN4-203ENST00000357376 TPTE2Q6XPS3 522 aa7.62□□□□□ -1.19
RTN4-203ENST00000357376 USP17L1Q7RTZ2 530 aa7.62□□□□□ -1.19
RTN4-203ENST00000357376 TEX11Q8IYF3 940 aa7.62□□□□□ -1.19
RTN4-203ENST00000357376 SNX29Q8TEQ0 813 aa7.62□□□□□ -1.19
RTN4-203ENST00000357376 PLA2G12BQ9BX93 195 aa7.62□□□□□ -1.19
RTN4-203ENST00000357376 ARPP21Q9UBL0 812 aaPredicted RBP7.62□□□□□ -1.19
RTN4-203ENST00000357376 ADD3Q9UEY8 706 aaKnown RBP7.62□□□□□ -1.19
RTN4-203ENST00000357376 RGPD8O14715 1765 aaPredicted RBP7.62□□□□□ -1.19
RTN4-203ENST00000357376 TTC26A0AVF1 554 aa7.62□□□□□ -1.19
RTN4-203ENST00000357376 KLRF2D3W0D1 207 aa7.62□□□□□ -1.19
RTN4-203ENST00000357376 EBAG9O00559 213 aa7.62□□□□□ -1.19
RTN4-203ENST00000357376 GNPATO15228 680 aa7.62□□□□□ -1.19
RTN4-203ENST00000357376 RNF40O75150 1001 aa7.62□□□□□ -1.19
RTN4-203ENST00000357376 TBC1D8O95759 1140 aa7.62□□□□□ -1.19
RTN4-203ENST00000357376 CYP2C19P33261 490 aa7.62□□□□□ -1.19
RTN4-203ENST00000357376 C2orf54Q08AI8 447 aa7.62□□□□□ -1.19
RTN4-203ENST00000357376 SMIM5Q71RC9 77 aa7.62□□□□□ -1.19
RTN4-203ENST00000357376 GOLGA5Q8TBA6 731 aa7.62□□□□□ -1.19
RTN4-203ENST00000357376 ATRIPQ8WXE1 791 aa7.62□□□□□ -1.19
RTN4-203ENST00000357376 GOPCQ9HD26 462 aa7.62□□□□□ -1.19
RTN4-203ENST00000357376 FAM217BQ9NTX9 383 aaPredicted RBP7.62□□□□□ -1.19
RTN4-203ENST00000357376 TCEAL9Q9UHQ7 104 aa7.62□□□□□ -1.19
RTN4-203ENST00000357376 JCADQ9P266 1359 aa7.62□□□□□ -1.19
RTN4-203ENST00000357376 ERVV-1B6SEH8 477 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms